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The map label for this gene is omp16 [H]

Identifier: 146301711

GI number: 146301711

Start: 4757237

End: 4759165

Strand: Direct

Name: omp16 [H]

Synonym: Fjoh_3973

Alternate gene names: 146301711

Gene position: 4757237-4759165 (Clockwise)

Preceding gene: 146301710

Following gene: 146301712

Centisome position: 78.03

GC content: 36.6

Gene sequence:

>1929_bases
ATGGAAAGAAGAATTACTATACTCCTACTTCTGGCAATGCAAATCCTGTATTCACAGACCAAAAACAAATCGGCAGATGC
TTTGTTTGATAAAATGTATTATATCGAAGCCGCAAAATCGTATGAAATGTCCATAAAAAGCGGTGACGTTTCAAAAGAAA
TTTTACAGCGTGCCGGAGATGCACATTATTTTAATACACAAATGACAAGTGCCAGCAAATGGTACGGAAAACTGATTGCA
GATTATCCAAACGAAGTTTCTCCGGAATACTATTTTAGATACTCGCAGTCTTTACAGGGAATTCAGAATTATGATCTGGC
AAAAAAAATGATGAAAAACTTTTCTGAAAAACAAAAAACATCAGATTCCAGAGCGCAGAATTTTTCGCTTAAAACCGTAA
CACTCGAAGATATAAAAAAAATAAAACCACAGTTTTTACTCGAAAACCTCGAAATCAATTCAGCTTATTCAGATTTTGGA
CCTATGTTTTACAAAGGCGATTTGGTATATTCTACTACCGTAGATTCCTCTTATCTAAAAACAGCAAAATACGGCTGGAA
CGATCAGCCTTATTTAAACCTGCAATTAGGCAAAATAAGCCCAACCCAAGCCAATGTTACTTTTAAAGAACGTTTTGGTA
AAGAAATCACAACCCAGTTTCATGAAGCCTGTGTCGCTTTTTCGCCAGATGAAAAAACAATTTATTTTACACGAAATAAT
TACAACGGAAAACTAAAAAGAGACAGCAAAGGCATTAATAACTTAAAAATATATTCGGCAAAAGCGGTAGAAAACAACAA
TGGAACCGTTCGATGGGAAAACGTAAAAGAACTGCCGTTCAACAGTGATAACTATTCAGTTGGGCAGCCTTCTGTAAGCA
AAGACGGGAAAAAATTGTATTTCGTTTCAGACATGCCCGGAACAATTGGTGCTTCAGATATTTTTGTAGTCGATATTTTA
GGCGAAGACCAATATTCAAACCCAAAGAATTTAGGCGAAAAAATAAATACCAGCGGACGCGAAATGTTTCCGTTTATAAC
TGACAAAGCTTTGTATTTTTCTTCTGACGGATTTTTAGGCCTGGGCGGACTCGATGTTTTCGAAAGCCGATTAAACGACG
GAATTTTCGATTCTCCAAACAATCTTGGCGCGCCATTAAACAGCAATCGAGACGATTTTGGTTATATCGTAAACGAAGAA
ACCAACAAAGGTTTTGTATGTTCGAACAGAAAAACCGGAAAAGGCGATGATGATATTTATTCTTTCGAAAGAAGCTGTAC
ACAAGCTATTGAAGGGTATGTTTTTGATGCTACATCCAACAACAAAATTGCCGGCGCTATTGTAACTCTTAAAAACAATG
AAAATCAAAAAGTTGATGAAACCGTTTCTAAAATTGATGGAAAATTCGAATTCAGCGAAAACATCAATTGCAGTACGCCT
TATACAATTGAAGCATCAAAAGACAATTTTACCACAACAACAAAAGCGATTGTTACACCAGAAAATTCTGGAATAACACA
AGTTCCTATTGGTCTTGATCCATCGCTGATCGAAAGAAAAGACGGTTTACTGAAAATCAAAATTGGTATTATTTTCTTTG
ATCTCGATAAATCAGATGTTCGGTATGATGCCGCTATAGAATTAAACAAAGTCGTTTTGTTAATGAGCCAATATCCAAGC
GTAGTCATAAAAATTGAATCTCATACTGATTCCCGCGCAAATGATCAATACAATCTGGAACTTTCTGACCGACGTGCCAA
AGCAACCCGAGATTACATCATTTCGCAGGGAATTGCTCCGGAAAGAATCGAAAGTGCCATTGGCTATGGAGAAACACAGC
TTATTAATAACTGCTCAAACGGAGTTCCGTGTACCGAAGCACAGCATCAAATGAACAGACGAAGCGAGTTTATTATCACC
AAAATGTAA

Upstream 100 bases:

>100_bases
AGACTTACAACAGCGGTACGCATGAAATAATGCTTCGATTTGAATTAGTGTCTCGTAAAAAGGGATTAAAATCTCCCAGA
TTCTTTTAAAACTATGCTTT

Downstream 100 bases:

>100_bases
CCCAAAAATCGACCTTAAAACATTTTAATTTGCAGGTTGTGCATCTTTTATTTTATTTTTAAATAAGATGACTTACGAAT
GATATTGATACATTTGTAAT

Product: OmpA/MotB domain-containing protein

Products: NA

Alternate protein names: 16.5 kDa minor OMP; 16 kDa OMP; Minor outer membrane protein omp16 [H]

Number of amino acids: Translated: 642; Mature: 642

Protein sequence:

>642_residues
MERRITILLLLAMQILYSQTKNKSADALFDKMYYIEAAKSYEMSIKSGDVSKEILQRAGDAHYFNTQMTSASKWYGKLIA
DYPNEVSPEYYFRYSQSLQGIQNYDLAKKMMKNFSEKQKTSDSRAQNFSLKTVTLEDIKKIKPQFLLENLEINSAYSDFG
PMFYKGDLVYSTTVDSSYLKTAKYGWNDQPYLNLQLGKISPTQANVTFKERFGKEITTQFHEACVAFSPDEKTIYFTRNN
YNGKLKRDSKGINNLKIYSAKAVENNNGTVRWENVKELPFNSDNYSVGQPSVSKDGKKLYFVSDMPGTIGASDIFVVDIL
GEDQYSNPKNLGEKINTSGREMFPFITDKALYFSSDGFLGLGGLDVFESRLNDGIFDSPNNLGAPLNSNRDDFGYIVNEE
TNKGFVCSNRKTGKGDDDIYSFERSCTQAIEGYVFDATSNNKIAGAIVTLKNNENQKVDETVSKIDGKFEFSENINCSTP
YTIEASKDNFTTTTKAIVTPENSGITQVPIGLDPSLIERKDGLLKIKIGIIFFDLDKSDVRYDAAIELNKVVLLMSQYPS
VVIKIESHTDSRANDQYNLELSDRRAKATRDYIISQGIAPERIESAIGYGETQLINNCSNGVPCTEAQHQMNRRSEFIIT
KM

Sequences:

>Translated_642_residues
MERRITILLLLAMQILYSQTKNKSADALFDKMYYIEAAKSYEMSIKSGDVSKEILQRAGDAHYFNTQMTSASKWYGKLIA
DYPNEVSPEYYFRYSQSLQGIQNYDLAKKMMKNFSEKQKTSDSRAQNFSLKTVTLEDIKKIKPQFLLENLEINSAYSDFG
PMFYKGDLVYSTTVDSSYLKTAKYGWNDQPYLNLQLGKISPTQANVTFKERFGKEITTQFHEACVAFSPDEKTIYFTRNN
YNGKLKRDSKGINNLKIYSAKAVENNNGTVRWENVKELPFNSDNYSVGQPSVSKDGKKLYFVSDMPGTIGASDIFVVDIL
GEDQYSNPKNLGEKINTSGREMFPFITDKALYFSSDGFLGLGGLDVFESRLNDGIFDSPNNLGAPLNSNRDDFGYIVNEE
TNKGFVCSNRKTGKGDDDIYSFERSCTQAIEGYVFDATSNNKIAGAIVTLKNNENQKVDETVSKIDGKFEFSENINCSTP
YTIEASKDNFTTTTKAIVTPENSGITQVPIGLDPSLIERKDGLLKIKIGIIFFDLDKSDVRYDAAIELNKVVLLMSQYPS
VVIKIESHTDSRANDQYNLELSDRRAKATRDYIISQGIAPERIESAIGYGETQLINNCSNGVPCTEAQHQMNRRSEFIIT
KM
>Mature_642_residues
MERRITILLLLAMQILYSQTKNKSADALFDKMYYIEAAKSYEMSIKSGDVSKEILQRAGDAHYFNTQMTSASKWYGKLIA
DYPNEVSPEYYFRYSQSLQGIQNYDLAKKMMKNFSEKQKTSDSRAQNFSLKTVTLEDIKKIKPQFLLENLEINSAYSDFG
PMFYKGDLVYSTTVDSSYLKTAKYGWNDQPYLNLQLGKISPTQANVTFKERFGKEITTQFHEACVAFSPDEKTIYFTRNN
YNGKLKRDSKGINNLKIYSAKAVENNNGTVRWENVKELPFNSDNYSVGQPSVSKDGKKLYFVSDMPGTIGASDIFVVDIL
GEDQYSNPKNLGEKINTSGREMFPFITDKALYFSSDGFLGLGGLDVFESRLNDGIFDSPNNLGAPLNSNRDDFGYIVNEE
TNKGFVCSNRKTGKGDDDIYSFERSCTQAIEGYVFDATSNNKIAGAIVTLKNNENQKVDETVSKIDGKFEFSENINCSTP
YTIEASKDNFTTTTKAIVTPENSGITQVPIGLDPSLIERKDGLLKIKIGIIFFDLDKSDVRYDAAIELNKVVLLMSQYPS
VVIKIESHTDSRANDQYNLELSDRRAKATRDYIISQGIAPERIESAIGYGETQLINNCSNGVPCTEAQHQMNRRSEFIIT
KM

Specific function: Thought To Play A Role In Bacterial Envelope Integrity. Very Strongly Associated With The Peptidoglycan. [C]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1786962, Length=113, Percent_Identity=31.858407079646, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- InterPro:   IPR014169 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 72408; Mature: 72408

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERRITILLLLAMQILYSQTKNKSADALFDKMYYIEAAKSYEMSIKSGDVSKEILQRAGD
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEECCCEEEEECCCCHHHHHHHHCCC
AHYFNTQMTSASKWYGKLIADYPNEVSPEYYFRYSQSLQGIQNYDLAKKMMKNFSEKQKT
CEEEECCCCCCHHHHHHHHHCCCCCCCCHHHEEEHHHHCCCCCHHHHHHHHHHHHHHHHC
SDSRAQNFSLKTVTLEDIKKIKPQFLLENLEINSAYSDFGPMFYKGDLVYSTTVDSSYLK
CCHHHHCCEEEEEEHHHHHHCCHHHHHHCCCCCCCHHHCCCCEEECCEEEEECCCHHHHH
TAKYGWNDQPYLNLQLGKISPTQANVTFKERFGKEITTQFHEACVAFSPDEKTIYFTRNN
HHHCCCCCCCEEEEEECCCCCCCCCEEHHHHCCHHHHHHHHHHHEEECCCCCEEEEEECC
YNGKLKRDSKGINNLKIYSAKAVENNNGTVRWENVKELPFNSDNYSVGQPSVSKDGKKLY
CCCEEECCCCCCCCEEEEEEEEEECCCCEEEECCCEECCCCCCCCCCCCCCCCCCCCEEE
FVSDMPGTIGASDIFVVDILGEDQYSNPKNLGEKINTSGREMFPFITDKALYFSSDGFLG
EEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCEECCEEECCEEEEECCCCEE
LGGLDVFESRLNDGIFDSPNNLGAPLNSNRDDFGYIVNEETNKGFVCSNRKTGKGDDDIY
CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEECCCCCCCCCHHHH
SFERSCTQAIEGYVFDATSNNKIAGAIVTLKNNENQKVDETVSKIDGKFEFSENINCSTP
HHHHHHHHHHCCEEEECCCCCEEEEEEEEEECCCCCHHHHHHHHCCCCEEECCCCCCCCC
YTIEASKDNFTTTTKAIVTPENSGITQVPIGLDPSLIERKDGLLKIKIGIIFFDLDKSDV
EEEEECCCCCEEEEEEEEECCCCCCEEEECCCCHHHHHCCCCEEEEEEEEEEEECCCCCC
RYDAAIELNKVVLLMSQYPSVVIKIESHTDSRANDQYNLELSDRRAKATRDYIISQGIAP
EEEEEEEECCEEEEEECCCEEEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCH
ERIESAIGYGETQLINNCSNGVPCTEAQHQMNRRSEFIITKM
HHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHCCCCCEEEEEC
>Mature Secondary Structure
MERRITILLLLAMQILYSQTKNKSADALFDKMYYIEAAKSYEMSIKSGDVSKEILQRAGD
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEECCCEEEEECCCCHHHHHHHHCCC
AHYFNTQMTSASKWYGKLIADYPNEVSPEYYFRYSQSLQGIQNYDLAKKMMKNFSEKQKT
CEEEECCCCCCHHHHHHHHHCCCCCCCCHHHEEEHHHHCCCCCHHHHHHHHHHHHHHHHC
SDSRAQNFSLKTVTLEDIKKIKPQFLLENLEINSAYSDFGPMFYKGDLVYSTTVDSSYLK
CCHHHHCCEEEEEEHHHHHHCCHHHHHHCCCCCCCHHHCCCCEEECCEEEEECCCHHHHH
TAKYGWNDQPYLNLQLGKISPTQANVTFKERFGKEITTQFHEACVAFSPDEKTIYFTRNN
HHHCCCCCCCEEEEEECCCCCCCCCEEHHHHCCHHHHHHHHHHHEEECCCCCEEEEEECC
YNGKLKRDSKGINNLKIYSAKAVENNNGTVRWENVKELPFNSDNYSVGQPSVSKDGKKLY
CCCEEECCCCCCCCEEEEEEEEEECCCCEEEECCCEECCCCCCCCCCCCCCCCCCCCEEE
FVSDMPGTIGASDIFVVDILGEDQYSNPKNLGEKINTSGREMFPFITDKALYFSSDGFLG
EEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCEECCEEECCEEEEECCCCEE
LGGLDVFESRLNDGIFDSPNNLGAPLNSNRDDFGYIVNEETNKGFVCSNRKTGKGDDDIY
CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEECCCCCCCCCHHHH
SFERSCTQAIEGYVFDATSNNKIAGAIVTLKNNENQKVDETVSKIDGKFEFSENINCSTP
HHHHHHHHHHCCEEEECCCCCEEEEEEEEEECCCCCHHHHHHHHCCCCEEECCCCCCCCC
YTIEASKDNFTTTTKAIVTPENSGITQVPIGLDPSLIERKDGLLKIKIGIIFFDLDKSDV
EEEEECCCCCEEEEEEEEECCCCCCEEEECCCCHHHHHCCCCEEEEEEEEEEEECCCCCC
RYDAAIELNKVVLLMSQYPSVVIKIESHTDSRANDQYNLELSDRRAKATRDYIISQGIAP
EEEEEEEECCEEEEEECCCEEEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCH
ERIESAIGYGETQLINNCSNGVPCTEAQHQMNRRSEFIITKM
HHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8063379; 10456959 [H]