Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301710

Identifier: 146301710

GI number: 146301710

Start: 4756302

End: 4757225

Strand: Direct

Name: 146301710

Synonym: Fjoh_3972

Alternate gene names: NA

Gene position: 4756302-4757225 (Clockwise)

Preceding gene: 146301709

Following gene: 146301711

Centisome position: 78.01

GC content: 39.29

Gene sequence:

>924_bases
ATGATTAAAAATATAAATAAGATTTTCACAATCATTACGATGCTTTCTGTATTTGGTGTTGCTGCACAGCAAGATCCGCA
ATACACGCAGTATATGTATAATACGCTAAGTGTAAACTCTGCGTATGCCGGCTCATTAGGTCATTTAGCCATAACCGGAA
TATACAGAACACAATGGGTGGGTCTTGAAGGCGCCCCAAATACACAGTCTTTTACTCTGGATACACCCATTGCAAAAAAT
CTTGGATTAGGTTTATCTGTAGTCAGCGAAGAAATAGGCCCGTCAGAAGAACAATATATTGATGCTAATTTCTCTTATAC
CATACAATCAGGGCAGACTTACAAATTATCTTTTGGTCTTAAAGGCGGCGGAAGAGTCATTAACATCGACTGGACAAAAG
GAAGCCACAAAGATCCTGACGTTCAGTTTCGCGAAAACATTACCAATAAATTCCTTCCCGTTGTAGGCGCCGGATTATAC
TGGCACGGCGAAAGAGATTACATTGGAATTGCCATTCCTAACTTTTTAACCCGCGAAAGATATAATTACGATGATATAGC
CGATGATCTTGTAAACGAAAGAATGCACGTTTACTTAATTGGAGGAATTGTTTTTGACCTTTCCGCGCATACTAAATTTA
AACCTGCCGTGTTGGTTAAATACGTTGCCGGTGCACCCCTGATCGCTGATTTTTCAGCCAATTTCATGTTCAATAATGCT
ATAACACTTGGTGCTTCTTATCGTACAGGAGATTCTGTAAGTGCAATGGCCTCTTTACAAATTACGCCTCAGTTTTTGGT
TGGATATGCGTATGATTATACCACAACCGAACTACAGACTTACAACAGCGGTACGCATGAAATAATGCTTCGATTTGAAT
TAGTGTCTCGTAAAAAGGGATTAAAATCTCCCAGATTCTTTTAA

Upstream 100 bases:

>100_bases
GGTACTTATTTCTACGTTCTTGATCTCGGAAACGGTTCGGCTAAAAAATCCGGATGGCTTTATTTAAAATAAAATAGGAT
AACCAAAATAAGAATTGGCT

Downstream 100 bases:

>100_bases
AACTATGCTTTATGGAAAGAAGAATTACTATACTCCTACTTCTGGCAATGCAAATCCTGTATTCACAGACCAAAAACAAA
TCGGCAGATGCTTTGTTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MIKNINKIFTIITMLSVFGVAAQQDPQYTQYMYNTLSVNSAYAGSLGHLAITGIYRTQWVGLEGAPNTQSFTLDTPIAKN
LGLGLSVVSEEIGPSEEQYIDANFSYTIQSGQTYKLSFGLKGGGRVINIDWTKGSHKDPDVQFRENITNKFLPVVGAGLY
WHGERDYIGIAIPNFLTRERYNYDDIADDLVNERMHVYLIGGIVFDLSAHTKFKPAVLVKYVAGAPLIADFSANFMFNNA
ITLGASYRTGDSVSAMASLQITPQFLVGYAYDYTTTELQTYNSGTHEIMLRFELVSRKKGLKSPRFF

Sequences:

>Translated_307_residues
MIKNINKIFTIITMLSVFGVAAQQDPQYTQYMYNTLSVNSAYAGSLGHLAITGIYRTQWVGLEGAPNTQSFTLDTPIAKN
LGLGLSVVSEEIGPSEEQYIDANFSYTIQSGQTYKLSFGLKGGGRVINIDWTKGSHKDPDVQFRENITNKFLPVVGAGLY
WHGERDYIGIAIPNFLTRERYNYDDIADDLVNERMHVYLIGGIVFDLSAHTKFKPAVLVKYVAGAPLIADFSANFMFNNA
ITLGASYRTGDSVSAMASLQITPQFLVGYAYDYTTTELQTYNSGTHEIMLRFELVSRKKGLKSPRFF
>Mature_307_residues
MIKNINKIFTIITMLSVFGVAAQQDPQYTQYMYNTLSVNSAYAGSLGHLAITGIYRTQWVGLEGAPNTQSFTLDTPIAKN
LGLGLSVVSEEIGPSEEQYIDANFSYTIQSGQTYKLSFGLKGGGRVINIDWTKGSHKDPDVQFRENITNKFLPVVGAGLY
WHGERDYIGIAIPNFLTRERYNYDDIADDLVNERMHVYLIGGIVFDLSAHTKFKPAVLVKYVAGAPLIADFSANFMFNNA
ITLGASYRTGDSVSAMASLQITPQFLVGYAYDYTTTELQTYNSGTHEIMLRFELVSRKKGLKSPRFF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34182; Mature: 34182

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKNINKIFTIITMLSVFGVAAQQDPQYTQYMYNTLSVNSAYAGSLGHLAITGIYRTQWV
CCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHEECCCCCCCCCCCEEEEEEEEEEEE
GLEGAPNTQSFTLDTPIAKNLGLGLSVVSEEIGPSEEQYIDANFSYTIQSGQTYKLSFGL
ECCCCCCCCEEEECCCCHHHCCCCHHHHHHHCCCCHHHEEECCEEEEEECCCEEEEEEEE
KGGGRVINIDWTKGSHKDPDVQFRENITNKFLPVVGAGLYWHGERDYIGIAIPNFLTRER
CCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCHHHHCC
YNYDDIADDLVNERMHVYLIGGIVFDLSAHTKFKPAVLVKYVAGAPLIADFSANFMFNNA
CCHHHHHHHHHCCCEEEEEEEEEEEEECCCCCCCHHHEEHHHCCCCEEEECCCCEEECCE
ITLGASYRTGDSVSAMASLQITPQFLVGYAYDYTTTELQTYNSGTHEIMLRFELVSRKKG
EEECCCCCCCCCCEEEEEEEECHHHEEEEEECCEEEEEEECCCCCEEEEEEEEEHHHHCC
LKSPRFF
CCCCCCC
>Mature Secondary Structure
MIKNINKIFTIITMLSVFGVAAQQDPQYTQYMYNTLSVNSAYAGSLGHLAITGIYRTQWV
CCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHEECCCCCCCCCCCEEEEEEEEEEEE
GLEGAPNTQSFTLDTPIAKNLGLGLSVVSEEIGPSEEQYIDANFSYTIQSGQTYKLSFGL
ECCCCCCCCEEEECCCCHHHCCCCHHHHHHHCCCCHHHEEECCEEEEEECCCEEEEEEEE
KGGGRVINIDWTKGSHKDPDVQFRENITNKFLPVVGAGLYWHGERDYIGIAIPNFLTRER
CCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCHHHHCC
YNYDDIADDLVNERMHVYLIGGIVFDLSAHTKFKPAVLVKYVAGAPLIADFSANFMFNNA
CCHHHHHHHHHCCCEEEEEEEEEEEEECCCCCCCHHHEEHHHCCCCEEEECCCCEEECCE
ITLGASYRTGDSVSAMASLQITPQFLVGYAYDYTTTELQTYNSGTHEIMLRFELVSRKKG
EEECCCCCCCCCCEEEEEEEECHHHEEEEEECCEEEEEEECCCCCEEEEEEEEEHHHHCC
LKSPRFF
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA