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The map label for this gene is rutD [H]

Identifier: 146337595

GI number: 146337595

Start: 463109

End: 463927

Strand: Reverse

Name: rutD [H]

Synonym: BRADO0451

Alternate gene names: 146337595

Gene position: 463927-463109 (Counterclockwise)

Preceding gene: 146337596

Following gene: 146337590

Centisome position: 6.22

GC content: 68.74

Gene sequence:

>819_bases
ATGAGCAACGATGTCACCATTCACCGGCTGCAGACATCCTACGGCGAACTGGCCTGGCGCGAGGACGGAGCCGCCGGTGG
CGTGCCGCTGCTGCTGCTGCAGCGCTTTCGCGGCACGATGGATGACTGGGACCCGGCCTTCATCCAGGCGATCTCCGCCG
ATCGCCGCGTCATCCGCTTCGACAGCGCCGGCATCGGCCGCTCGGAAGGCGCCGTGCCCGATAGCATCGGCGGCATCGCC
GCCGTCGCAGCCGAAGTCATCAGCTCGCTCGGCCTCGGTCAGGCCGATGTGCTCGGCTGGTCGCTCGGTGGCGTCGTCGG
CCAGCAACTCGCGCTCGATGCGCCACATCTGGTGCGCCGGCTGATCGTGGCCGGCTCGAGCCCGGGACCGGTGGCGGACG
GGCCGCAGGCGCATCCGCGCGTCGCGCAGGTGATGACCAAGCCGGACAATGGTGCGGAGGATTTCCTCTTCCTGTTCTAT
CCGGAGACCGAGACCGCGGTGGCCGCCGGCCGTGCCTCGCTGGCGCGCATCGCCGCGCAGCCGCAGCTCGGGCCGAAGGT
GACCGCGGCATCGTTCATGGGACAGGTCAAGGCGATCTCGAGCTGGCCCGGCGTGCTGCACCGGGCCAACGAGCTGCGGC
TGCCGATGCTGGTGGCCAATGGCGCGCATGACGTGATGCTGCCGGCGTACCGCTCCTACGTGTTGTCGCAGCAGGCGCCC
AACGCCAAGCTCGTGCTCTATCCGGATGCCGGCCACGCTTTCCTGTTCCAGGAGATCGACGACTTCGCCGCCGAGGTCGA
CAGGTTTCTCAGCAAGTAA

Upstream 100 bases:

>100_bases
AGCGGCATACGAGACGACCTGATTCGCCGCCTCTGTGTCATTTGAGACATTTCTATCACCTCTTACGCTCTCCCCATCGG
ATAGTCCGAGGAGAGAGATG

Downstream 100 bases:

>100_bases
TCGAGCGGCATCCCGGCAGGCTTGTGCCGGGATGCTCTCGTCTCAGACGCCGAGCTTCGCCTTCGCCAGCGGCAGGCTGC
GCACATGCCGCCCGGTCAGC

Product: putative alpha/beta hydrolase

Products: NA

Alternate protein names: Aminohydrolase [H]

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MSNDVTIHRLQTSYGELAWREDGAAGGVPLLLLQRFRGTMDDWDPAFIQAISADRRVIRFDSAGIGRSEGAVPDSIGGIA
AVAAEVISSLGLGQADVLGWSLGGVVGQQLALDAPHLVRRLIVAGSSPGPVADGPQAHPRVAQVMTKPDNGAEDFLFLFY
PETETAVAAGRASLARIAAQPQLGPKVTAASFMGQVKAISSWPGVLHRANELRLPMLVANGAHDVMLPAYRSYVLSQQAP
NAKLVLYPDAGHAFLFQEIDDFAAEVDRFLSK

Sequences:

>Translated_272_residues
MSNDVTIHRLQTSYGELAWREDGAAGGVPLLLLQRFRGTMDDWDPAFIQAISADRRVIRFDSAGIGRSEGAVPDSIGGIA
AVAAEVISSLGLGQADVLGWSLGGVVGQQLALDAPHLVRRLIVAGSSPGPVADGPQAHPRVAQVMTKPDNGAEDFLFLFY
PETETAVAAGRASLARIAAQPQLGPKVTAASFMGQVKAISSWPGVLHRANELRLPMLVANGAHDVMLPAYRSYVLSQQAP
NAKLVLYPDAGHAFLFQEIDDFAAEVDRFLSK
>Mature_271_residues
SNDVTIHRLQTSYGELAWREDGAAGGVPLLLLQRFRGTMDDWDPAFIQAISADRRVIRFDSAGIGRSEGAVPDSIGGIAA
VAAEVISSLGLGQADVLGWSLGGVVGQQLALDAPHLVRRLIVAGSSPGPVADGPQAHPRVAQVMTKPDNGAEDFLFLFYP
ETETAVAAGRASLARIAAQPQLGPKVTAASFMGQVKAISSWPGVLHRANELRLPMLVANGAHDVMLPAYRSYVLSQQAPN
AKLVLYPDAGHAFLFQEIDDFAAEVDRFLSK

Specific function: May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation [H]

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Hydrolase RutD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR019913 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 28890; Mature: 28759

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNDVTIHRLQTSYGELAWREDGAAGGVPLLLLQRFRGTMDDWDPAFIQAISADRRVIRF
CCCCEEEEEECCCCCCEEECCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEE
DSAGIGRSEGAVPDSIGGIAAVAAEVISSLGLGQADVLGWSLGGVVGQQLALDAPHLVRR
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
LIVAGSSPGPVADGPQAHPRVAQVMTKPDNGAEDFLFLFYPETETAVAAGRASLARIAAQ
HHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCC
PQLGPKVTAASFMGQVKAISSWPGVLHRANELRLPMLVANGAHDVMLPAYRSYVLSQQAP
CCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCC
NAKLVLYPDAGHAFLFQEIDDFAAEVDRFLSK
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SNDVTIHRLQTSYGELAWREDGAAGGVPLLLLQRFRGTMDDWDPAFIQAISADRRVIRF
CCCEEEEEECCCCCCEEECCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEE
DSAGIGRSEGAVPDSIGGIAAVAAEVISSLGLGQADVLGWSLGGVVGQQLALDAPHLVRR
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
LIVAGSSPGPVADGPQAHPRVAQVMTKPDNGAEDFLFLFYPETETAVAAGRASLARIAAQ
HHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCC
PQLGPKVTAASFMGQVKAISSWPGVLHRANELRLPMLVANGAHDVMLPAYRSYVLSQQAP
CCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCC
NAKLVLYPDAGHAFLFQEIDDFAAEVDRFLSK
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA