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The map label for this gene is glxA [H]

Identifier: 146337596

GI number: 146337596

Start: 464006

End: 464974

Strand: Reverse

Name: glxA [H]

Synonym: BRADO0452

Alternate gene names: 146337596

Gene position: 464974-464006 (Counterclockwise)

Preceding gene: 146337611

Following gene: 146337595

Centisome position: 6.24

GC content: 68.42

Gene sequence:

>969_bases
ATGCGCCAAATCGGGTTCATCATGGAGGACGGCTTCCAGATCATGGGCGTGGCTGCCGCGACGGCGTTCGAGTTCGCCAA
CATCCAGTTGGGCGAGAAGGCCTATCGCGTCAGGATCATGTCGGAGAAAGGCGGCCCTATCCGCTCGACCCTCGGCATGC
ATGTCGAAACCGAGCCGCTCGGCGACTTTCCCGACACGCTGATGGTCGTCGGCGAACTGCTGCCGAAGCCGTCCACCGCC
GGCCTGCGGGCCTACATCGCGGAAGCCGGGCAGAAGTCGCGCCGCGTCGCCGGCGTCTGCACCGGCGCGTTCCTGCTCGC
CGAGGCCGGCCTGCTCGACGGCCGCAGCGCCACGACGCATTGGGCGCATGCCGCCGAATTGCAGCAGCGGTTTCCGTCCG
TCAAAGTCGACGACGACCGCATCTTCATCGCCGACGGCAACATCTGGACATCGGCCGGCATGACGGCCGGAATCGATCTC
GTGCTGGCGCTGATCGAGGACGACCACGGCGCGGAGATGTCGCGCGCGGTGGCGCGGCGGCTCGTGGTGTATCATCGCAG
GCCGGGAGGCCAGTCGCAGTTCTCGGCGCTGCTGGAGCTTGAGCCGCGCTCCGACCGGGTGCGGCGGGCGCTCACCTACG
CCAAGGAGAATCTGCGCAATCCGCTCAGCGTCGAGGAACTGGCGGAGGCGGCGAGTCTCAGCCCGCGTCAATTCAGCCGG
ATCTTCCGCGAGGAGACCGGGCAATCGCCGGCCAAGGCGGTTGAGCGGCTGCGGCTGGAGGCCGCCAAGGTGATGCTTGA
GGACGGCCGGCATTCCCTCGACATCGTCGCCCGCGACACCGGCTTCGCCGACCGCGACCGCATGCGCCGCGCCTTCCTGC
GCTTCTTCGGCCAGCCGCCGCAAAGCCTGCGCCGCAGCCTGCGGCTGATGGAAGGCGAGCCTGGCGAAGCGGCATACGAG
ACGACCTGA

Upstream 100 bases:

>100_bases
GCTGCGGGCGCTCGGTCTGTTGCGTTACGAGAAAGTAGAGCTGGATTTCCGCGTCTCAAATGCCATATAAACGTCAAATC
GGGACAAGGATGGTATCGCC

Downstream 100 bases:

>100_bases
TTCGCCGCCTCTGTGTCATTTGAGACATTTCTATCACCTCTTACGCTCTCCCCATCGGATAGTCCGAGGAGAGAGATGAT
GAGCAACGATGTCACCATTC

Product: bifunctional glutamine amidotransferase-like/transcriptional regulator protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MRQIGFIMEDGFQIMGVAAATAFEFANIQLGEKAYRVRIMSEKGGPIRSTLGMHVETEPLGDFPDTLMVVGELLPKPSTA
GLRAYIAEAGQKSRRVAGVCTGAFLLAEAGLLDGRSATTHWAHAAELQQRFPSVKVDDDRIFIADGNIWTSAGMTAGIDL
VLALIEDDHGAEMSRAVARRLVVYHRRPGGQSQFSALLELEPRSDRVRRALTYAKENLRNPLSVEELAEAASLSPRQFSR
IFREETGQSPAKAVERLRLEAAKVMLEDGRHSLDIVARDTGFADRDRMRRAFLRFFGQPPQSLRRSLRLMEGEPGEAAYE
TT

Sequences:

>Translated_322_residues
MRQIGFIMEDGFQIMGVAAATAFEFANIQLGEKAYRVRIMSEKGGPIRSTLGMHVETEPLGDFPDTLMVVGELLPKPSTA
GLRAYIAEAGQKSRRVAGVCTGAFLLAEAGLLDGRSATTHWAHAAELQQRFPSVKVDDDRIFIADGNIWTSAGMTAGIDL
VLALIEDDHGAEMSRAVARRLVVYHRRPGGQSQFSALLELEPRSDRVRRALTYAKENLRNPLSVEELAEAASLSPRQFSR
IFREETGQSPAKAVERLRLEAAKVMLEDGRHSLDIVARDTGFADRDRMRRAFLRFFGQPPQSLRRSLRLMEGEPGEAAYE
TT
>Mature_322_residues
MRQIGFIMEDGFQIMGVAAATAFEFANIQLGEKAYRVRIMSEKGGPIRSTLGMHVETEPLGDFPDTLMVVGELLPKPSTA
GLRAYIAEAGQKSRRVAGVCTGAFLLAEAGLLDGRSATTHWAHAAELQQRFPSVKVDDDRIFIADGNIWTSAGMTAGIDL
VLALIEDDHGAEMSRAVARRLVVYHRRPGGQSQFSALLELEPRSDRVRRALTYAKENLRNPLSVEELAEAASLSPRQFSR
IFREETGQSPAKAVERLRLEAAKVMLEDGRHSLDIVARDTGFADRDRMRRAFLRFFGQPPQSLRRSLRLMEGEPGEAAYE
TT

Specific function: This Protein Controls The Expression Of At Least Six Genes That Are Involved In The Transport And Catabolism Of L-Arabinose. It Regulates Initiation Of Transcription Of The Arabad Operon And It Also Controls Its Own Synthesis. The L- Arabinose Operon Dis

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 35616; Mature: 35616

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQIGFIMEDGFQIMGVAAATAFEFANIQLGEKAYRVRIMSEKGGPIRSTLGMHVETEPL
CCCCCCCHHCCCCEEHHHHHHHHHHHCCEECCCEEEEEEECCCCCCHHHHHCCEEECCCC
GDFPDTLMVVGELLPKPSTAGLRAYIAEAGQKSRRVAGVCTGAFLLAEAGLLDGRSATTH
CCCHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
WAHAAELQQRFPSVKVDDDRIFIADGNIWTSAGMTAGIDLVLALIEDDHGAEMSRAVARR
HHHHHHHHHHCCCCEECCCEEEEECCCEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
LVVYHRRPGGQSQFSALLELEPRSDRVRRALTYAKENLRNPLSVEELAEAASLSPRQFSR
HHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHH
IFREETGQSPAKAVERLRLEAAKVMLEDGRHSLDIVARDTGFADRDRMRRAFLRFFGQPP
HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCH
QSLRRSLRLMEGEPGEAAYETT
HHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRQIGFIMEDGFQIMGVAAATAFEFANIQLGEKAYRVRIMSEKGGPIRSTLGMHVETEPL
CCCCCCCHHCCCCEEHHHHHHHHHHHCCEECCCEEEEEEECCCCCCHHHHHCCEEECCCC
GDFPDTLMVVGELLPKPSTAGLRAYIAEAGQKSRRVAGVCTGAFLLAEAGLLDGRSATTH
CCCHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
WAHAAELQQRFPSVKVDDDRIFIADGNIWTSAGMTAGIDLVLALIEDDHGAEMSRAVARR
HHHHHHHHHHCCCCEECCCEEEEECCCEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
LVVYHRRPGGQSQFSALLELEPRSDRVRRALTYAKENLRNPLSVEELAEAASLSPRQFSR
HHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHH
IFREETGQSPAKAVERLRLEAAKVMLEDGRHSLDIVARDTGFADRDRMRRAFLRFFGQPP
HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCH
QSLRRSLRLMEGEPGEAAYETT
HHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]