Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is cya3 [H]
Identifier: 146337566
GI number: 146337566
Start: 431384
End: 433051
Strand: Direct
Name: cya3 [H]
Synonym: BRADO0421
Alternate gene names: 146337566
Gene position: 431384-433051 (Clockwise)
Preceding gene: 146337565
Following gene: 146337578
Centisome position: 5.79
GC content: 69.54
Gene sequence:
>1668_bases ATGGCAGGGCAGATCGTCTTGAAGCGCAAGATTGCCGCGATATTCGCAGCTGACATTGCAGGCTACTCCCGCCTCGTCGC CGAGGATGAAGAAGAGACGCTGCGGCGTCTGGCGGCCTATCGCGAGGTCGTCGACGACTTCATCGCCCGGGCCGGCGGCC GCATCTTCAACACTGCCGGCGACGCCGTGCTTGCGGAGTTTCCGAGCGCCGTCGAGGCGGTGCGCTGCGCGATCGACATC CAGGAGAGCCTGCGCACGCGCAACATGGCTTATCCGCCGAGCCGCCAGATGAGCTACCGCATCGGCATCACCATCGGCGA CGTCGTCGAGCGCGACGGTGATCTGCTCGGCGACGGTGTGAACATCGCCGCACGGCTCGAGGGCCTCGCCGATGTCGGCG GCATCTGCATCTCGCGCGCGGTGCACGAGCAGGTCGCCAACAAGCTGTCGGTGCAATTCGCCGACATGGGCGCCCGCGAG GTCAAAAACATCCCGACGCCGGTGCACGCCTATCGCGTGGCGATGCGCCGCGAGGACGGCACCTACGCGGCGCCCCAGGA CAAGACCAAGCCCCCGTCTGTCGCCAAACGCCTGCTCAAGGCCGGCGTCGCCATTGTCGTCCTGATGGTTGCGGTCGGCG TCGGAACAGCGCTCTACCTCGATCACCGCGATCCGCCGTCGTCGCAGCCGGATGCCGCCAAGTCCGCGGCGGCGGCGCTG TCGCGGTTGTCGGCGAAGCCGGGTTCATCCGGCGGTGCCACATCGCCGGTCTCGCTGTCTCCCGAGCCCGCGGCAGCGAC GCCCGCGCCGCAGCCCTCGGCCCAACCCTCGCCGATCGTCACGGCCGAAAAATTCGTGCCCGACGCCGTGCCGTTCGTCG GCGAGCGCACCCGTATCGCGCTGGCGCGCGACTATGTTCCGGCGCCGGGCGCCAAGGCGTTCGCGACCACTGTCAACGGC GTCAGCGCCTACGTCACGGGGCAGCCGAGCGAAGAGGCGGCCAAGGCCGCGGCGTTGGAGCAGTGTCACCAGCGCGCCGA GTCCTCGACCAGCTTGCATAAATGCGAGCTCTATGCGGTCGGCGACACCATCGTCTACCCGCATGGCAAGCCGCCCCTGC CGCCGCTGCCATGGGTGCGCCACGACCCGACGACGGAGCGCGCGTTCAACGCAGCCGAGATGCCGCTGGCGCGCGATCCT GGGCGCGCGCGACTGGAGGCGAATTACGGCAATGCGCGGCGGACCAAGGCCATCGCGCTGGGCCCAGGCGGGCAGTTCGT CTACTTCGTCGGCGGCGATCTGGCCGACGACGTGGTCCGGCGCAGTCTCGAATCCTGCGGTGCCCAGGCCGGGACGCCCT GCCTGATCGTCGCGCTGGATGACGCGTTCGTGGTGCCGGTGCCGACGGTGATGAAGGCAACCGGCTTCTTTCACGCCGCC AGCCACACCGCGATCGCCGCTGACGCCCGCGACGAGGTCGCGCGGCGCCTCGCCGCCGCATCCTCCGGCTGGAACGCGAT CGCGGTCGGGACATCAGGCCATCCCGGCTACGGCCTGAACGGCGACCGCGAGGAGACCGCGATCGGCGGCGCGCTGGCCG ATTGCTCGACGCGCGACCAGGACTGCCGCGTGATCGCGATCGGCCCGTTCACGGTCGAGGATAATTAG
Upstream 100 bases:
>100_bases TCGAACGTGGCGCCGCGACGCGTGACTACTTCAAGGAAAGCCGGTTGCGCGGCCGCCGATCCGGCGGCATTCTCCCGGCC GTTCGGATCAGCGTGGTGAG
Downstream 100 bases:
>100_bases TCTACCAGACAATCGCGCGATGAGGCGTCAACGCGCATTCGACTTCGACACGATATTTGGATCGTGGGCTCGTTCAGGTG CTCGTGAATGCGCCCTCTCC
Product: putative adenylate cyclase
Products: NA
Alternate protein names: ATP pyrophosphate-lyase 3; Adenylyl cyclase 3 [H]
Number of amino acids: Translated: 555; Mature: 554
Protein sequence:
>555_residues MAGQIVLKRKIAAIFAADIAGYSRLVAEDEEETLRRLAAYREVVDDFIARAGGRIFNTAGDAVLAEFPSAVEAVRCAIDI QESLRTRNMAYPPSRQMSYRIGITIGDVVERDGDLLGDGVNIAARLEGLADVGGICISRAVHEQVANKLSVQFADMGARE VKNIPTPVHAYRVAMRREDGTYAAPQDKTKPPSVAKRLLKAGVAIVVLMVAVGVGTALYLDHRDPPSSQPDAAKSAAAAL SRLSAKPGSSGGATSPVSLSPEPAAATPAPQPSAQPSPIVTAEKFVPDAVPFVGERTRIALARDYVPAPGAKAFATTVNG VSAYVTGQPSEEAAKAAALEQCHQRAESSTSLHKCELYAVGDTIVYPHGKPPLPPLPWVRHDPTTERAFNAAEMPLARDP GRARLEANYGNARRTKAIALGPGGQFVYFVGGDLADDVVRRSLESCGAQAGTPCLIVALDDAFVVPVPTVMKATGFFHAA SHTAIAADARDEVARRLAAASSGWNAIAVGTSGHPGYGLNGDREETAIGGALADCSTRDQDCRVIAIGPFTVEDN
Sequences:
>Translated_555_residues MAGQIVLKRKIAAIFAADIAGYSRLVAEDEEETLRRLAAYREVVDDFIARAGGRIFNTAGDAVLAEFPSAVEAVRCAIDI QESLRTRNMAYPPSRQMSYRIGITIGDVVERDGDLLGDGVNIAARLEGLADVGGICISRAVHEQVANKLSVQFADMGARE VKNIPTPVHAYRVAMRREDGTYAAPQDKTKPPSVAKRLLKAGVAIVVLMVAVGVGTALYLDHRDPPSSQPDAAKSAAAAL SRLSAKPGSSGGATSPVSLSPEPAAATPAPQPSAQPSPIVTAEKFVPDAVPFVGERTRIALARDYVPAPGAKAFATTVNG VSAYVTGQPSEEAAKAAALEQCHQRAESSTSLHKCELYAVGDTIVYPHGKPPLPPLPWVRHDPTTERAFNAAEMPLARDP GRARLEANYGNARRTKAIALGPGGQFVYFVGGDLADDVVRRSLESCGAQAGTPCLIVALDDAFVVPVPTVMKATGFFHAA SHTAIAADARDEVARRLAAASSGWNAIAVGTSGHPGYGLNGDREETAIGGALADCSTRDQDCRVIAIGPFTVEDN >Mature_554_residues AGQIVLKRKIAAIFAADIAGYSRLVAEDEEETLRRLAAYREVVDDFIARAGGRIFNTAGDAVLAEFPSAVEAVRCAIDIQ ESLRTRNMAYPPSRQMSYRIGITIGDVVERDGDLLGDGVNIAARLEGLADVGGICISRAVHEQVANKLSVQFADMGAREV KNIPTPVHAYRVAMRREDGTYAAPQDKTKPPSVAKRLLKAGVAIVVLMVAVGVGTALYLDHRDPPSSQPDAAKSAAAALS RLSAKPGSSGGATSPVSLSPEPAAATPAPQPSAQPSPIVTAEKFVPDAVPFVGERTRIALARDYVPAPGAKAFATTVNGV SAYVTGQPSEEAAKAAALEQCHQRAESSTSLHKCELYAVGDTIVYPHGKPPLPPLPWVRHDPTTERAFNAAEMPLARDPG RARLEANYGNARRTKAIALGPGGQFVYFVGGDLADDVVRRSLESCGAQAGTPCLIVALDDAFVVPVPTVMKATGFFHAAS HTAIAADARDEVARRLAAASSGWNAIAVGTSGHPGYGLNGDREETAIGGALADCSTRDQDCRVIAIGPFTVEDN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 5 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF00211 Guanylate_cyc; PF00515 TPR_1 [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 58228; Mature: 58097
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS50125 GUANYLATE_CYCLASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGQIVLKRKIAAIFAADIAGYSRLVAEDEEETLRRLAAYREVVDDFIARAGGRIFNTAG CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC DAVLAEFPSAVEAVRCAIDIQESLRTRNMAYPPSRQMSYRIGITIGDVVERDGDLLGDGV CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEHHHHHCCCCCCCCCC NIAARLEGLADVGGICISRAVHEQVANKLSVQFADMGAREVKNIPTPVHAYRVAMRREDG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHCCHHHHHCCCCHHHHHHHHHCCCCC TYAAPQDKTKPPSVAKRLLKAGVAIVVLMVAVGVGTALYLDHRDPPSSQPDAAKSAAAAL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHH SRLSAKPGSSGGATSPVSLSPEPAAATPAPQPSAQPSPIVTAEKFVPDAVPFVGERTRIA HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHCCCCCCCCCCCCEEE LARDYVPAPGAKAFATTVNGVSAYVTGQPSEEAAKAAALEQCHQRAESSTSLHKCELYAV EEECCCCCCCCCHHHEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE GDTIVYPHGKPPLPPLPWVRHDPTTERAFNAAEMPLARDPGRARLEANYGNARRTKAIAL CCEEEECCCCCCCCCCCCCCCCCCHHHHCCHHCCCCCCCCCCEEEEECCCCCCCCEEEEE GPGGQFVYFVGGDLADDVVRRSLESCGAQAGTPCLIVALDDAFVVPVPTVMKATGFFHAA CCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEECCCHHHHHHCCHHHC SHTAIAADARDEVARRLAAASSGWNAIAVGTSGHPGYGLNGDREETAIGGALADCSTRDQ CCCEEECCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHCCHHHCCCCCCC DCRVIAIGPFTVEDN CCEEEEEECEEECCC >Mature Secondary Structure AGQIVLKRKIAAIFAADIAGYSRLVAEDEEETLRRLAAYREVVDDFIARAGGRIFNTAG CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC DAVLAEFPSAVEAVRCAIDIQESLRTRNMAYPPSRQMSYRIGITIGDVVERDGDLLGDGV CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEHHHHHCCCCCCCCCC NIAARLEGLADVGGICISRAVHEQVANKLSVQFADMGAREVKNIPTPVHAYRVAMRREDG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHCCHHHHHCCCCHHHHHHHHHCCCCC TYAAPQDKTKPPSVAKRLLKAGVAIVVLMVAVGVGTALYLDHRDPPSSQPDAAKSAAAAL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHH SRLSAKPGSSGGATSPVSLSPEPAAATPAPQPSAQPSPIVTAEKFVPDAVPFVGERTRIA HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHCCCCCCCCCCCCEEE LARDYVPAPGAKAFATTVNGVSAYVTGQPSEEAAKAAALEQCHQRAESSTSLHKCELYAV EEECCCCCCCCCHHHEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE GDTIVYPHGKPPLPPLPWVRHDPTTERAFNAAEMPLARDPGRARLEANYGNARRTKAIAL CCEEEECCCCCCCCCCCCCCCCCCHHHHCCHHCCCCCCCCCCEEEEECCCCCCCCEEEEE GPGGQFVYFVGGDLADDVVRRSLESCGAQAGTPCLIVALDDAFVVPVPTVMKATGFFHAA CCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEECCCHHHHHHCCHHHC SHTAIAADARDEVARRLAAASSGWNAIAVGTSGHPGYGLNGDREETAIGGALADCSTRDQ CCCEEECCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHCCHHHCCCCCCC DCRVIAIGPFTVEDN CCEEEEEECEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10485295; 11481432 [H]