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The map label for this gene is secB [H]

Identifier: 146337370

GI number: 146337370

Start: 216975

End: 217463

Strand: Reverse

Name: secB [H]

Synonym: BRADO0203

Alternate gene names: 146337370

Gene position: 217463-216975 (Counterclockwise)

Preceding gene: 146337374

Following gene: 146337365

Centisome position: 2.92

GC content: 64.01

Gene sequence:

>489_bases
ATGACCAACGGTAACGGCGCCACTCCCGAGGCGGCCCCTCCTCCTCAACTGAACGTGCTGGCGCAATACATCAAGGATCT
CTCCTTCGAGAACCCGAACGCGCCTCAGTCGCTGGCGCCGCAAGGTCAGCCGCCGCAGATCAACATCCAGATCAATGTCG
GCGCCAACGCCCTGGCCGAGACCGAGTACGAAGTGACCCTCACGATCGAGGGCAAGGCCGAGAGCGGCAGCCAAGTCATG
TTCAGCTTCGAGTTGGTCTATGGCGGCGTGTTCCGGCTGGTCAATGTCCCCCAGGAGCATCTGTCGCCGATGCTGCTGAT
CGAGTGTCCGCGGCTGCTGTTCCCGTTCGCGCGCGAGATCGTTGCCAACTCTGTCCGCGACGGCGGCTTCCCGCCCTTGA
TGCTCGACCCGGTCGACTTCGTCAGCCTTTACCGCCAGAACATGGAACGTCAGGCCGCCGCTCAGGGCGTGCAGGGCCGC
CCGAGCTGA

Upstream 100 bases:

>100_bases
CACGACCCGAGCTTCCGACCGCTCGTCCTTGTGGAACAAGCCGGCCGTATGGTAGCCACGCGCCGCAACGAACCGCCCTT
TGTGCCAGGAGAACACTTCG

Downstream 100 bases:

>100_bases
TCCGTTAAGACATTATTGGACGTGATTGACGGACGTGACCCGAGCCCCGGTTCGGGTCACGCTCCGGTGAGGAAGTCCAT
CCAGATGGGCTTGTCGCCCA

Product: preprotein translocase subunit SecB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MTNGNGATPEAAPPPQLNVLAQYIKDLSFENPNAPQSLAPQGQPPQINIQINVGANALAETEYEVTLTIEGKAESGSQVM
FSFELVYGGVFRLVNVPQEHLSPMLLIECPRLLFPFAREIVANSVRDGGFPPLMLDPVDFVSLYRQNMERQAAAQGVQGR
PS

Sequences:

>Translated_162_residues
MTNGNGATPEAAPPPQLNVLAQYIKDLSFENPNAPQSLAPQGQPPQINIQINVGANALAETEYEVTLTIEGKAESGSQVM
FSFELVYGGVFRLVNVPQEHLSPMLLIECPRLLFPFAREIVANSVRDGGFPPLMLDPVDFVSLYRQNMERQAAAQGVQGR
PS
>Mature_161_residues
TNGNGATPEAAPPPQLNVLAQYIKDLSFENPNAPQSLAPQGQPPQINIQINVGANALAETEYEVTLTIEGKAESGSQVMF
SFELVYGGVFRLVNVPQEHLSPMLLIECPRLLFPFAREIVANSVRDGGFPPLMLDPVDFVSLYRQNMERQAAAQGVQGRP
S

Specific function: One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its r

COG id: COG1952

COG function: function code U; Preprotein translocase subunit SecB

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secB family [H]

Homologues:

Organism=Escherichia coli, GI1790038, Length=130, Percent_Identity=35.3846153846154, Blast_Score=93, Evalue=7e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003708 [H]

Pfam domain/function: PF02556 SecB [H]

EC number: NA

Molecular weight: Translated: 17607; Mature: 17476

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNGNGATPEAAPPPQLNVLAQYIKDLSFENPNAPQSLAPQGQPPQINIQINVGANALAE
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEC
TEYEVTLTIEGKAESGSQVMFSFELVYGGVFRLVNVPQEHLSPMLLIECPRLLFPFAREI
CCEEEEEEEECCCCCCCEEEEEHHHHHHHHHHHHCCCHHHCCCEEEECCHHHHHHHHHHH
VANSVRDGGFPPLMLDPVDFVSLYRQNMERQAAAQGVQGRPS
HHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TNGNGATPEAAPPPQLNVLAQYIKDLSFENPNAPQSLAPQGQPPQINIQINVGANALAE
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEC
TEYEVTLTIEGKAESGSQVMFSFELVYGGVFRLVNVPQEHLSPMLLIECPRLLFPFAREI
CCEEEEEEEECCCCCCCEEEEEHHHHHHHHHHHHCCCHHHCCCEEEECCHHHHHHHHHHH
VANSVRDGGFPPLMLDPVDFVSLYRQNMERQAAAQGVQGRPS
HHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA