| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301748
Identifier: 146301748
GI number: 146301748
Start: 4792538
End: 4792837
Strand: Direct
Name: 146301748
Synonym: Fjoh_4010
Alternate gene names: NA
Gene position: 4792538-4792837 (Clockwise)
Preceding gene: 146301747
Following gene: 146301749
Centisome position: 78.61
GC content: 33.0
Gene sequence:
>300_bases ATGGAAGATTCATCTGATGGCACAAGTACAACCAAACACAAATTCATGCTTTTTGTTTCAGGTATGTCTGTTAAATCAGG ACATGCAATCGAGAATTTACGCAAAATATGCGACACTTATCTAAACAATAATTATGAATTAGAAATAATAGATATAAGCC GTGATAAGGAACAAGCCGTAATTCATCAAATTGTGGCAATCCCAACATTAATCAAAGTTTATCCAGAACCCAAAAGAATC ATACTGGGAGATCTGTCAGATAAAGAAAAGGTTTTATATATACTAAATATAGGCGCATAG
Upstream 100 bases:
>100_bases TGAGAAAATTTCCTGAGCCAATACGTAAAATCATTGGTGACCTTTCTAATGAAGAAAGAGTTCTTGTAGGTCTTAATATT AAACCTATAAACACCTAATT
Downstream 100 bases:
>100_bases TTTGAAGAGCAAAGAAATAAATATAGAATCATTACTCGCAGAAATAGAATCATTAAAGGAAGAACTTTATGAATCTAACA GCATCGTCAATGCCATAAAA
Product: KaiB domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 99; Mature: 99
Protein sequence:
>99_residues MEDSSDGTSTTKHKFMLFVSGMSVKSGHAIENLRKICDTYLNNNYELEIIDISRDKEQAVIHQIVAIPTLIKVYPEPKRI ILGDLSDKEKVLYILNIGA
Sequences:
>Translated_99_residues MEDSSDGTSTTKHKFMLFVSGMSVKSGHAIENLRKICDTYLNNNYELEIIDISRDKEQAVIHQIVAIPTLIKVYPEPKRI ILGDLSDKEKVLYILNIGA >Mature_99_residues MEDSSDGTSTTKHKFMLFVSGMSVKSGHAIENLRKICDTYLNNNYELEIIDISRDKEQAVIHQIVAIPTLIKVYPEPKRI ILGDLSDKEKVLYILNIGA
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the kaiB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011649 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF07689 KaiB [H]
EC number: NA
Molecular weight: Translated: 11179; Mature: 11179
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDSSDGTSTTKHKFMLFVSGMSVKSGHAIENLRKICDTYLNNNYELEIIDISRDKEQAV CCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHH IHQIVAIPTLIKVYPEPKRIILGDLSDKEKVLYILNIGA HHHHHHHHHHEEECCCCCEEEEECCCCCCEEEEEEEECC >Mature Secondary Structure MEDSSDGTSTTKHKFMLFVSGMSVKSGHAIENLRKICDTYLNNNYELEIIDISRDKEQAV CCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHH IHQIVAIPTLIKVYPEPKRIILGDLSDKEKVLYILNIGA HHHHHHHHHHEEECCCCCEEEEECCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]