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The map label for this gene is ycaR [C]

Identifier: 146337470

GI number: 146337470

Start: 327321

End: 327518

Strand: Reverse

Name: ycaR [C]

Synonym: BRADO0313

Alternate gene names: 146337470

Gene position: 327518-327321 (Counterclockwise)

Preceding gene: 146337471

Following gene: 146337469

Centisome position: 4.39

GC content: 63.64

Gene sequence:

>198_bases
ATGAACGCCCCGCTCGAACGCCCCGCCAATTCCGTCGATCCCAAGCTGCTCGAAATCCTGGTCTGTCCGATGACCAAGGG
CCCGCTGGAGTACGACGCTGCCAGGCAGGAGCTGATCTCGCGCTCGGCGAAGCTCGCTTATCCGATCCGCGACGGCATCC
CGATCATGCTGCCCGAGGAAGCGCGGAAGATCGACTGA

Upstream 100 bases:

>100_bases
CCGTCCTGACCGAGCTGATCCGCATCGCGCTGCTCAAGCCTTGAGGCACGACAGACCGGCGGTGGCTGTGCTAGAGAGGC
GCCCGCCGGAGACAGATGCC

Downstream 100 bases:

>100_bases
CCGATGCGCGCCGCTGTCATCCGCTGCGCGCTCGCGTTCGCCCTCCTCACCTCCGCGGCCTCCGCCGAGGAGAGTGCGAT
CCGGGTCGGCGCCATCGACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 65; Mature: 65

Protein sequence:

>65_residues
MNAPLERPANSVDPKLLEILVCPMTKGPLEYDAARQELISRSAKLAYPIRDGIPIMLPEEARKID

Sequences:

>Translated_65_residues
MNAPLERPANSVDPKLLEILVCPMTKGPLEYDAARQELISRSAKLAYPIRDGIPIMLPEEARKID
>Mature_65_residues
MNAPLERPANSVDPKLLEILVCPMTKGPLEYDAARQELISRSAKLAYPIRDGIPIMLPEEARKID

Specific function: Unknown

COG id: COG2835

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0434 family [H]

Homologues:

Organism=Homo sapiens, GI14249680, Length=57, Percent_Identity=54.3859649122807, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1787146, Length=51, Percent_Identity=50.9803921568627, Blast_Score=62, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005651 [H]

Pfam domain/function: PF03966 Trm112p [H]

EC number: NA

Molecular weight: Translated: 7260; Mature: 7260

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAPLERPANSVDPKLLEILVCPMTKGPLEYDAARQELISRSAKLAYPIRDGIPIMLPEE
CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCC
ARKID
CCCCC
>Mature Secondary Structure
MNAPLERPANSVDPKLLEILVCPMTKGPLEYDAARQELISRSAKLAYPIRDGIPIMLPEE
CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCC
ARKID
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA