| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146337389
Identifier: 146337389
GI number: 146337389
Start: 234956
End: 236017
Strand: Direct
Name: 146337389
Synonym: BRADO0222
Alternate gene names: NA
Gene position: 234956-236017 (Clockwise)
Preceding gene: 146337385
Following gene: 146337393
Centisome position: 3.15
GC content: 70.43
Gene sequence:
>1062_bases ATGCCCCTTCCGGCAGCTGCCGCCAAGACGCAAGCGGGCGAGGCGCGGACCGTATCCGAGCTCGCCACCGAAATGTTGCG CCGGACCACGGCGCTCTTCCTCGCCGGCCCGCGGCCCGCCGCCGACGAGCAGCTCGATCTTTACGATCAGATGTTCGCCC GGCTGATGCCGCAGGTCGCGACCGAGGTGCTGGCAGAGCTGAGCACGGCGCTCGCCGTTGTCGAGCGCGCGCCTTACGCG ACTGTGCGGCTGCTGGCGGTGCATCCCGAATTACGGGTTGCCGGGCCGGTGCTGGCCAAGGCGGCGGTGCTGACCGAGCG CGACCTCGCCGAGTTCATCCGCGCTTCGAGCCCGGCGCATCTGGTGGCGGTCGCCAGCCGCCGGGGCATCGGCGACGCGC TCACCGCGCAGTTGATCGCGCGCGGCTTCCCGCCGGTGCGCATGGCGCTGGCGCAGAATCTCACCGCAAAACTGTCCGAG GACAGCTATCGCAGCCTGTTCAAGGTCGCCGAGCGCGACGAGGATCTCGCCGAGAAGCTCGCGCTGCGCACCGATCTGCC GGCCAAGCTGTCGCGCGCCTTTGTCGCCGCGGCGAGCGAAGCCGCCCGCGCCCGCTTCATCAAGGCGGCGCCGCCGGCGA CCCGCGCTACGCTGCAGGCCGCCCCGACGCGCTCCGCCGCCGCGGCGATGCGGGCGATGTGGGACTACGAGCCTGTGAAG GCCGAGGTTGCCGCGCTCAACCGCACCGGCAAGCTCGGTGACTCCGCCGTCAACCGCTTCTGCGTCACCGGCGATTTTCC CGCCGTCATCGCGGCGTTGGCGCTGCTTTGCGTGATCCCGATCGAGACGGTCGAATCGCTGCTGGACGAGAGCCGCATGA TGGATCTCTTGCTGGCCTGCAAGGCGGCACGGCTGAGCTGGGCGACCACCGGCATGATCCTGAAGGCGCGTCCGGGGTGC GACGCGATCGCGGCCGAGGATTTCGAGGAGGCGCGCAAGCGCTTCGAGAAGCTCGTGCTGTCGGAGGCGCAGTGGAAGGT GCGCGGCCTGCAGACGAGCTGA
Upstream 100 bases:
>100_bases GCTTAACGCCCCTTTAGTCCGGCCCTCGCATTCTTTCGCAAATTGATCATGGACCCGCGCTCCGCCACAGCTGGCGGGCG CCGTGAAAGAGAGATCTGCG
Downstream 100 bases:
>100_bases CCCGCGCGCCGAGGCAGCGGTCGCTCAGCCCGGCGGCGTCGCGTAGTTGGTGAAGTCGATCTTGAACATCGCCGGATCGA GCTTCTTGGTGGTGTCGAGA
Product: putative signal peptide
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 353; Mature: 352
Protein sequence:
>353_residues MPLPAAAAKTQAGEARTVSELATEMLRRTTALFLAGPRPAADEQLDLYDQMFARLMPQVATEVLAELSTALAVVERAPYA TVRLLAVHPELRVAGPVLAKAAVLTERDLAEFIRASSPAHLVAVASRRGIGDALTAQLIARGFPPVRMALAQNLTAKLSE DSYRSLFKVAERDEDLAEKLALRTDLPAKLSRAFVAAASEAARARFIKAAPPATRATLQAAPTRSAAAAMRAMWDYEPVK AEVAALNRTGKLGDSAVNRFCVTGDFPAVIAALALLCVIPIETVESLLDESRMMDLLLACKAARLSWATTGMILKARPGC DAIAAEDFEEARKRFEKLVLSEAQWKVRGLQTS
Sequences:
>Translated_353_residues MPLPAAAAKTQAGEARTVSELATEMLRRTTALFLAGPRPAADEQLDLYDQMFARLMPQVATEVLAELSTALAVVERAPYA TVRLLAVHPELRVAGPVLAKAAVLTERDLAEFIRASSPAHLVAVASRRGIGDALTAQLIARGFPPVRMALAQNLTAKLSE DSYRSLFKVAERDEDLAEKLALRTDLPAKLSRAFVAAASEAARARFIKAAPPATRATLQAAPTRSAAAAMRAMWDYEPVK AEVAALNRTGKLGDSAVNRFCVTGDFPAVIAALALLCVIPIETVESLLDESRMMDLLLACKAARLSWATTGMILKARPGC DAIAAEDFEEARKRFEKLVLSEAQWKVRGLQTS >Mature_352_residues PLPAAAAKTQAGEARTVSELATEMLRRTTALFLAGPRPAADEQLDLYDQMFARLMPQVATEVLAELSTALAVVERAPYAT VRLLAVHPELRVAGPVLAKAAVLTERDLAEFIRASSPAHLVAVASRRGIGDALTAQLIARGFPPVRMALAQNLTAKLSED SYRSLFKVAERDEDLAEKLALRTDLPAKLSRAFVAAASEAARARFIKAAPPATRATLQAAPTRSAAAAMRAMWDYEPVKA EVAALNRTGKLGDSAVNRFCVTGDFPAVIAALALLCVIPIETVESLLDESRMMDLLLACKAARLSWATTGMILKARPGCD AIAAEDFEEARKRFEKLVLSEAQWKVRGLQTS
Specific function: Unknown
COG id: COG5330
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37931; Mature: 37800
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLPAAAAKTQAGEARTVSELATEMLRRTTALFLAGPRPAADEQLDLYDQMFARLMPQVA CCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHH TEVLAELSTALAVVERAPYATVRLLAVHPELRVAGPVLAKAAVLTERDLAEFIRASSPAH HHHHHHHHHHHHHHHHCCCHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC LVAVASRRGIGDALTAQLIARGFPPVRMALAQNLTAKLSEDSYRSLFKVAERDEDLAEKL EEEEHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHH ALRTDLPAKLSRAFVAAASEAARARFIKAAPPATRATLQAAPTRSAAAAMRAMWDYEPVK HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHCCCHHH AEVAALNRTGKLGDSAVNRFCVTGDFPAVIAALALLCVIPIETVESLLDESRMMDLLLAC HHHHHHHCCCCCCHHHHHCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAARLSWATTGMILKARPGCDAIAAEDFEEARKRFEKLVLSEAQWKVRGLQTS HHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PLPAAAAKTQAGEARTVSELATEMLRRTTALFLAGPRPAADEQLDLYDQMFARLMPQVA CCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHH TEVLAELSTALAVVERAPYATVRLLAVHPELRVAGPVLAKAAVLTERDLAEFIRASSPAH HHHHHHHHHHHHHHHHCCCHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC LVAVASRRGIGDALTAQLIARGFPPVRMALAQNLTAKLSEDSYRSLFKVAERDEDLAEKL EEEEHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHH ALRTDLPAKLSRAFVAAASEAARARFIKAAPPATRATLQAAPTRSAAAAMRAMWDYEPVK HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHCCCHHH AEVAALNRTGKLGDSAVNRFCVTGDFPAVIAALALLCVIPIETVESLLDESRMMDLLLAC HHHHHHHCCCCCCHHHHHCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAARLSWATTGMILKARPGCDAIAAEDFEEARKRFEKLVLSEAQWKVRGLQTS HHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA