Click here to switch to the map view.

The map label for this gene is 146301499

Identifier: 146301499

GI number: 146301499

Start: 4456740

End: 4458716

Strand: Reverse

Name: 146301499

Synonym: Fjoh_3760

Alternate gene names: NA

Gene position: 4458716-4456740 (Counterclockwise)

Preceding gene: 146301500

Following gene: 146301495

Centisome position: 73.13

GC content: 47.14

Gene sequence:

>1977_bases
ATGCAGACAGGAGAAAATGAACAGGCACTGAGAAAAATACTCGATATGACAAGACTGATGAGCATCATGGTGCTGCTGCT
GCATTTTTATTATTACTGTTATGGGGCATTCCGGTTCTGGGACCTGACAGGAACTTTAGCAGATCAGATTTTAACTTCGG
TTTATAAGACCGGACTGTTTGGCAGTTTTCATTTTTCCAAATGTATTTCGCTGGGGCTGCTTGTGATTTCACTGCTCGGC
GCCAAGGGAAGAAAGGACGAAAAAAGACAGTTTAAAACGGCTTTTTATTATACGGCTTTCGGACTGGCGCTGTATTTTCT
GAGTGGTACGGCGCTGCTCTTTTACGGGTCCGAGCCGCTTCTTGCAGCGCTGTATATAGGGACAACTGTTCTGGGTTTTC
TGCTGGTGCTCTCGGGAGGCACAATGCTCTCCCGCATTATTAAAAACAGACTCCCTGATGCGGATATTTTTAACAGCGAA
AATGAAACCTTTCCCCAGGAAGAACGACTGCTGGAAAATGAATATTCGATCAACCTTCCGGCGCGTTATTACCGCAGGGA
CAAAATCCGAAACAGCTGGATCAACATCATCAATCCTTTCCGCGGCCTGCTTGTTTTGGGTACGCCGGGTTCAGGCAAAT
CCTATTTTGTAATCCGTCATCTCATCACCCAGCATATTGCCAAGGGATTCAGCATGTTTGTCTATGATTTCAAATACGAT
GACCTGTCCAAAATCGTTTACAATACTTTTGAGAAATACAAACACGCCTACACAGTGGTGCCGAAATGTTACTTCATTAA
TTTTGATGCAATCATGCACCGCTGCAATCCGCTGGATCCGCAGAGTATGGAAGATATAACCGATGCCTCGGAATCCGCAC
GCACTATCCTTCTGGGGCTCAACCGGGAGTGGATCAAACGCCAGGGCGACTTTTTTGTGGAATCGCCGATCAATTTTTTA
TCGGCCGTGATCTGGTATCTCAGAAGGTACAAGAATGGGGAATTCTGCACCCTGCCGCACGTTATTGAACTCATGCAGGC
CGACTATGACAGCCTCTTTACCCTGCTGCGCACCGATAAGGAAATTGAGGTGCTCATCAACCCTTTTGTCAATGCATATC
TTAACGATGCCATGGAACAGCTCGAAGGACAGATTGCCTCGGCTAAAATAGCCATGGCCCGGCTTTCTTCCCCCCAGCTC
TATTATGTATTATCGGGAAATGATTTTACCCTGGACATTAATAATCCCCTGGAGCCCAAGATTGTCTGCATGGGAAACAA
CCCGCAGAAAATACAGATTTACGGCGCTGTTTTATCGCTCTATGTCAACCGGCTGATCAAACTGGTCAACAAAAAAGGAA
AGCTCAAATCCAGTCTTATTTTTGATGAGTTTCCCACTATTTATCTCAACAACATGGACAGCCTGATTGCTACGGCCAGA
AGCAACAAAGTGAGCACCTGCCTGGGGATACAGGATTTCAGCCAGCTCAGAAAAGACTATGGGCGCGAACAGGCCGACGT
GATCATGAACCTCACCGGAAATATCATATCAGGGCAGGTGGCAGGGGATACGGCCAAACAGCTTTCGGAACGTTTCGGGA
AGATCATGCAGGACAGGGAAAGTATTTCCATCAACAGTTCGGATGCCTCCATCAGCCGCTCCAGACAATTGGAAGCCGCC
GTGCCGCCATCCAAGATTTCATCGCTCAGTTCAGGGGAATTTGTGGGCATGACTGCCGATGATCCGCAGTGCCGCATCAA
ACTGAAAACCTTTCACTGTGAGATTGTAAACGACCATGAAGCGCTGCGCAGGGAAGAGGAAAACTATACGGAAATACCGC
CTGTGCGGCATTTGGATTCCGGGATGATACAGCGGAATTTCCAGCAGATCAAGTGTGATGTGCAGGATATTATTTATACC
GAGATGGAAAGACTTCTCAATGACCCCGCGCAGCAGCATCTTATTGTAAAGAAGTGA

Upstream 100 bases:

>100_bases
ACAGCAGCGGAAAGTTTAAGGCAAGACGCAGGAAAAGAAAAAGAAAGAGACGTTCGGATCTGAATTAATCCTGAACCAGT
AACCGTAAAAACAGACAGCT

Downstream 100 bases:

>100_bases
GATCTTTTCGGGTATTTTCTTTGGCGTGTTTTTGGATGACTGCCTGTGAAATCTTATGTAGACCACTGCCCTTAATGTTG
ATTTCGATCAAAAGATAAGA

Product: Type IV secretory pathway VirD4 components-like protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 658; Mature: 658

Protein sequence:

>658_residues
MQTGENEQALRKILDMTRLMSIMVLLLHFYYYCYGAFRFWDLTGTLADQILTSVYKTGLFGSFHFSKCISLGLLVISLLG
AKGRKDEKRQFKTAFYYTAFGLALYFLSGTALLFYGSEPLLAALYIGTTVLGFLLVLSGGTMLSRIIKNRLPDADIFNSE
NETFPQEERLLENEYSINLPARYYRRDKIRNSWINIINPFRGLLVLGTPGSGKSYFVIRHLITQHIAKGFSMFVYDFKYD
DLSKIVYNTFEKYKHAYTVVPKCYFINFDAIMHRCNPLDPQSMEDITDASESARTILLGLNREWIKRQGDFFVESPINFL
SAVIWYLRRYKNGEFCTLPHVIELMQADYDSLFTLLRTDKEIEVLINPFVNAYLNDAMEQLEGQIASAKIAMARLSSPQL
YYVLSGNDFTLDINNPLEPKIVCMGNNPQKIQIYGAVLSLYVNRLIKLVNKKGKLKSSLIFDEFPTIYLNNMDSLIATAR
SNKVSTCLGIQDFSQLRKDYGREQADVIMNLTGNIISGQVAGDTAKQLSERFGKIMQDRESISINSSDASISRSRQLEAA
VPPSKISSLSSGEFVGMTADDPQCRIKLKTFHCEIVNDHEALRREEENYTEIPPVRHLDSGMIQRNFQQIKCDVQDIIYT
EMERLLNDPAQQHLIVKK

Sequences:

>Translated_658_residues
MQTGENEQALRKILDMTRLMSIMVLLLHFYYYCYGAFRFWDLTGTLADQILTSVYKTGLFGSFHFSKCISLGLLVISLLG
AKGRKDEKRQFKTAFYYTAFGLALYFLSGTALLFYGSEPLLAALYIGTTVLGFLLVLSGGTMLSRIIKNRLPDADIFNSE
NETFPQEERLLENEYSINLPARYYRRDKIRNSWINIINPFRGLLVLGTPGSGKSYFVIRHLITQHIAKGFSMFVYDFKYD
DLSKIVYNTFEKYKHAYTVVPKCYFINFDAIMHRCNPLDPQSMEDITDASESARTILLGLNREWIKRQGDFFVESPINFL
SAVIWYLRRYKNGEFCTLPHVIELMQADYDSLFTLLRTDKEIEVLINPFVNAYLNDAMEQLEGQIASAKIAMARLSSPQL
YYVLSGNDFTLDINNPLEPKIVCMGNNPQKIQIYGAVLSLYVNRLIKLVNKKGKLKSSLIFDEFPTIYLNNMDSLIATAR
SNKVSTCLGIQDFSQLRKDYGREQADVIMNLTGNIISGQVAGDTAKQLSERFGKIMQDRESISINSSDASISRSRQLEAA
VPPSKISSLSSGEFVGMTADDPQCRIKLKTFHCEIVNDHEALRREEENYTEIPPVRHLDSGMIQRNFQQIKCDVQDIIYT
EMERLLNDPAQQHLIVKK
>Mature_658_residues
MQTGENEQALRKILDMTRLMSIMVLLLHFYYYCYGAFRFWDLTGTLADQILTSVYKTGLFGSFHFSKCISLGLLVISLLG
AKGRKDEKRQFKTAFYYTAFGLALYFLSGTALLFYGSEPLLAALYIGTTVLGFLLVLSGGTMLSRIIKNRLPDADIFNSE
NETFPQEERLLENEYSINLPARYYRRDKIRNSWINIINPFRGLLVLGTPGSGKSYFVIRHLITQHIAKGFSMFVYDFKYD
DLSKIVYNTFEKYKHAYTVVPKCYFINFDAIMHRCNPLDPQSMEDITDASESARTILLGLNREWIKRQGDFFVESPINFL
SAVIWYLRRYKNGEFCTLPHVIELMQADYDSLFTLLRTDKEIEVLINPFVNAYLNDAMEQLEGQIASAKIAMARLSSPQL
YYVLSGNDFTLDINNPLEPKIVCMGNNPQKIQIYGAVLSLYVNRLIKLVNKKGKLKSSLIFDEFPTIYLNNMDSLIATAR
SNKVSTCLGIQDFSQLRKDYGREQADVIMNLTGNIISGQVAGDTAKQLSERFGKIMQDRESISINSSDASISRSRQLEAA
VPPSKISSLSSGEFVGMTADDPQCRIKLKTFHCEIVNDHEALRREEENYTEIPPVRHLDSGMIQRNFQQIKCDVQDIIYT
EMERLLNDPAQQHLIVKK

Specific function: Unknown

COG id: COG3505

COG function: function code U; Type IV secretory pathway, VirD4 components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75198; Mature: 75198

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTGENEQALRKILDMTRLMSIMVLLLHFYYYCYGAFRFWDLTGTLADQILTSVYKTGLF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHCCC
GSFHFSKCISLGLLVISLLGAKGRKDEKRQFKTAFYYTAFGLALYFLSGTALLFYGSEPL
CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHH
LAALYIGTTVLGFLLVLSGGTMLSRIIKNRLPDADIFNSENETFPQEERLLENEYSINLP
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCEECCC
ARYYRRDKIRNSWINIINPFRGLLVLGTPGSGKSYFVIRHLITQHIAKGFSMFVYDFKYD
HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCC
DLSKIVYNTFEKYKHAYTVVPKCYFINFDAIMHRCNPLDPQSMEDITDASESARTILLGL
HHHHHHHHHHHHHHHHEEEECEEEEEEHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEC
NREWIKRQGDFFVESPINFLSAVIWYLRRYKNGEFCTLPHVIELMQADYDSLFTLLRTDK
CHHHHHHCCCEEEECHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCHHHHHHHHHCCC
EIEVLINPFVNAYLNDAMEQLEGQIASAKIAMARLSSPQLYYVLSGNDFTLDINNPLEPK
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEEEEECCEEEEECCCCCCCE
IVCMGNNPQKIQIYGAVLSLYVNRLIKLVNKKGKLKSSLIFDEFPTIYLNNMDSLIATAR
EEEECCCCCEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEECCHHHHHHHHC
SNKVSTCLGIQDFSQLRKDYGREQADVIMNLTGNIISGQVAGDTAKQLSERFGKIMQDRE
CCCCHHHCCHHHHHHHHHHHCCCHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHCCC
SISINSSDASISRSRQLEAAVPPSKISSLSSGEFVGMTADDPQCRIKLKTFHCEIVNDHE
CCEECCCCCHHHHHCCCCCCCCHHHHHCCCCCCEEEECCCCCCEEEEEEEEEEEEECCHH
ALRREEENYTEIPPVRHLDSGMIQRNFQQIKCDVQDIIYTEMERLLNDPAQQHLIVKK
HHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCC
>Mature Secondary Structure
MQTGENEQALRKILDMTRLMSIMVLLLHFYYYCYGAFRFWDLTGTLADQILTSVYKTGLF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHCCC
GSFHFSKCISLGLLVISLLGAKGRKDEKRQFKTAFYYTAFGLALYFLSGTALLFYGSEPL
CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHH
LAALYIGTTVLGFLLVLSGGTMLSRIIKNRLPDADIFNSENETFPQEERLLENEYSINLP
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCEECCC
ARYYRRDKIRNSWINIINPFRGLLVLGTPGSGKSYFVIRHLITQHIAKGFSMFVYDFKYD
HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCC
DLSKIVYNTFEKYKHAYTVVPKCYFINFDAIMHRCNPLDPQSMEDITDASESARTILLGL
HHHHHHHHHHHHHHHHEEEECEEEEEEHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEC
NREWIKRQGDFFVESPINFLSAVIWYLRRYKNGEFCTLPHVIELMQADYDSLFTLLRTDK
CHHHHHHCCCEEEECHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCHHHHHHHHHCCC
EIEVLINPFVNAYLNDAMEQLEGQIASAKIAMARLSSPQLYYVLSGNDFTLDINNPLEPK
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEEEEECCEEEEECCCCCCCE
IVCMGNNPQKIQIYGAVLSLYVNRLIKLVNKKGKLKSSLIFDEFPTIYLNNMDSLIATAR
EEEECCCCCEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEECCHHHHHHHHC
SNKVSTCLGIQDFSQLRKDYGREQADVIMNLTGNIISGQVAGDTAKQLSERFGKIMQDRE
CCCCHHHCCHHHHHHHHHHHCCCHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHCCC
SISINSSDASISRSRQLEAAVPPSKISSLSSGEFVGMTADDPQCRIKLKTFHCEIVNDHE
CCEECCCCCHHHHHCCCCCCCCHHHHHCCCCCCEEEECCCCCCEEEEEEEEEEEEECCHH
ALRREEENYTEIPPVRHLDSGMIQRNFQQIKCDVQDIIYTEMERLLNDPAQQHLIVKK
HHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA