Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is gph [C]
Identifier: 146337195
GI number: 146337195
Start: 25530
End: 26207
Strand: Reverse
Name: gph [C]
Synonym: BRADO0021
Alternate gene names: 146337195
Gene position: 26207-25530 (Counterclockwise)
Preceding gene: 146337196
Following gene: 146337194
Centisome position: 0.35
GC content: 63.86
Gene sequence:
>678_bases ATGTCCCACGTTCACGCAGTCCTGCTCGACCTCGACGGCACTCTGATCGACTCGCGCCCCGGCATCGCCGCGAGCGCGCT GGCGGCGTTGCGGTCGCTCGGTCATGCGCCTGATCAAGCACTGGATATCACGGCCTTCATCGGTCCGCCCTTGCAGGACA TGATGCGCGAGCTGCTGCAGGCTCATGGCGACCGTGTTGGCGGCGACCGTGTCGACGAAGCCGTCCTGGTCTATCGCCGG CATTATGGTGATATCGGTCTGTTCGACTGCTCGCTCTATCCCGGCATTCGCGAGGCGCTGCAGGAGATGCATCGCGCCGG GTTGCGGATCTATCTCGCGACGTCGAAGCGCGAGCTGTTCGCGCGCCGTATCCTGGAGCATCTCGATCTGGCGTCGTACT TCCAAGCCATTCATGGCTCGGTGCCTTCAGGCGAGCTCGATCACAAGCCCGAGTTGCTCGCGCATATTCTCATGAAGCGG AGTATCACCGCCGCGCATGGCGTGATGGTCGGCGACCGTCGTCATGACATCGCCGGCGCGCACGCCGTGGGCATGCGCAG CCTCGGCGTGCTCTGGGGTTATGGCGGTCGGGAGGAGTTGGAAACCTCCGGTGCAGGCCGTCTGGTGGAAAGTCCCTCCG ATCTGGCGGCAGCGGTGGTGACGATGTTGAAGAGATAG
Upstream 100 bases:
>100_bases CAGGCCCTGATGCAGAGACTGAAGCGTCCTGCATGGGGTTGATACGACGGTCGGGCGCATCGGCGTTTGCGGCGCCCCTG GCCGGGCGCTATGCTCGGTC
Downstream 100 bases:
>100_bases CCGGTCGGCCCTGTGCGTGGCCAATCTTGCACCGGAACCGGAAAGCCGCGATGATCCGCGCAAGAACTCTCAGGGCAGGA ATACCACGCAGATGGAATTC
Product: putative haloacid dehalogenase-like hydrolase family protein phosphoglycolate phosphatase
Products: NA
Alternate protein names: Nucleoside 5'-monophosphate phosphohydrolase [H]
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MSHVHAVLLDLDGTLIDSRPGIAASALAALRSLGHAPDQALDITAFIGPPLQDMMRELLQAHGDRVGGDRVDEAVLVYRR HYGDIGLFDCSLYPGIREALQEMHRAGLRIYLATSKRELFARRILEHLDLASYFQAIHGSVPSGELDHKPELLAHILMKR SITAAHGVMVGDRRHDIAGAHAVGMRSLGVLWGYGGREELETSGAGRLVESPSDLAAAVVTMLKR
Sequences:
>Translated_225_residues MSHVHAVLLDLDGTLIDSRPGIAASALAALRSLGHAPDQALDITAFIGPPLQDMMRELLQAHGDRVGGDRVDEAVLVYRR HYGDIGLFDCSLYPGIREALQEMHRAGLRIYLATSKRELFARRILEHLDLASYFQAIHGSVPSGELDHKPELLAHILMKR SITAAHGVMVGDRRHDIAGAHAVGMRSLGVLWGYGGREELETSGAGRLVESPSDLAAAVVTMLKR >Mature_224_residues SHVHAVLLDLDGTLIDSRPGIAASALAALRSLGHAPDQALDITAFIGPPLQDMMRELLQAHGDRVGGDRVDEAVLVYRRH YGDIGLFDCSLYPGIREALQEMHRAGLRIYLATSKRELFARRILEHLDLASYFQAIHGSVPSGELDHKPELLAHILMKRS ITAAHGVMVGDRRHDIAGAHAVGMRSLGVLWGYGGREELETSGAGRLVESPSDLAAAVVTMLKR
Specific function: Specifically dephosphorylates nucleoside 5'- monophosphates to nucleosides and inorganic phosphate. Displays high activity toward 5'-UMP and 5'-IMP, significant activity against 5'-XMP and 5'-TMP, and low activity against 5'-CMP [H]
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily [H]
Homologues:
Organism=Escherichia coli, GI1789787, Length=236, Percent_Identity=28.8135593220339, Blast_Score=87, Evalue=7e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =3.1.3.5 [H]
Molecular weight: Translated: 24464; Mature: 24332
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHVHAVLLDLDGTLIDSRPGIAASALAALRSLGHAPDQALDITAFIGPPLQDMMRELLQ CCCCEEEEEECCCEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEHHCCCCHHHHHHHHHH AHGDRVGGDRVDEAVLVYRRHYGDIGLFDCSLYPGIREALQEMHRAGLRIYLATSKRELF HCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHCCEEEEEECCHHHHH ARRILEHLDLASYFQAIHGSVPSGELDHKPELLAHILMKRSITAAHGVMVGDRRHDIAGA HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCEEECCCCHHHHHH HAVGMRSLGVLWGYGGREELETSGAGRLVESPSDLAAAVVTMLKR HHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure SHVHAVLLDLDGTLIDSRPGIAASALAALRSLGHAPDQALDITAFIGPPLQDMMRELLQ CCCEEEEEECCCEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEHHCCCCHHHHHHHHHH AHGDRVGGDRVDEAVLVYRRHYGDIGLFDCSLYPGIREALQEMHRAGLRIYLATSKRELF HCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHCCEEEEEECCHHHHH ARRILEHLDLASYFQAIHGSVPSGELDHKPELLAHILMKRSITAAHGVMVGDRRHDIAGA HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCEEECCCCHHHHHH HAVGMRSLGVLWGYGGREELETSGAGRLVESPSDLAAAVVTMLKR HHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]