| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is yceF [C]
Identifier: 146337367
GI number: 146337367
Start: 214944
End: 215552
Strand: Direct
Name: yceF [C]
Synonym: BRADO0200
Alternate gene names: 146337367
Gene position: 214944-215552 (Clockwise)
Preceding gene: 146337366
Following gene: 146337368
Centisome position: 2.88
GC content: 65.35
Gene sequence:
>609_bases ATGACCCTATGGTGTGGTGACGCGCCGCTGGTGCTGGCTTCGCAGAGCCGGGCCCGGCGCATGTTGCTCGAGAATGCCGG CCTCGCCTGCGAGGCGGTGCCGGCGGATATCGACGAGCGCGCAATTCAGGCCGAGGCCGGATTGGTTGCGCCGTATGAAA TTGCGCTGCATTTGGCGACCGCCAAGGCGAAGGCCGTCTCGGCGCTTAACCCTGGCTGCTATGTCGTCGGTGCGGACCAG ACGCTCGCGCTCGGCGAGCGCATGTTCAACAAGCCGGCCGGACGGCAGCAGGCGATGCATCAGCTGCTGGCTCTGGCCGG GCGGACGCATGCGCTGCATTCGGCCATATCGGTCGTCCGAAACGGCGAGGTGCTGTTCTCCCACGTCGCCGTTGCCTGGA TGACGATGCGGACGCTGACCGAGAGTGACGTCGCCTGCTATCTCGACACCGCCGGCCACGCCGTGCTGTCGAGCGTCGGG GCCTATCAGCTCGAAGGCCTTGGCGTGCATCTGTTCGATCGCATCGACGGCGATCACTTCACCATTCTCGGCCTGCCCCT GCTGCCGCTGCTGGCTTTCCTCCGTGAAGCGAAGCTGCTCAAATTCTGA
Upstream 100 bases:
>100_bases CTCGACGTGACGCGGCGCTCGATCGAAGAGACCGCGGCCGCGATCCTGAAACTCTATTCCGACCGGCAGCGGCAGCGTCT GCCGGAATGAGTGGACTGCG
Downstream 100 bases:
>100_bases CAGCAGCCGAGGCTGATCACTGGAGCGAATGCGGATGAGAGTGCTGGGGCTGACCGGCTCGATGGGCATGGGCAAGTCGA CGACGGCGAAGCTGTTCGCC
Product: putative maf-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MTLWCGDAPLVLASQSRARRMLLENAGLACEAVPADIDERAIQAEAGLVAPYEIALHLATAKAKAVSALNPGCYVVGADQ TLALGERMFNKPAGRQQAMHQLLALAGRTHALHSAISVVRNGEVLFSHVAVAWMTMRTLTESDVACYLDTAGHAVLSSVG AYQLEGLGVHLFDRIDGDHFTILGLPLLPLLAFLREAKLLKF
Sequences:
>Translated_202_residues MTLWCGDAPLVLASQSRARRMLLENAGLACEAVPADIDERAIQAEAGLVAPYEIALHLATAKAKAVSALNPGCYVVGADQ TLALGERMFNKPAGRQQAMHQLLALAGRTHALHSAISVVRNGEVLFSHVAVAWMTMRTLTESDVACYLDTAGHAVLSSVG AYQLEGLGVHLFDRIDGDHFTILGLPLLPLLAFLREAKLLKF >Mature_201_residues TLWCGDAPLVLASQSRARRMLLENAGLACEAVPADIDERAIQAEAGLVAPYEIALHLATAKAKAVSALNPGCYVVGADQT LALGERMFNKPAGRQQAMHQLLALAGRTHALHSAISVVRNGEVLFSHVAVAWMTMRTLTESDVACYLDTAGHAVLSSVGA YQLEGLGVHLFDRIDGDHFTILGLPLLPLLAFLREAKLLKF
Specific function: Unknown
COG id: COG0424
COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the maf family [H]
Homologues:
Organism=Homo sapiens, GI117553627, Length=191, Percent_Identity=28.2722513089005, Blast_Score=70, Evalue=1e-12, Organism=Escherichia coli, GI87081830, Length=189, Percent_Identity=30.1587301587302, Blast_Score=80, Evalue=9e-17, Organism=Escherichia coli, GI1789646, Length=193, Percent_Identity=31.0880829015544, Blast_Score=76, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003697 [H]
Pfam domain/function: PF02545 Maf [H]
EC number: NA
Molecular weight: Translated: 21624; Mature: 21493
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: PS00238 OPSIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLWCGDAPLVLASQSRARRMLLENAGLACEAVPADIDERAIQAEAGLVAPYEIALHLAT CEEEECCCCEEEECHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHH AKAKAVSALNPGCYVVGADQTLALGERMFNKPAGRQQAMHQLLALAGRTHALHSAISVVR HHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH NGEVLFSHVAVAWMTMRTLTESDVACYLDTAGHAVLSSVGAYQLEGLGVHLFDRIDGDHF CCHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHCCCEEECCCCEEEEECCCCCEE TILGLPLLPLLAFLREAKLLKF EEEHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TLWCGDAPLVLASQSRARRMLLENAGLACEAVPADIDERAIQAEAGLVAPYEIALHLAT EEEECCCCEEEECHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHH AKAKAVSALNPGCYVVGADQTLALGERMFNKPAGRQQAMHQLLALAGRTHALHSAISVVR HHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH NGEVLFSHVAVAWMTMRTLTESDVACYLDTAGHAVLSSVGAYQLEGLGVHLFDRIDGDHF CCHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHCCCEEECCCCEEEEECCCCCEE TILGLPLLPLLAFLREAKLLKF EEEHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA