Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146337365
Identifier: 146337365
GI number: 146337365
Start: 213257
End: 213679
Strand: Reverse
Name: 146337365
Synonym: BRADO0198
Alternate gene names: NA
Gene position: 213679-213257 (Counterclockwise)
Preceding gene: 146337370
Following gene: 146337364
Centisome position: 2.87
GC content: 57.68
Gene sequence:
>423_bases ATGTACGAGTGGATCAAGGCGCTGCACGTCATTGCGGTCATCGCGTGGATGGCCGGCATGCTCTATCTGCCGCGCCTGTT CGTTTATCATTGCGACGCGGAGATCGGCTCGAAGCAGTCCGAGACCTTCAAGGTCATGGAGCGACGCCTGCTGAAGGCGA TCATCAATCCGGCGATCACCGTGACTTGGCTGGCCGGCCTCTACCTTGTGTGGGCCGGACACTGGTATACCAGCGGCTGG TTCCACGCAAAGTTCCTGCTCGTCCTGATCATGTCGGGCGTCCATGGCCTGTTCACCCGCTGGGTGCGGGAATTCGGCGA GGACAGGAATACGCGCAGCCAGAAATTCTATCGGATTATCAATGAGGTACCAACTGTTCTGATGATCGGCGTGGTGATTC TCGTGATCGTCAAGCCGTTCTGA
Upstream 100 bases:
>100_bases ACCCTAAGATTCTAAAATTATTTGGTTTGGAAGCGATCGAGCCAGCGGATATGTCTCGCCTCCCAATGGTCACCATCCGG TTAAGGGATCGCGACATCCG
Downstream 100 bases:
>100_bases TCTGATCCTCGAGAATACCGCTCCGCCCGAGATGCCTTGCGAACGGCGGCGCAATTTTCTATATTAAGGTCATCCCACCC CACGCAGGCGGATGTGGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MYEWIKALHVIAVIAWMAGMLYLPRLFVYHCDAEIGSKQSETFKVMERRLLKAIINPAITVTWLAGLYLVWAGHWYTSGW FHAKFLLVLIMSGVHGLFTRWVREFGEDRNTRSQKFYRIINEVPTVLMIGVVILVIVKPF
Sequences:
>Translated_140_residues MYEWIKALHVIAVIAWMAGMLYLPRLFVYHCDAEIGSKQSETFKVMERRLLKAIINPAITVTWLAGLYLVWAGHWYTSGW FHAKFLLVLIMSGVHGLFTRWVREFGEDRNTRSQKFYRIINEVPTVLMIGVVILVIVKPF >Mature_140_residues MYEWIKALHVIAVIAWMAGMLYLPRLFVYHCDAEIGSKQSETFKVMERRLLKAIINPAITVTWLAGLYLVWAGHWYTSGW FHAKFLLVLIMSGVHGLFTRWVREFGEDRNTRSQKFYRIINEVPTVLMIGVVILVIVKPF
Specific function: Unknown
COG id: COG1981
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0093 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014351 - InterPro: IPR005265 [H]
Pfam domain/function: PF03653 UPF0093 [H]
EC number: NA
Molecular weight: Translated: 16345; Mature: 16345
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYEWIKALHVIAVIAWMAGMLYLPRLFVYHCDAEIGSKQSETFKVMERRLLKAIINPAIT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHCCHHH VTWLAGLYLVWAGHWYTSGWFHAKFLLVLIMSGVHGLFTRWVREFGEDRNTRSQKFYRII HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH NEVPTVLMIGVVILVIVKPF HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MYEWIKALHVIAVIAWMAGMLYLPRLFVYHCDAEIGSKQSETFKVMERRLLKAIINPAIT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHCCHHH VTWLAGLYLVWAGHWYTSGWFHAKFLLVLIMSGVHGLFTRWVREFGEDRNTRSQKFYRII HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH NEVPTVLMIGVVILVIVKPF HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]