| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301630
Identifier: 146301630
GI number: 146301630
Start: 4637693
End: 4638160
Strand: Direct
Name: 146301630
Synonym: Fjoh_3891
Alternate gene names: NA
Gene position: 4637693-4638160 (Clockwise)
Preceding gene: 146301629
Following gene: 146301631
Centisome position: 76.07
GC content: 31.41
Gene sequence:
>468_bases ATGAAACCAATTCACTCCATCATAACAGCTCTTATAATTACACTTTACGGATGCAACACAAATAAAGACAATGTGAATGA AAAAGCTTCTGTATCAATTTTAGATGAATTACCGGAAAACCCTCTCTTATTGTCACCTATTACATTTTCTATTAATCCAA ATAAAGCTTCAATGTCAACTTTATACGGTAATAAAACCGCTTTTGAGCATGCAAAAACTAAAGCTGATAATGCTTATCCA AAAGGATCTGTTTTATATGAAGTGACCTGGAGACAAAAAGCAGATTCACTATGGTATGGCGCCAATATTCCTGATAAAAT AATTAGTGTAGAAAAAGTACAATTTATCGAAAACAATAATCCAAAATATGAATTATATGCCGGGCATCCTTTAAAAAAAG TTTATATTAATGATAAAAATAAAAGACTGCTTTTAATACTATCCCAGCGTATGGCAGAGACTCCCTAA
Upstream 100 bases:
>100_bases TTTCCTGTCATAGTCCTGTTAAAAACAATGATTATGTTTTTACATCACCCCTGCATCTTGATATCAATAAATTTAATATT TACAGCAAAAACCAATAATT
Downstream 100 bases:
>100_bases AGATATTAGTTCTGATTTCTAAATTCTTGCCTCAAAAAACAGACGTTTAAACAAAGTATCTTAGGACGTTTAAACAAAAC AAATCTTTGCTGTCACATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MKPIHSIITALIITLYGCNTNKDNVNEKASVSILDELPENPLLLSPITFSINPNKASMSTLYGNKTAFEHAKTKADNAYP KGSVLYEVTWRQKADSLWYGANIPDKIISVEKVQFIENNNPKYELYAGHPLKKVYINDKNKRLLLILSQRMAETP
Sequences:
>Translated_155_residues MKPIHSIITALIITLYGCNTNKDNVNEKASVSILDELPENPLLLSPITFSINPNKASMSTLYGNKTAFEHAKTKADNAYP KGSVLYEVTWRQKADSLWYGANIPDKIISVEKVQFIENNNPKYELYAGHPLKKVYINDKNKRLLLILSQRMAETP >Mature_155_residues MKPIHSIITALIITLYGCNTNKDNVNEKASVSILDELPENPLLLSPITFSINPNKASMSTLYGNKTAFEHAKTKADNAYP KGSVLYEVTWRQKADSLWYGANIPDKIISVEKVQFIENNNPKYELYAGHPLKKVYINDKNKRLLLILSQRMAETP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17508; Mature: 17508
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPIHSIITALIITLYGCNTNKDNVNEKASVSILDELPENPLLLSPITFSINPNKASMST CCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHCCCCCEEECCEEEEECCCCCCHHH LYGNKTAFEHAKTKADNAYPKGSVLYEVTWRQKADSLWYGANIPDKIISVEKVQFIENNN HCCCCHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCEEECCCCCHHHHHHHEEEEEECCC PKYELYAGHPLKKVYINDKNKRLLLILSQRMAETP CCEEEEECCCEEEEEECCCCCEEEEEEECHHCCCC >Mature Secondary Structure MKPIHSIITALIITLYGCNTNKDNVNEKASVSILDELPENPLLLSPITFSINPNKASMST CCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHCCCCCEEECCEEEEECCCCCCHHH LYGNKTAFEHAKTKADNAYPKGSVLYEVTWRQKADSLWYGANIPDKIISVEKVQFIENNN HCCCCHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCEEECCCCCHHHHHHHEEEEEECCC PKYELYAGHPLKKVYINDKNKRLLLILSQRMAETP CCEEEEECCCEEEEEECCCCCEEEEEEECHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA