| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is bp26 [H]
Identifier: 146337527
GI number: 146337527
Start: 386759
End: 387472
Strand: Reverse
Name: bp26 [H]
Synonym: BRADO0381
Alternate gene names: 146337527
Gene position: 387472-386759 (Counterclockwise)
Preceding gene: 146337528
Following gene: 146337525
Centisome position: 5.2
GC content: 69.75
Gene sequence:
>714_bases ATGATGCTCAGACCGCTGCTCGTTGCCGCGATGATGGCCTCCGCCGCTCTGCCTGCGCTGGCGGACGACATCGCTCGGCA GGACACGCCGGCGATCACCGTCAGCGGCGAGGGCAGCGTGCAGGCGCCGCCGGATCTGGCGCAGATCGATGCCGGCGTCG CCTCCGATGCCAAGACCGCGCGCGAGGCCGCCGAGGCCAACAACGTGGCCATGGCGAAGGTGCTGCAGTCCCTGAAGACG GCGGGGATCGCCGACAAGGACGTTCAGACTTCGCGGCTGTCGCTGCAGCCGCAATATGCCCAGAACCGGCCGGGACAGCC GGCCGTGACCGGCTATCGCGCCAGCAACCGCGTCACCATCAAGGTGCACGACATCGCCAAGGTGGCGAACGTGATCGATA CGGTCGTGGCCGCAGGCGCCAATGATGTTGGCAACGTCTTCTTCAGCGTCGCCGAGCCGTCCAAGCTGCTCGACCAGGCG CGCGAGAAGGCCGTCGCCGACGCGCGCCGCAAGGCCGAGATCTACGCCAAGGCCGCCGGCGTCACGCTGGGCCAGCCACT CAACATCGCCGAGGACGGCGCGCCCACCCCGGTGTTCCGCGCCAAGACGTTCGCCGCACCGATGGCCGCCGGGGCGCCGA CGCCGGTGGCACAGGGCGAGGAGACGCTGTCGGTCACGGTCAGCGTGACCTGGGCGATCAAGGCGGGGCAGTAA
Upstream 100 bases:
>100_bases AGGCCAAGGACACCTTCATCGAGGAGTACCTGACCGATCCCTTGAAGACGGCCGAGGACAAGCTCGTCATCAACGTCTAC GTGCCGTTGAAGTGAGCGCC
Downstream 100 bases:
>100_bases AGCCCCCCAGCCTCCGCGGCGTACTCACGCCAAGCCGTGAGCCGACACCGCTGCTACAAACTCGATGTCGTCCCGGCCTT GAGCCGGGACCCATACTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MMLRPLLVAAMMASAALPALADDIARQDTPAITVSGEGSVQAPPDLAQIDAGVASDAKTAREAAEANNVAMAKVLQSLKT AGIADKDVQTSRLSLQPQYAQNRPGQPAVTGYRASNRVTIKVHDIAKVANVIDTVVAAGANDVGNVFFSVAEPSKLLDQA REKAVADARRKAEIYAKAAGVTLGQPLNIAEDGAPTPVFRAKTFAAPMAAGAPTPVAQGEETLSVTVSVTWAIKAGQ
Sequences:
>Translated_237_residues MMLRPLLVAAMMASAALPALADDIARQDTPAITVSGEGSVQAPPDLAQIDAGVASDAKTAREAAEANNVAMAKVLQSLKT AGIADKDVQTSRLSLQPQYAQNRPGQPAVTGYRASNRVTIKVHDIAKVANVIDTVVAAGANDVGNVFFSVAEPSKLLDQA REKAVADARRKAEIYAKAAGVTLGQPLNIAEDGAPTPVFRAKTFAAPMAAGAPTPVAQGEETLSVTVSVTWAIKAGQ >Mature_237_residues MMLRPLLVAAMMASAALPALADDIARQDTPAITVSGEGSVQAPPDLAQIDAGVASDAKTAREAAEANNVAMAKVLQSLKT AGIADKDVQTSRLSLQPQYAQNRPGQPAVTGYRASNRVTIKVHDIAKVANVIDTVVAAGANDVGNVFFSVAEPSKLLDQA REKAVADARRKAEIYAKAAGVTLGQPLNIAEDGAPTPVFRAKTFAAPMAAGAPTPVAQGEETLSVTVSVTWAIKAGQ
Specific function: Unknown
COG id: COG2968
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789289, Length=214, Percent_Identity=29.9065420560748, Blast_Score=77, Evalue=1e-15,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007497 [H]
Pfam domain/function: PF04402 DUF541 [H]
EC number: NA
Molecular weight: Translated: 24394; Mature: 24394
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLRPLLVAAMMASAALPALADDIARQDTPAITVSGEGSVQAPPDLAQIDAGVASDAKTA CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHCCCCCCHHHHH REAAEANNVAMAKVLQSLKTAGIADKDVQTSRLSLQPQYAQNRPGQPAVTGYRASNRVTI HHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHEECCCHHHHCCCCCCCEECEECCCEEEE KVHDIAKVANVIDTVVAAGANDVGNVFFSVAEPSKLLDQAREKAVADARRKAEIYAKAAG EEHHHHHHHHHHHHHHHCCCCCHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC VTLGQPLNIAEDGAPTPVFRAKTFAAPMAAGAPTPVAQGEETLSVTVSVTWAIKAGQ CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCC >Mature Secondary Structure MMLRPLLVAAMMASAALPALADDIARQDTPAITVSGEGSVQAPPDLAQIDAGVASDAKTA CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHCCCCCCHHHHH REAAEANNVAMAKVLQSLKTAGIADKDVQTSRLSLQPQYAQNRPGQPAVTGYRASNRVTI HHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHEECCCHHHHCCCCCCCEECEECCCEEEE KVHDIAKVANVIDTVVAAGANDVGNVFFSVAEPSKLLDQAREKAVADARRKAEIYAKAAG EEHHHHHHHHHHHHHHHCCCCCHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC VTLGQPLNIAEDGAPTPVFRAKTFAAPMAAGAPTPVAQGEETLSVTVSVTWAIKAGQ CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8748294 [H]