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The map label for this gene is xynZ [H]

Identifier: 146301617

GI number: 146301617

Start: 4617487

End: 4619169

Strand: Reverse

Name: xynZ [H]

Synonym: Fjoh_3878

Alternate gene names: 146301617

Gene position: 4619169-4617487 (Counterclockwise)

Preceding gene: 146301618

Following gene: 146301616

Centisome position: 75.76

GC content: 37.49

Gene sequence:

>1683_bases
ATGAAATTAATAATCAGGTTTTCAATATTTACGATTCTTTTTTTAACAGCACAGAAAGGATATTCCCAAGATCCGAATTT
CCATGTGTATTTAAGTTTCGGACAATCGAATATGGAAGGTTTTGCCAAAATAGAACCTCAGGATAAAACAGGTGTCAACG
AACGCTTTCAGGTTTTGTCGGCAGTTGACTGTCCTGAAATGGGACGCGAAAAAGGGAAATGGTATACAGCTGTTCCGCCT
TTATGCAGATGTACCACAGGACTTACCCCAATGGATTATTTTGGAAGAACTATGATATCGAACCTTCCGCAGAATATAAA
AGTCGGTGTTGTAAATGTTGCTGTTGGAGGCTGTAAAATAGAACTTTTTGATAAGAATAATTTTGAAAGTTATGTCGCTA
ATTCTCCCGACTGGTTAAAAAATATCGTAAAACAATACGACGGTAATCCATACGGGAGATTGGTAGAAATGGCTAAAATT
GCTCAGAAAAAAGGCGTTATAAAAGGCATTCTGCTTCATCAGGGAGAATCAAATACAGGCGATACACTCTGGCCTCAAAA
AGTAAAAATTGTTTATGATAATTTAATTAAAGATCTCAATCTTGATCCGAAAAAAGTACCATTACTTTCCGGAGAAACCG
TAAATGAAGATCAGAATGGTAAATGCGGCAGTATGAATAAGATCATTGCAAAACTGCCTCAGGTACTGCCAAACTCTTAT
ATTATTTCTTCAAAAGGATGTAAAGCAGATGCTGATTTCCTGCATTTCAGCCCCGAAGGTTACAGAGAATTAGGCAAACG
TTATGCCGATAAAATGCTGTCCCTATCAGGATATATGCTATTTAACGGCAAAGAACCTTTTATTGTTCGTGCCCCTCTTG
GATTTGATGAGGTAAACGCAAATGCTCCGCAAGGCAAGGTCGAAATAGTAAGTTACGAATCTAAAACAGTAGGTTCAACC
AGAAAAGCAACTATTTATACGCCTCCGGGATTTAATAAAAATAAAAAATATCCGGTTCTCTATCTGCTTCACGGAATAGG
TGGAGATGAAAAAGAATGGCTAAACGGTGGACAGCCCAATGTTATATTGGATAATCTTTATGCTGATGGAAAGCTTGAAC
CTATGATCGTAGTAATGCCAAACGGCAGAGCAATGAAAGACGACAGAGCCGGCGGCGATATCATGGCGGCAGATAAAGTA
AAAGCTTTTAGTGTTTTTGAAAAAGACCTTTTAAACGATTTAATTCCTTTTATCGAAAAAAAATATCCGGTTTTAAAAGA
CAGGGAACATCGTGCTATTGCAGGTTTATCTATGGGAGGCGGACAGTCTTTAAATTTCGGATTGGGGAATTTAGATCAAT
TTGCGTGGGTTGGAGCTTTTTCGGCTGCGCCTAATACAAAAATAGGAACAGAATTATTAGCAAAACCCGAAGAAGCAAAA
AAGAAACTCAAACTGCTTTGGATTTCATGCGGTGATAAAGACTGGCTTATAGAAAACAGCACCCGCACACATGATTATCT
GGCTAAAAATAATGTTCCTCATATTTACTACATCGAGCCGGGAGTACATGACTTTAAAGTCTGGAAAAATGGACTTTATA
TGTTTTCACAGTTTTTATTTAAAGAGGTTGATCCCTTAGTTTTTCAAAAATACAGCATATCTGCCTATACTATCGAGAAG
TAA

Upstream 100 bases:

>100_bases
AGGATATCAAAGAATGGGAGAAACCGTTGATTTAGATTTGTTTCAATAACACGATTTCACAAGACTAATTTTTAATTGCA
AATTTTAATTAAAGTATAAA

Downstream 100 bases:

>100_bases
TTTTTAATTAAGAGAAAATAAAATGAAAAGTCTTTCAACATGGATTGCTTTATTGATTATTTGTATTTACAGCCCTTTAA
AAGCGGCAGAACCTTTCATT

Product: putative esterase

Products: NA

Alternate protein names: Xylanase Z; 1,4-beta-D-xylan xylanohydrolase Z [H]

Number of amino acids: Translated: 560; Mature: 560

Protein sequence:

>560_residues
MKLIIRFSIFTILFLTAQKGYSQDPNFHVYLSFGQSNMEGFAKIEPQDKTGVNERFQVLSAVDCPEMGREKGKWYTAVPP
LCRCTTGLTPMDYFGRTMISNLPQNIKVGVVNVAVGGCKIELFDKNNFESYVANSPDWLKNIVKQYDGNPYGRLVEMAKI
AQKKGVIKGILLHQGESNTGDTLWPQKVKIVYDNLIKDLNLDPKKVPLLSGETVNEDQNGKCGSMNKIIAKLPQVLPNSY
IISSKGCKADADFLHFSPEGYRELGKRYADKMLSLSGYMLFNGKEPFIVRAPLGFDEVNANAPQGKVEIVSYESKTVGST
RKATIYTPPGFNKNKKYPVLYLLHGIGGDEKEWLNGGQPNVILDNLYADGKLEPMIVVMPNGRAMKDDRAGGDIMAADKV
KAFSVFEKDLLNDLIPFIEKKYPVLKDREHRAIAGLSMGGGQSLNFGLGNLDQFAWVGAFSAAPNTKIGTELLAKPEEAK
KKLKLLWISCGDKDWLIENSTRTHDYLAKNNVPHIYYIEPGVHDFKVWKNGLYMFSQFLFKEVDPLVFQKYSISAYTIEK

Sequences:

>Translated_560_residues
MKLIIRFSIFTILFLTAQKGYSQDPNFHVYLSFGQSNMEGFAKIEPQDKTGVNERFQVLSAVDCPEMGREKGKWYTAVPP
LCRCTTGLTPMDYFGRTMISNLPQNIKVGVVNVAVGGCKIELFDKNNFESYVANSPDWLKNIVKQYDGNPYGRLVEMAKI
AQKKGVIKGILLHQGESNTGDTLWPQKVKIVYDNLIKDLNLDPKKVPLLSGETVNEDQNGKCGSMNKIIAKLPQVLPNSY
IISSKGCKADADFLHFSPEGYRELGKRYADKMLSLSGYMLFNGKEPFIVRAPLGFDEVNANAPQGKVEIVSYESKTVGST
RKATIYTPPGFNKNKKYPVLYLLHGIGGDEKEWLNGGQPNVILDNLYADGKLEPMIVVMPNGRAMKDDRAGGDIMAADKV
KAFSVFEKDLLNDLIPFIEKKYPVLKDREHRAIAGLSMGGGQSLNFGLGNLDQFAWVGAFSAAPNTKIGTELLAKPEEAK
KKLKLLWISCGDKDWLIENSTRTHDYLAKNNVPHIYYIEPGVHDFKVWKNGLYMFSQFLFKEVDPLVFQKYSISAYTIEK
>Mature_560_residues
MKLIIRFSIFTILFLTAQKGYSQDPNFHVYLSFGQSNMEGFAKIEPQDKTGVNERFQVLSAVDCPEMGREKGKWYTAVPP
LCRCTTGLTPMDYFGRTMISNLPQNIKVGVVNVAVGGCKIELFDKNNFESYVANSPDWLKNIVKQYDGNPYGRLVEMAKI
AQKKGVIKGILLHQGESNTGDTLWPQKVKIVYDNLIKDLNLDPKKVPLLSGETVNEDQNGKCGSMNKIIAKLPQVLPNSY
IISSKGCKADADFLHFSPEGYRELGKRYADKMLSLSGYMLFNGKEPFIVRAPLGFDEVNANAPQGKVEIVSYESKTVGST
RKATIYTPPGFNKNKKYPVLYLLHGIGGDEKEWLNGGQPNVILDNLYADGKLEPMIVVMPNGRAMKDDRAGGDIMAADKV
KAFSVFEKDLLNDLIPFIEKKYPVLKDREHRAIAGLSMGGGQSLNFGLGNLDQFAWVGAFSAAPNTKIGTELLAKPEEAK
KKLKLLWISCGDKDWLIENSTRTHDYLAKNNVPHIYYIEPGVHDFKVWKNGLYMFSQFLFKEVDPLVFQKYSISAYTIEK

Specific function: Unknown

COG id: COG2382

COG function: function code P; Enterochelin esterase and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CBM6 (carbohydrate binding type-6) domain [H]

Homologues:

Organism=Escherichia coli, GI145693201, Length=250, Percent_Identity=31.6, Blast_Score=131, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005084
- InterPro:   IPR016134
- InterPro:   IPR002105
- InterPro:   IPR006584
- InterPro:   IPR018242
- InterPro:   IPR018247
- InterPro:   IPR000801
- InterPro:   IPR008979
- InterPro:   IPR001000
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF03422 CBM_6; PF00404 Dockerin_1; PF00756 Esterase; PF00331 Glyco_hydro_10 [H]

EC number: =3.2.1.8 [H]

Molecular weight: Translated: 62703; Mature: 62703

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLIIRFSIFTILFLTAQKGYSQDPNFHVYLSFGQSNMEGFAKIEPQDKTGVNERFQVLS
CEEEEEHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCEEEECCCCCCCHHHHHHHHH
AVDCPEMGREKGKWYTAVPPLCRCTTGLTPMDYFGRTMISNLPQNIKVGVVNVAVGGCKI
HCCCHHHHHHCCCEEECCCCHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEEEEECCEEE
ELFDKNNFESYVANSPDWLKNIVKQYDGNPYGRLVEMAKIAQKKGVIKGILLHQGESNTG
EEEECCCCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCC
DTLWPQKVKIVYDNLIKDLNLDPKKVPLLSGETVNEDQNGKCGSMNKIIAKLPQVLPNSY
CCCCCHHHHHHHHHHHHHCCCCHHHCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCE
IISSKGCKADADFLHFSPEGYRELGKRYADKMLSLSGYMLFNGKEPFIVRAPLGFDEVNA
EEECCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEECCCCHHHCCC
NAPQGKVEIVSYESKTVGSTRKATIYTPPGFNKNKKYPVLYLLHGIGGDEKEWLNGGQPN
CCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCCC
VILDNLYADGKLEPMIVVMPNGRAMKDDRAGGDIMAADKVKAFSVFEKDLLNDLIPFIEK
EEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHH
KYPVLKDREHRAIAGLSMGGGQSLNFGLGNLDQFAWVGAFSAAPNTKIGTELLAKPEEAK
CCCCCCCCCCCEEEEEECCCCCEEECCCCCCHHHHHEEEECCCCCCCCCHHHHCCCHHHH
KKLKLLWISCGDKDWLIENSTRTHDYLAKNNVPHIYYIEPGVHDFKVWKNGLYMFSQFLF
CEEEEEEEEECCCCEEEECCCCCHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHH
KEVDPLVFQKYSISAYTIEK
HHCCHHHEEEECCEEEEECC
>Mature Secondary Structure
MKLIIRFSIFTILFLTAQKGYSQDPNFHVYLSFGQSNMEGFAKIEPQDKTGVNERFQVLS
CEEEEEHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCEEEECCCCCCCHHHHHHHHH
AVDCPEMGREKGKWYTAVPPLCRCTTGLTPMDYFGRTMISNLPQNIKVGVVNVAVGGCKI
HCCCHHHHHHCCCEEECCCCHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEEEEECCEEE
ELFDKNNFESYVANSPDWLKNIVKQYDGNPYGRLVEMAKIAQKKGVIKGILLHQGESNTG
EEEECCCCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCC
DTLWPQKVKIVYDNLIKDLNLDPKKVPLLSGETVNEDQNGKCGSMNKIIAKLPQVLPNSY
CCCCCHHHHHHHHHHHHHCCCCHHHCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCE
IISSKGCKADADFLHFSPEGYRELGKRYADKMLSLSGYMLFNGKEPFIVRAPLGFDEVNA
EEECCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEECCCCHHHCCC
NAPQGKVEIVSYESKTVGSTRKATIYTPPGFNKNKKYPVLYLLHGIGGDEKEWLNGGQPN
CCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCCC
VILDNLYADGKLEPMIVVMPNGRAMKDDRAGGDIMAADKVKAFSVFEKDLLNDLIPFIEK
EEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHH
KYPVLKDREHRAIAGLSMGGGQSLNFGLGNLDQFAWVGAFSAAPNTKIGTELLAKPEEAK
CCCCCCCCCCCEEEEEECCCCCEEECCCCCCHHHHHEEEECCCCCCCCCHHHHCCCHHHH
KKLKLLWISCGDKDWLIENSTRTHDYLAKNNVPHIYYIEPGVHDFKVWKNGLYMFSQFLF
CEEEEEEEEECCCCEEEECCCCCHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHH
KEVDPLVFQKYSISAYTIEK
HHCCHHHEEEECCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3139632; 7664125 [H]