| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is acrR [C]
Identifier: 146337471
GI number: 146337471
Start: 327575
End: 328117
Strand: Reverse
Name: acrR [C]
Synonym: BRADO0314
Alternate gene names: 146337471
Gene position: 328117-327575 (Counterclockwise)
Preceding gene: 146337472
Following gene: 146337470
Centisome position: 4.4
GC content: 67.03
Gene sequence:
>543_bases ATGAGTGATCAGCTTTCGGCCGGGGATTGGCTGGACCAGGGCCTCAAGATATTGGCCAGCCAAGGCTTCACGGCCCTGAA GGCGGAGCCGATGGCCAAAGCCATGGGTGTGTCGCGCGGCAGCTTCTATTGGCATTTCGAAGATGTGTCAGCGTTCCACG CGGAGCTGCTCAAACATTGGCGGGAGATCGCCGCCGAGCAGATCATCACCGGCGTGGAGTCGAGCGCCGGCACCGAGCCG GCGATCGCCGTGCTGCTTCGTCGCACCTTCACCATCAAGGCCACCCTTGAGCGGGCCGTCCGCAGCTGGGCTGCCTCGGA CGCGATCGCGCAGCAGGCCGTCCAGGCGATCGACAAGCGACGGCTCGGCTACGTCCAAAGCCTGCTTGTCGCCGAGGGCC TGGGCCCGGAGATCGCGGCGGCCCGCGCCCAGGTGCTGTACTGGGCGTTTCTCGGCTACGCCTTGTCGGGCCGCCCGCTG CCGGCCGCGCAGCAGGACACCGTCCTGACCGAGCTGATCCGCATCGCGCTGCTCAAGCCTTGA
Upstream 100 bases:
>100_bases GAATATCACGCATCGGGTCCTCCATACAGTTATGTATGGAGGATGCCCCTGATGCTGGCACTCGTCAATACAGTTGTGTA TGGGAAAGCATGGTGACGAC
Downstream 100 bases:
>100_bases GGCACGACAGACCGGCGGTGGCTGTGCTAGAGAGGCGCCCGCCGGAGACAGATGCCATGAACGCCCCGCTCGAACGCCCC GCCAATTCCGTCGATCCCAA
Product: putative transcriptional regulator protein
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulatory Protein; Transcriptional Regulator Protein
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MSDQLSAGDWLDQGLKILASQGFTALKAEPMAKAMGVSRGSFYWHFEDVSAFHAELLKHWREIAAEQIITGVESSAGTEP AIAVLLRRTFTIKATLERAVRSWAASDAIAQQAVQAIDKRRLGYVQSLLVAEGLGPEIAAARAQVLYWAFLGYALSGRPL PAAQQDTVLTELIRIALLKP
Sequences:
>Translated_180_residues MSDQLSAGDWLDQGLKILASQGFTALKAEPMAKAMGVSRGSFYWHFEDVSAFHAELLKHWREIAAEQIITGVESSAGTEP AIAVLLRRTFTIKATLERAVRSWAASDAIAQQAVQAIDKRRLGYVQSLLVAEGLGPEIAAARAQVLYWAFLGYALSGRPL PAAQQDTVLTELIRIALLKP >Mature_179_residues SDQLSAGDWLDQGLKILASQGFTALKAEPMAKAMGVSRGSFYWHFEDVSAFHAELLKHWREIAAEQIITGVESSAGTEPA IAVLLRRTFTIKATLERAVRSWAASDAIAQQAVQAIDKRRLGYVQSLLVAEGLGPEIAAARAQVLYWAFLGYALSGRPLP AAQQDTVLTELIRIALLKP
Specific function: Potential Regulator Protein For The Acrab Genes. [C]
COG id: COG1309
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19591; Mature: 19460
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDQLSAGDWLDQGLKILASQGFTALKAEPMAKAMGVSRGSFYWHFEDVSAFHAELLKHW CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHH REIAAEQIITGVESSAGTEPAIAVLLRRTFTIKATLERAVRSWAASDAIAQQAVQAIDKR HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLGYVQSLLVAEGLGPEIAAARAQVLYWAFLGYALSGRPLPAAQQDTVLTELIRIALLKP HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure SDQLSAGDWLDQGLKILASQGFTALKAEPMAKAMGVSRGSFYWHFEDVSAFHAELLKHW CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHH REIAAEQIITGVESSAGTEPAIAVLLRRTFTIKATLERAVRSWAASDAIAQQAVQAIDKR HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLGYVQSLLVAEGLGPEIAAARAQVLYWAFLGYALSGRPLPAAQQDTVLTELIRIALLKP HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA