| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is ydiA [C]
Identifier: 146337366
GI number: 146337366
Start: 214094
End: 214933
Strand: Direct
Name: ydiA [C]
Synonym: BRADO0199
Alternate gene names: 146337366
Gene position: 214094-214933 (Clockwise)
Preceding gene: 146337358
Following gene: 146337367
Centisome position: 2.87
GC content: 63.21
Gene sequence:
>840_bases ATGCCCACCACCGGCAATTACTTTCACCTGCATCTGGTTTCCGATTCGACCGGCGAAACCCTGATCACGGTCGCGCGAGC GGTCGCCGCGCAATACGCCAACGTGACCCCGGTGGAGCATGTCTACCCGCTGGTGCGCAGCCAGAAGCAGCTCGATCGCG TGCTCGACGAGATCGAGGAAGCGCCGGGGATCGTGCTGTTCACCTTGCTCGAGAAGGATCTGGTCTCCAGGCTCGAGGCC AAGTGCCAGCAGATCAATATCCCGAGCCTGTCGATCATCGGCCCGGTGATGCAGCTTTTCGAGGCCTATCTCGGCGCCTC GACCGCCGGGCGCGTGGGCGCGCAGCACGTGCTCAACGCCGAATATTTCGCGCGCATCGACGCGCTGAACTACACGATGC TCCATGACGACGGCCAGATGGTCGACGGGCTGGAGGATGCCGATGTCGTGCTGGTCGGCGTCTCCAGGACGTCGAAGACC CCGACCTCGATCTATCTCGCCAATCGTGGTGTGCGCACCGCGAACGTGCCGCTGGTCCCGGGCATCCCGATTCCGCACCA GCTCGAGGTCCTGAAGAAGCCGCTGGTGGTCAGCCTGCACGCCACGCCGGAGCGCCTGATCCAGGTGCGGCAAAATCGTC TGCTCAGCATGGGTGCGGAAAGCGGCAACGAGAACTATGTCGATAAGCAGTCGGTGACCGATGAGGTCGCCTATGCGCGC AAGCTCAGTGCGAAGTTCAACTGGGTGATGCTCGACGTGACGCGGCGCTCGATCGAAGAGACCGCGGCCGCGATCCTGAA ACTCTATTCCGACCGGCAGCGGCAGCGTCTGCCGGAATGA
Upstream 100 bases:
>100_bases GCGAGCATGTGAAGAAGATTCGGGGTTATCCAAAGGGGTCAGCCGTCGCCTGCTTTTTGGCCCCGTCCTTCACAGGGATT CACAGATCGTTAAGGATTTG
Downstream 100 bases:
>100_bases GTGGACTGCGATGACCCTATGGTGTGGTGACGCGCCGCTGGTGCTGGCTTCGCAGAGCCGGGCCCGGCGCATGTTGCTCG AGAATGCCGGCCTCGCCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MPTTGNYFHLHLVSDSTGETLITVARAVAAQYANVTPVEHVYPLVRSQKQLDRVLDEIEEAPGIVLFTLLEKDLVSRLEA KCQQINIPSLSIIGPVMQLFEAYLGASTAGRVGAQHVLNAEYFARIDALNYTMLHDDGQMVDGLEDADVVLVGVSRTSKT PTSIYLANRGVRTANVPLVPGIPIPHQLEVLKKPLVVSLHATPERLIQVRQNRLLSMGAESGNENYVDKQSVTDEVAYAR KLSAKFNWVMLDVTRRSIEETAAAILKLYSDRQRQRLPE
Sequences:
>Translated_279_residues MPTTGNYFHLHLVSDSTGETLITVARAVAAQYANVTPVEHVYPLVRSQKQLDRVLDEIEEAPGIVLFTLLEKDLVSRLEA KCQQINIPSLSIIGPVMQLFEAYLGASTAGRVGAQHVLNAEYFARIDALNYTMLHDDGQMVDGLEDADVVLVGVSRTSKT PTSIYLANRGVRTANVPLVPGIPIPHQLEVLKKPLVVSLHATPERLIQVRQNRLLSMGAESGNENYVDKQSVTDEVAYAR KLSAKFNWVMLDVTRRSIEETAAAILKLYSDRQRQRLPE >Mature_278_residues PTTGNYFHLHLVSDSTGETLITVARAVAAQYANVTPVEHVYPLVRSQKQLDRVLDEIEEAPGIVLFTLLEKDLVSRLEAK CQQINIPSLSIIGPVMQLFEAYLGASTAGRVGAQHVLNAEYFARIDALNYTMLHDDGQMVDGLEDADVVLVGVSRTSKTP TSIYLANRGVRTANVPLVPGIPIPHQLEVLKKPLVVSLHATPERLIQVRQNRLLSMGAESGNENYVDKQSVTDEVAYARK LSAKFNWVMLDVTRRSIEETAAAILKLYSDRQRQRLPE
Specific function: Unknown
COG id: COG1806
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate, phosphate dikinase regulatory protein family [H]
Homologues:
Organism=Escherichia coli, GI1787995, Length=278, Percent_Identity=30.5755395683453, Blast_Score=91, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005177 [H]
Pfam domain/function: PF03618 DUF299 [H]
EC number: NA
Molecular weight: Translated: 30927; Mature: 30796
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTTGNYFHLHLVSDSTGETLITVARAVAAQYANVTPVEHVYPLVRSQKQLDRVLDEIEE CCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH APGIVLFTLLEKDLVSRLEAKCQQINIPSLSIIGPVMQLFEAYLGASTAGRVGAQHVLNA CCCEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCH EYFARIDALNYTMLHDDGQMVDGLEDADVVLVGVSRTSKTPTSIYLANRGVRTANVPLVP HHHHHHHHCEEEEEECCCCHHCCCCCCCEEEEEECCCCCCCCEEEEECCCCEECCCCCCC GIPIPHQLEVLKKPLVVSLHATPERLIQVRQNRLLSMGAESGNENYVDKQSVTDEVAYAR CCCCCHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH KLSAKFNWVMLDVTRRSIEETAAAILKLYSDRQRQRLPE HHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PTTGNYFHLHLVSDSTGETLITVARAVAAQYANVTPVEHVYPLVRSQKQLDRVLDEIEE CCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH APGIVLFTLLEKDLVSRLEAKCQQINIPSLSIIGPVMQLFEAYLGASTAGRVGAQHVLNA CCCEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCH EYFARIDALNYTMLHDDGQMVDGLEDADVVLVGVSRTSKTPTSIYLANRGVRTANVPLVP HHHHHHHHCEEEEEECCCCHHCCCCCCCEEEEEECCCCCCCCEEEEECCCCEECCCCCCC GIPIPHQLEVLKKPLVVSLHATPERLIQVRQNRLLSMGAESGNENYVDKQSVTDEVAYAR CCCCCHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH KLSAKFNWVMLDVTRRSIEETAAAILKLYSDRQRQRLPE HHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA