Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
---|---|
Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is sam [H]
Identifier: 146337578
GI number: 146337578
Start: 444556
End: 445473
Strand: Direct
Name: sam [H]
Synonym: BRADO0433
Alternate gene names: 146337578
Gene position: 444556-445473 (Clockwise)
Preceding gene: 146337566
Following gene: 146337582
Centisome position: 5.96
GC content: 67.43
Gene sequence:
>918_bases ATGAGCGTGCTCTCCCGAATCTCCACCGCCAATGACGAGCGCTCGGCGCGGCTGGCCGGCATCGGCCTGATGCTGCTGTC GATTGCGATGTTCTCGTTCGGCGATGCCCTGGGCAAGTTCCTGGTCTCGACCTATGCCGTCGGCCAGCTGTTGTGGCTGC GCGCCTGCGCGGCGCTGCTGCTGCTCGCGCCGTTCATCTGGCGCAACCGCGCGGCGTTCGTGCAACTCGAACGACCCTGG CTGCAGCTGGTGCGCGTGATCCTGTCGACGCTCGAGGTCGCGGCGTTCTTCCTCGCGACCGTCTATCTGCCGCTCGCCGA CGTCATCACCTACTATCTTGCCGGTCCGATCTTCGTCACCGCGCTGTCGGCGCTGGTCCTGCGCGAGCATGTCGGCTGGC GGCGCTGGACCGCGATCCTGATCGGCTTCTGCGGCGTGCTGATTGCGCTCCGTCCGTCGGCGCAGACCTTCAGCCTGCCG GCTCTGATCGCGCTCGGCGGCAGCCTCTCCTTCGCGGTGCTGATGCTGATCACGCGCAGCCTGCGCGCGACGCCCGACAT CGTGATGGCGTCGTCGCAATTCGTCGGCACCTTCCTGCTGGGTGCCGCGATGTCCGCCTTCGGCTGGGTGACGCCGACGC CCGGCAGCCTCGTGATGTTCGCCGCCGCCGGGCTGATCTCGGTGACGGCGCTGTTCTGCGTCAACCGCTCGCTGAAGCTC GCGCCGGCCTCGGTGGTCGTGCCCTACCAGTACACGATGATCGTCTGGGCCGTGCTGTTCGGCTTCGTCGTGTTCGGCGA CGTTCCGCATCCCGCGACGATCATCGGCGCGATCATCATCATCGGCGCCGGCCTCTACATCTACTTGCGCGAACGCAGCC TGGGGCAGGGCGCTGGTTCCGTGAATCCGCCCGTCTAG
Upstream 100 bases:
>100_bases GGGATGGACAAGGCTTGCGCAGGGGTTGCGGCAGGGCTGCGTGACGCTTTCAGCCGAAGGGCTGGAGCGCCGGCAGTGCG CCTGATAAGGCAGCCCGATC
Downstream 100 bases:
>100_bases CGGTATCCACCGCTGTCGTCCCTGCGAACGCAGGGACCCCTACCGCGGAAGCTATCGAGGGAACGTGGCTGGCAGTTGCG TGCCTCAATACGGCCGGTGG
Product: DMT family permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MSVLSRISTANDERSARLAGIGLMLLSIAMFSFGDALGKFLVSTYAVGQLLWLRACAALLLLAPFIWRNRAAFVQLERPW LQLVRVILSTLEVAAFFLATVYLPLADVITYYLAGPIFVTALSALVLREHVGWRRWTAILIGFCGVLIALRPSAQTFSLP ALIALGGSLSFAVLMLITRSLRATPDIVMASSQFVGTFLLGAAMSAFGWVTPTPGSLVMFAAAGLISVTALFCVNRSLKL APASVVVPYQYTMIVWAVLFGFVVFGDVPHPATIIGAIIIIGAGLYIYLRERSLGQGAGSVNPPV
Sequences:
>Translated_305_residues MSVLSRISTANDERSARLAGIGLMLLSIAMFSFGDALGKFLVSTYAVGQLLWLRACAALLLLAPFIWRNRAAFVQLERPW LQLVRVILSTLEVAAFFLATVYLPLADVITYYLAGPIFVTALSALVLREHVGWRRWTAILIGFCGVLIALRPSAQTFSLP ALIALGGSLSFAVLMLITRSLRATPDIVMASSQFVGTFLLGAAMSAFGWVTPTPGSLVMFAAAGLISVTALFCVNRSLKL APASVVVPYQYTMIVWAVLFGFVVFGDVPHPATIIGAIIIIGAGLYIYLRERSLGQGAGSVNPPV >Mature_304_residues SVLSRISTANDERSARLAGIGLMLLSIAMFSFGDALGKFLVSTYAVGQLLWLRACAALLLLAPFIWRNRAAFVQLERPWL QLVRVILSTLEVAAFFLATVYLPLADVITYYLAGPIFVTALSALVLREHVGWRRWTAILIGFCGVLIALRPSAQTFSLPA LIALGGSLSFAVLMLITRSLRATPDIVMASSQFVGTFLLGAAMSAFGWVTPTPGSLVMFAAAGLISVTALFCVNRSLKLA PASVVVPYQYTMIVWAVLFGFVVFGDVPHPATIIGAIIIIGAGLYIYLRERSLGQGAGSVNPPV
Specific function: Transports S-adenosylmethionine [H]
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 32685; Mature: 32554
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVLSRISTANDERSARLAGIGLMLLSIAMFSFGDALGKFLVSTYAVGQLLWLRACAALL CCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLAPFIWRNRAAFVQLERPWLQLVRVILSTLEVAAFFLATVYLPLADVITYYLAGPIFVT HHHHHHHCCCHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALSALVLREHVGWRRWTAILIGFCGVLIALRPSAQTFSLPALIALGGSLSFAVLMLITRS HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHCCHHHHHHHHHHHHH LRATPDIVMASSQFVGTFLLGAAMSAFGWVTPTPGSLVMFAAAGLISVTALFCVNRSLKL HCCCCCCEEECHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEE APASVVVPYQYTMIVWAVLFGFVVFGDVPHPATIIGAIIIIGAGLYIYLRERSLGQGAGS CCCEEEECHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHEEEECCCCCCCCCC VNPPV CCCCC >Mature Secondary Structure SVLSRISTANDERSARLAGIGLMLLSIAMFSFGDALGKFLVSTYAVGQLLWLRACAALL CHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLAPFIWRNRAAFVQLERPWLQLVRVILSTLEVAAFFLATVYLPLADVITYYLAGPIFVT HHHHHHHCCCHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALSALVLREHVGWRRWTAILIGFCGVLIALRPSAQTFSLPALIALGGSLSFAVLMLITRS HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHCCHHHHHHHHHHHHH LRATPDIVMASSQFVGTFLLGAAMSAFGWVTPTPGSLVMFAAAGLISVTALFCVNRSLKL HCCCCCCEEECHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEE APASVVVPYQYTMIVWAVLFGFVVFGDVPHPATIIGAIIIIGAGLYIYLRERSLGQGAGS CCCEEEECHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHEEEECCCCCCCCCC VNPPV CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]