| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146337458
Identifier: 146337458
GI number: 146337458
Start: 315081
End: 315809
Strand: Reverse
Name: 146337458
Synonym: BRADO0301
Alternate gene names: NA
Gene position: 315809-315081 (Counterclockwise)
Preceding gene: 146337462
Following gene: 146337457
Centisome position: 4.24
GC content: 70.51
Gene sequence:
>729_bases ATGGCCGTGCTGGTGACCCGTCCCGCCCCCGACAATGAACGGACCGCCCAAGCCCTGCGCGAGCGCGGCTTCGACGTGCT GCTGGCGCCGATGCTGCGCTTCGAGCCGGTCGCGCTGCTGGCCGATGTGGGCCAAGACGCGGCTGGAATCGTCGTGACGT CCGCGAACGCGCTGCGCGCGGCCGCGCCGCAGTTGCGGAGCTCTGCGCTGCTGCTTCTGCCGTTGTTCGCGGTCGGCGAC CAGACCGCGGCGGCGGCGCGCGCGGCTGGTTTCGCAAAAGTGATCTCGGCAGCCGGCGATGCGGCGGCGTTGCGCGAGGT GATCGCGACCAGCGGTGCGATCGAGGCCAAGGCAACCCTGCTCTATCTCGCCGGCGCCGACATCTCGCGCGATCTCGCCG CCGAGCTTGGCGCGCGCGGCTTCGAGGTCGTCACGCAGACGGTCTACCGGATGGCGCAGGTGACGAGCCTGCCGCGCGAG GTCTGCGAGGCGTTCGCGGCGAACACGATCCAAGCCGTGCTGCATTATTCGCGGCGAAGTGCCGCGGCGTTCGTGGCGGC GATCCGGGCCGAGGGCGTCGAAATCTCCGCGCTGGCGGTGCCGCATGGCTGCCTGTCGGCCAACGTCGCCGAGGTGCTGC GTGACGCCGGCGCGACGCAGGTCACAATCCCAGCGCATCCGGATGAAAACGAGATGCTGGAAGGGCTAGCTCGTGCGCTC CGGTCGTGA
Upstream 100 bases:
>100_bases CATTATGTGTGCGCGGATCCGCCTAACATCACGAGGTCGCCAGGTGCAATCACCACGCCGTTGCAGCCCGGCCGATCCGT ATTCGACGGGAGCATAGCAC
Downstream 100 bases:
>100_bases ATGGCGTAAGAGGGCCTGCCCAGTCTTGCTTCAGCCAGGGAACCTCCATCATGGTCGATGAACCCGACACCGCTGCACCG GCCTCCGATACCGGGCGGCA
Product: putative uroporphyrinogen-III synthase
Products: uroporphyrinogen III; H2O
Alternate protein names: Uroporphyrinogen III Synthase
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MAVLVTRPAPDNERTAQALRERGFDVLLAPMLRFEPVALLADVGQDAAGIVVTSANALRAAAPQLRSSALLLLPLFAVGD QTAAAARAAGFAKVISAAGDAAALREVIATSGAIEAKATLLYLAGADISRDLAAELGARGFEVVTQTVYRMAQVTSLPRE VCEAFAANTIQAVLHYSRRSAAAFVAAIRAEGVEISALAVPHGCLSANVAEVLRDAGATQVTIPAHPDENEMLEGLARAL RS
Sequences:
>Translated_242_residues MAVLVTRPAPDNERTAQALRERGFDVLLAPMLRFEPVALLADVGQDAAGIVVTSANALRAAAPQLRSSALLLLPLFAVGD QTAAAARAAGFAKVISAAGDAAALREVIATSGAIEAKATLLYLAGADISRDLAAELGARGFEVVTQTVYRMAQVTSLPRE VCEAFAANTIQAVLHYSRRSAAAFVAAIRAEGVEISALAVPHGCLSANVAEVLRDAGATQVTIPAHPDENEMLEGLARAL RS >Mature_241_residues AVLVTRPAPDNERTAQALRERGFDVLLAPMLRFEPVALLADVGQDAAGIVVTSANALRAAAPQLRSSALLLLPLFAVGDQ TAAAARAAGFAKVISAAGDAAALREVIATSGAIEAKATLLYLAGADISRDLAAELGARGFEVVTQTVYRMAQVTSLPREV CEAFAANTIQAVLHYSRRSAAAFVAAIRAEGVEISALAVPHGCLSANVAEVLRDAGATQVTIPAHPDENEMLEGLARALR S
Specific function: Unknown
COG id: COG1587
COG function: function code H; Uroporphyrinogen-III synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.2.1.75
Molecular weight: Translated: 25035; Mature: 24904
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVLVTRPAPDNERTAQALRERGFDVLLAPMLRFEPVALLADVGQDAAGIVVTSANALRA CEEEEECCCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHH AAPQLRSSALLLLPLFAVGDQTAAAARAAGFAKVISAAGDAAALREVIATSGAIEAKATL HHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHEE LYLAGADISRDLAAELGARGFEVVTQTVYRMAQVTSLPREVCEAFAANTIQAVLHYSRRS EEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAAFVAAIRAEGVEISALAVPHGCLSANVAEVLRDAGATQVTIPAHPDENEMLEGLARAL HHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHH RS CC >Mature Secondary Structure AVLVTRPAPDNERTAQALRERGFDVLLAPMLRFEPVALLADVGQDAAGIVVTSANALRA EEEEECCCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHH AAPQLRSSALLLLPLFAVGDQTAAAARAAGFAKVISAAGDAAALREVIATSGAIEAKATL HHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHEE LYLAGADISRDLAAELGARGFEVVTQTVYRMAQVTSLPREVCEAFAANTIQAVLHYSRRS EEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAAFVAAIRAEGVEISALAVPHGCLSANVAEVLRDAGATQVTIPAHPDENEMLEGLARAL HHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHH RS CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: hydroxymethylbilane
Specific reaction: hydroxymethylbilane = uroporphyrinogen III + H2O
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA