Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
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Accession | NC_009441 |
Length | 6,096,872 |
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The map label for this gene is 146301595
Identifier: 146301595
GI number: 146301595
Start: 4568791
End: 4570089
Strand: Reverse
Name: 146301595
Synonym: Fjoh_3856
Alternate gene names: NA
Gene position: 4570089-4568791 (Counterclockwise)
Preceding gene: 146301596
Following gene: 146301594
Centisome position: 74.96
GC content: 38.34
Gene sequence:
>1299_bases ATGAAAAAATTTTTTCTATTTGCAATGGTGGCTCTAGTTGTGAGCTCTTGCCAAAATGATGATTCTTCTGCAGATTCTTC TTTTTCAATGAAAGCTTCTGGTGCTGATTACGTTCATCCTGCAACGGTTCAAACAGTAAGCGGTGCTATTACAAGCAACA CAACTTGGACAAACGACAGAGTTTGGGAAATCGATGGTGTTATCACTGTAAAAGATGGTGCTAAATTAACTATTCAGGCT GGTACATTTATTAAAGCAAAACCTCTTGCAACAGGTATTGCAACGGGAGTTTTGGTAATTACTAAAACAGGTCAGATTGA TGCACAGGGAACTGCAGAATCTCCAATTATTTTTACAAGTTATAATTTATTAGACGACAACGCTAATACTGTTGCTTCGC CAGGAGATTTTGGGGGAGTTGTTATTTTAGGAGACGCAGAGGTTAATACTGGTTCTACAACAAATATTGTTGAAGGATTA GATGACCAGCCTAATTTTGCTGAATTCTACTATGGAGGTTCAAACAATGCTCACAATGCGGGAATCCTAAGCTATGTACG TATCGAATTTGCAGGACGTATTTTAGATACAGATGTTGAAATCAACGGTTTAACATTGGCTGGTGTTGGAAACGGAACTA CTGTTAACCACATTCAGGTATCTTATGGAAAAGACGATTCATTTGAATTTTTCGGAGGTAAAGTAAACGCTACTCATTTA GTATCTTTTGCTCCGGATGATGACAACTTCGATTTCGATTTTGGTTACACAGGAAGCATTACAAAAGCTATTGCACTTGC TGACAGTAATTCAACTCACAGTTTAAGCGGTGGTAATCCTGATTCTAACGGTATCGAATTAGATAACAATGCAACAGGAG CAATTACTTCAATTATTACACGTCCGGTTATTTCTCAATTGTCTATCATTGGTGTTAGTTCTACAACAGTAGCTGATTTG TATGAAAATGCAATTCACGTGCGCAGAGCAGGAAACATCAGCCTTACAGATGTGACTGTAACAGGATACAATACAGGAAT TAGATGGGAAGCTCCATCAGTTCCAAGCGGTTCATCTTATTTAAGAGTTTCAATCCACGGATTTGATAACGTAGCGTTGC CAGCAGGAACAACTTTGTCTGGGCCTGGTACAACTACTTCTACAGTAAACCCAGCTACAAAATGGAGTCTTTCACAGCCT TTCTTTAATGATGGTTCTCTTAATTTTACAGGAGCTACCGGAGCATTTAGAACAGAAGCTAACTGGACTAACTCTTGGAC AAAATTTTCTAATTTCTAA
Upstream 100 bases:
>100_bases ATCTTTACCAAAAACGAGAAAGACCTAAGGAAAGATATTTTGCTGCTCTCTCCAAAGGCCTAGTTTGATTAGCAGCAAAT ATAGCAATAATTAAATTATT
Downstream 100 bases:
>100_bases TTAGATAAAAACAGCTTACTTACATAAATACTGCATGGGCAGAGAAATCTGCCCATATTTAAAATAAAAAATATGAAAAA AACTTTACTTTTTTTAGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: Outer Membrane Lipoprotein; Serine/Threonine Protein Kinase; Cell Surface Receptor IPT/TIG Domain Protein; Secreted Protein; Drug/Metabolite Permease; Non-Specific Serine/Threonine Protein Kinase; Parallel Beta-Helix Repeat Protein
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MKKFFLFAMVALVVSSCQNDDSSADSSFSMKASGADYVHPATVQTVSGAITSNTTWTNDRVWEIDGVITVKDGAKLTIQA GTFIKAKPLATGIATGVLVITKTGQIDAQGTAESPIIFTSYNLLDDNANTVASPGDFGGVVILGDAEVNTGSTTNIVEGL DDQPNFAEFYYGGSNNAHNAGILSYVRIEFAGRILDTDVEINGLTLAGVGNGTTVNHIQVSYGKDDSFEFFGGKVNATHL VSFAPDDDNFDFDFGYTGSITKAIALADSNSTHSLSGGNPDSNGIELDNNATGAITSIITRPVISQLSIIGVSSTTVADL YENAIHVRRAGNISLTDVTVTGYNTGIRWEAPSVPSGSSYLRVSIHGFDNVALPAGTTLSGPGTTTSTVNPATKWSLSQP FFNDGSLNFTGATGAFRTEANWTNSWTKFSNF
Sequences:
>Translated_432_residues MKKFFLFAMVALVVSSCQNDDSSADSSFSMKASGADYVHPATVQTVSGAITSNTTWTNDRVWEIDGVITVKDGAKLTIQA GTFIKAKPLATGIATGVLVITKTGQIDAQGTAESPIIFTSYNLLDDNANTVASPGDFGGVVILGDAEVNTGSTTNIVEGL DDQPNFAEFYYGGSNNAHNAGILSYVRIEFAGRILDTDVEINGLTLAGVGNGTTVNHIQVSYGKDDSFEFFGGKVNATHL VSFAPDDDNFDFDFGYTGSITKAIALADSNSTHSLSGGNPDSNGIELDNNATGAITSIITRPVISQLSIIGVSSTTVADL YENAIHVRRAGNISLTDVTVTGYNTGIRWEAPSVPSGSSYLRVSIHGFDNVALPAGTTLSGPGTTTSTVNPATKWSLSQP FFNDGSLNFTGATGAFRTEANWTNSWTKFSNF >Mature_432_residues MKKFFLFAMVALVVSSCQNDDSSADSSFSMKASGADYVHPATVQTVSGAITSNTTWTNDRVWEIDGVITVKDGAKLTIQA GTFIKAKPLATGIATGVLVITKTGQIDAQGTAESPIIFTSYNLLDDNANTVASPGDFGGVVILGDAEVNTGSTTNIVEGL DDQPNFAEFYYGGSNNAHNAGILSYVRIEFAGRILDTDVEINGLTLAGVGNGTTVNHIQVSYGKDDSFEFFGGKVNATHL VSFAPDDDNFDFDFGYTGSITKAIALADSNSTHSLSGGNPDSNGIELDNNATGAITSIITRPVISQLSIIGVSSTTVADL YENAIHVRRAGNISLTDVTVTGYNTGIRWEAPSVPSGSSYLRVSIHGFDNVALPAGTTLSGPGTTTSTVNPATKWSLSQP FFNDGSLNFTGATGAFRTEANWTNSWTKFSNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45369; Mature: 45369
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFFLFAMVALVVSSCQNDDSSADSSFSMKASGADYVHPATVQTVSGAITSNTTWTNDR CCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCEEECCEEECCCEECCCE VWEIDGVITVKDGAKLTIQAGTFIKAKPLATGIATGVLVITKTGQIDAQGTAESPIIFTS EEEECCEEEECCCCEEEEECCCEEEECCCHHCCCCEEEEEEECCCCCCCCCCCCCEEEEE YNLLDDNANTVASPGDFGGVVILGDAEVNTGSTTNIVEGLDDQPNFAEFYYGGSNNAHNA EEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHCCCCCCCEEEEEECCCCCCCCC GILSYVRIEFAGRILDTDVEINGLTLAGVGNGTTVNHIQVSYGKDDSFEFFGGKVNATHL CEEEEEEEEECCEEEECCEEECCEEEEECCCCCEEEEEEEEECCCCCEEEECCEECEEEE VSFAPDDDNFDFDFGYTGSITKAIALADSNSTHSLSGGNPDSNGIELDNNATGAITSIIT EEECCCCCCCEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHH RPVISQLSIIGVSSTTVADLYENAIHVRRAGNISLTDVTVTGYNTGIRWEAPSVPSGSSY HHHHHHEEEEECCCHHHHHHHHHHEEEEECCCEEEEEEEEECCCCCEEEECCCCCCCCCE LRVSIHGFDNVALPAGTTLSGPGTTTSTVNPATKWSLSQPFFNDGSLNFTGATGAFRTEA EEEEEECCCCEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECC NWTNSWTKFSNF CCCCCCEECCCC >Mature Secondary Structure MKKFFLFAMVALVVSSCQNDDSSADSSFSMKASGADYVHPATVQTVSGAITSNTTWTNDR CCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCEEECCEEECCCEECCCE VWEIDGVITVKDGAKLTIQAGTFIKAKPLATGIATGVLVITKTGQIDAQGTAESPIIFTS EEEECCEEEECCCCEEEEECCCEEEECCCHHCCCCEEEEEEECCCCCCCCCCCCCEEEEE YNLLDDNANTVASPGDFGGVVILGDAEVNTGSTTNIVEGLDDQPNFAEFYYGGSNNAHNA EEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHCCCCCCCEEEEEECCCCCCCCC GILSYVRIEFAGRILDTDVEINGLTLAGVGNGTTVNHIQVSYGKDDSFEFFGGKVNATHL CEEEEEEEEECCEEEECCEEECCEEEEECCCCCEEEEEEEEECCCCCEEEECCEECEEEE VSFAPDDDNFDFDFGYTGSITKAIALADSNSTHSLSGGNPDSNGIELDNNATGAITSIIT EEECCCCCCCEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHH RPVISQLSIIGVSSTTVADLYENAIHVRRAGNISLTDVTVTGYNTGIRWEAPSVPSGSSY HHHHHHEEEEECCCHHHHHHHHHHEEEEECCCEEEEEEEEECCCCCEEEECCCCCCCCCE LRVSIHGFDNVALPAGTTLSGPGTTTSTVNPATKWSLSQPFFNDGSLNFTGATGAFRTEA EEEEEECCCCEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECC NWTNSWTKFSNF CCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA