Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
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Accession | NC_009441 |
Length | 6,096,872 |
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The map label for this gene is 146301500
Identifier: 146301500
GI number: 146301500
Start: 4458749
End: 4460014
Strand: Reverse
Name: 146301500
Synonym: Fjoh_3761
Alternate gene names: NA
Gene position: 4460014-4458749 (Counterclockwise)
Preceding gene: 146301501
Following gene: 146301499
Centisome position: 73.15
GC content: 49.45
Gene sequence:
>1266_bases ATGGTTGCAGTGATAAAGACCGGACACTGCGTGCGGGCGGTTGTCAATTACAATGAAAACAAAGTCAAACAAGCAAAGGC CCAGTGCATCGGGGAAGGGAATTATCCTATGGAAGTTTCGCGTATGAACCTTTCAATGAAACTCAGCCGGTTGCTGCATC AGAATGCCCTGAATGAAAATGTGAAAAGAAACAGCGTGCACATCTCACTGAACTTTCACCCCAGCGAGAACTATTCAAAA GAAAAGCTGCTCCAAATTGCGGCCGCTTATATGGAAAAAATTGGTTTTGCGCAGCAGCCGTATCTGGTCTACCAGCATCA TGATGCGGGGCACCCCCACATCCATCTGGTGTCCATCAAAGTAAGGGAAGACGGATCGAGAATTGACATGCAGAACATCG GCAGGAACCAGTCGGAAAAGGCCCGAAAAGAAATTGAAAAAGAGTTTAATCTGGTGCGGGCAGAAGGGAATAAAAAACAG GAGACACCGCTGCTGAAACCTGCCGCTGCGGGTAAAGTTCTGTACGGGAAAACCGAATCCAAAAGGGCGCTCTCCGGGGT GCTGGAGTCCGTGCTTTTGAACTATACATACGGTTCGCTTGCCGAGCTTAATGCCGTGCTGCAGCTCTATAATATCAAGG CCGACAGGGGCAGCGTCGATTCGAGGATTTTTAAGTCCGGCGGACTGGTGTACCGCATACTGGACCAGGATGGAAAAGCG GCAGGGATTCCCATCAAGGCAAGTGATTTATCCCTGCGCCCCACACTTGGTTTTCTGGAAAAAAGATTTGCCTTGAACAG TACCGAAAGGATCTCTGAAAAAAAGAGGATCCGAAGTGCTGTGGACCGTATTTTTTTCGCAAAGCAAATCCGTCTGGACA AGCTCATGCTGCTGCTGGAAAAGGAAGGAATCAGTATGGTGCTGCGCAAAAGTGATGCCGGTCTGGTATACGGTCTGACC TATGTGGACCATGTTACCAGAAGCGTGTTTAACGGCAGCGCGCTGGGAAGAAATTACAGCGCCAAAGCAGTATTGGAGCG CTGTGGGGCTGCGGGCGGGAAAGAGAAGCCCCAAGCGGCCGGTGAGGTTTTGAAAAACAAAGCAGATCTAAGTGAGAAGC AGTCTGCTGGGAATACCATTCAGGGGAGCAGCACCAAAGAACTGGAAGAACTCATGAAGCCCGAATGGCAGGGAGAGTAC AGCAGCGGAAAGTTTAAGGCAAGACGCAGGAAAAGAAAAAGAAAGAGACGTTCGGATCTGAATTAA
Upstream 100 bases:
>100_bases CCGAATTCAGGGATTGGATCACCAGCACCGAAGCCCAGCGCGCAGAGCTGCTGGAGAAGATCCAAACCATTGAGAGACTA ATGGAGAAAACGGCTGAAAA
Downstream 100 bases:
>100_bases TCCTGAACCAGTAACCGTAAAAACAGACAGCTATGCAGACAGGAGAAAATGAACAGGCACTGAGAAAAATACTCGATATG ACAAGACTGATGAGCATCAT
Product: relaxase/mobilization nuclease family protein
Products: NA
Alternate protein names: Relaxase/Mobilization Nuclease Family Protein; MobB Protein; Mobilisation Protein; Relaxase/Mobilization Nuclease Domain Protein
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MVAVIKTGHCVRAVVNYNENKVKQAKAQCIGEGNYPMEVSRMNLSMKLSRLLHQNALNENVKRNSVHISLNFHPSENYSK EKLLQIAAAYMEKIGFAQQPYLVYQHHDAGHPHIHLVSIKVREDGSRIDMQNIGRNQSEKARKEIEKEFNLVRAEGNKKQ ETPLLKPAAAGKVLYGKTESKRALSGVLESVLLNYTYGSLAELNAVLQLYNIKADRGSVDSRIFKSGGLVYRILDQDGKA AGIPIKASDLSLRPTLGFLEKRFALNSTERISEKKRIRSAVDRIFFAKQIRLDKLMLLLEKEGISMVLRKSDAGLVYGLT YVDHVTRSVFNGSALGRNYSAKAVLERCGAAGGKEKPQAAGEVLKNKADLSEKQSAGNTIQGSSTKELEELMKPEWQGEY SSGKFKARRRKRKRKRRSDLN
Sequences:
>Translated_421_residues MVAVIKTGHCVRAVVNYNENKVKQAKAQCIGEGNYPMEVSRMNLSMKLSRLLHQNALNENVKRNSVHISLNFHPSENYSK EKLLQIAAAYMEKIGFAQQPYLVYQHHDAGHPHIHLVSIKVREDGSRIDMQNIGRNQSEKARKEIEKEFNLVRAEGNKKQ ETPLLKPAAAGKVLYGKTESKRALSGVLESVLLNYTYGSLAELNAVLQLYNIKADRGSVDSRIFKSGGLVYRILDQDGKA AGIPIKASDLSLRPTLGFLEKRFALNSTERISEKKRIRSAVDRIFFAKQIRLDKLMLLLEKEGISMVLRKSDAGLVYGLT YVDHVTRSVFNGSALGRNYSAKAVLERCGAAGGKEKPQAAGEVLKNKADLSEKQSAGNTIQGSSTKELEELMKPEWQGEY SSGKFKARRRKRKRKRRSDLN >Mature_421_residues MVAVIKTGHCVRAVVNYNENKVKQAKAQCIGEGNYPMEVSRMNLSMKLSRLLHQNALNENVKRNSVHISLNFHPSENYSK EKLLQIAAAYMEKIGFAQQPYLVYQHHDAGHPHIHLVSIKVREDGSRIDMQNIGRNQSEKARKEIEKEFNLVRAEGNKKQ ETPLLKPAAAGKVLYGKTESKRALSGVLESVLLNYTYGSLAELNAVLQLYNIKADRGSVDSRIFKSGGLVYRILDQDGKA AGIPIKASDLSLRPTLGFLEKRFALNSTERISEKKRIRSAVDRIFFAKQIRLDKLMLLLEKEGISMVLRKSDAGLVYGLT YVDHVTRSVFNGSALGRNYSAKAVLERCGAAGGKEKPQAAGEVLKNKADLSEKQSAGNTIQGSSTKELEELMKPEWQGEY SSGKFKARRRKRKRKRRSDLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47172; Mature: 47172
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAVIKTGHCVRAVVNYNENKVKQAKAQCIGEGNYPMEVSRMNLSMKLSRLLHQNALNEN CEEEEECCCCEEHHHCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHCC VKRNSVHISLNFHPSENYSKEKLLQIAAAYMEKIGFAQQPYLVYQHHDAGHPHIHLVSIK CCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEEE VREDGSRIDMQNIGRNQSEKARKEIEKEFNLVRAEGNKKQETPLLKPAAAGKVLYGKTES EECCCCEECHHHCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCEEECCCHH KRALSGVLESVLLNYTYGSLAELNAVLQLYNIKADRGSVDSRIFKSGGLVYRILDQDGKA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEEEECCCCCC AGIPIKASDLSLRPTLGFLEKRFALNSTERISEKKRIRSAVDRIFFAKQIRLDKLMLLLE CCCEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KEGISMVLRKSDAGLVYGLTYVDHVTRSVFNGSALGRNYSAKAVLERCGAAGGKEKPQAA HCCCEEEEEECCCCEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHH GEVLKNKADLSEKQSAGNTIQGSSTKELEELMKPEWQGEYSSGKFKARRRKRKRKRRSDL HHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC N C >Mature Secondary Structure MVAVIKTGHCVRAVVNYNENKVKQAKAQCIGEGNYPMEVSRMNLSMKLSRLLHQNALNEN CEEEEECCCCEEHHHCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHCC VKRNSVHISLNFHPSENYSKEKLLQIAAAYMEKIGFAQQPYLVYQHHDAGHPHIHLVSIK CCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEEE VREDGSRIDMQNIGRNQSEKARKEIEKEFNLVRAEGNKKQETPLLKPAAAGKVLYGKTES EECCCCEECHHHCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCEEECCCHH KRALSGVLESVLLNYTYGSLAELNAVLQLYNIKADRGSVDSRIFKSGGLVYRILDQDGKA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEEEECCCCCC AGIPIKASDLSLRPTLGFLEKRFALNSTERISEKKRIRSAVDRIFFAKQIRLDKLMLLLE CCCEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KEGISMVLRKSDAGLVYGLTYVDHVTRSVFNGSALGRNYSAKAVLERCGAAGGKEKPQAA HCCCEEEEEECCCCEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHH GEVLKNKADLSEKQSAGNTIQGSSTKELEELMKPEWQGEYSSGKFKARRRKRKRKRRSDL HHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC N C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA