Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
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Accession | NC_009441 |
Length | 6,096,872 |
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The map label for this gene is 146301487
Identifier: 146301487
GI number: 146301487
Start: 4444069
End: 4444503
Strand: Reverse
Name: 146301487
Synonym: Fjoh_3746
Alternate gene names: NA
Gene position: 4444503-4444069 (Counterclockwise)
Preceding gene: 146301488
Following gene: 146301486
Centisome position: 72.9
GC content: 38.85
Gene sequence:
>435_bases ATGGAAAAAGAAGATAATGGAGTTGTAAAAGCTCTGACGAAACAGGAAATAAATACCATTGAAAGGTTTTATGCAGCGTG GAACCTTAAAAAGCCAGAAGTACTGGATGAAATCTGCATGCCCGACTGGAAAGATATTCCACTGGCACCGCAGCAAGAAG ATAATCCAAAAGGACTGCAGGCAATTATGAAATTTTTGTTCGAATTATGTCCCGATATAGAAATTGTAATTCATGAGATA TTTGGCAGCCATGAGCGTGCAGCGGTAAGAGCTTCAATGCAGTTTACGCATGTAAATGAAATTATGGGAATTGCTCCAAC GAATAAGAAAGTAACAGTAGCGCTGCACGAATTTCATTATTTGAAAAATGGTAAACTGACCCATACCTGGCATTTAGAAG ACTGGTTTGGTCTTGTAATGCAGAGCAAGCAATAA
Upstream 100 bases:
>100_bases CGTATCGAAATTTCGGGAGGTTCAAATTTATGATCAAGCTTAAAAATAGTTAGCATATTGTTGAAAAACTGAATTTTACA GATAATTAGAAGCATATAAA
Downstream 100 bases:
>100_bases AAATCAAATAGCATATTGTCTAATAATTTTTTGAATATACTTTTAAAAGTACCCATGAGAATTAAGAGTGTCAAAAAACT GTAAATTTGCAGCTATGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MEKEDNGVVKALTKQEINTIERFYAAWNLKKPEVLDEICMPDWKDIPLAPQQEDNPKGLQAIMKFLFELCPDIEIVIHEI FGSHERAAVRASMQFTHVNEIMGIAPTNKKVTVALHEFHYLKNGKLTHTWHLEDWFGLVMQSKQ
Sequences:
>Translated_144_residues MEKEDNGVVKALTKQEINTIERFYAAWNLKKPEVLDEICMPDWKDIPLAPQQEDNPKGLQAIMKFLFELCPDIEIVIHEI FGSHERAAVRASMQFTHVNEIMGIAPTNKKVTVALHEFHYLKNGKLTHTWHLEDWFGLVMQSKQ >Mature_144_residues MEKEDNGVVKALTKQEINTIERFYAAWNLKKPEVLDEICMPDWKDIPLAPQQEDNPKGLQAIMKFLFELCPDIEIVIHEI FGSHERAAVRASMQFTHVNEIMGIAPTNKKVTVALHEFHYLKNGKLTHTWHLEDWFGLVMQSKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16714; Mature: 16714
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKEDNGVVKALTKQEINTIERFYAAWNLKKPEVLDEICMPDWKDIPLAPQQEDNPKGLQ CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHH AIMKFLFELCPDIEIVIHEIFGSHERAAVRASMQFTHVNEIMGIAPTNKKVTVALHEFHY HHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHH LKNGKLTHTWHLEDWFGLVMQSKQ HCCCCEEEEEEHHHHHHHHHCCCC >Mature Secondary Structure MEKEDNGVVKALTKQEINTIERFYAAWNLKKPEVLDEICMPDWKDIPLAPQQEDNPKGLQ CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHH AIMKFLFELCPDIEIVIHEIFGSHERAAVRASMQFTHVNEIMGIAPTNKKVTVALHEFHY HHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHH LKNGKLTHTWHLEDWFGLVMQSKQ HCCCCEEEEEEHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA