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The map label for this gene is xylR [C]

Identifier: 146301486

GI number: 146301486

Start: 4443063

End: 4443974

Strand: Reverse

Name: xylR [C]

Synonym: Fjoh_3745

Alternate gene names: 146301486

Gene position: 4443974-4443063 (Counterclockwise)

Preceding gene: 146301487

Following gene: 146301483

Centisome position: 72.89

GC content: 34.54

Gene sequence:

>912_bases
ATGGAAGTAATTAGAATAAAAAGCATCACAGAGTATCATCGGTTTAGAGGTCTTCCAAAGCCGGAACATCCACTAGTAAG
TCTGGTCGATTATTCACAGGTAAAATTCCCGGATGATGAAAATACGACAAACATGGTGATGGATTTTTATTCTATTGCTT
TAAAACGGGATATTGGAGCCAAGCTCTATTATGGCCAGCAGCTTTACGATTTTGACGAAGGTATAATGTCATTTATAGCA
CCAGGGCAGGTCCTGCGACTGGAGCAGGATCCTGATTCATTACATAATGGCACGGGGTATTTATTGCAAATTCACCCAGA
CTTTTTATGGAATTCATCATTAGCAAAAAATATTAAGAGCTACACGTTTTTTGATTATTCAATTAATGAAGCACTATTTC
TTTCTGAAAAAGAAGAAAATACCATTGTAAGTATTTTTGAAAATATAAGAGACGAATACCATACCAATATTGATAGATTT
ACGCAAGATTTAATAATTGCGCAGATAGAATTGCTGCTCAAATATTGCGACAGATATTACAGCCGCCAGTTTCTTACAAG
AAAAATCAGCAGTCATCAAATACTATCAAAAGTGGAAGATTTTTTGAATAATTATTTTGATGATAAAAACCGGGATGAAA
GAAATCTTCTTTCTGTCCAGACCGTTGCTGATAATATGAATGTTTCCTCAGATTATTTAAGCAGTTTACTGAAGCTTCAT
ACAGGTCAGAATACGCAGCAGCATATTCACAATAAACTCATAGAAAAAGCGAAAGAAAAACTTGCTGCCACTAATTTGTC
AATTGGTGAAATTGCGTATGAACTGGGATTCGAACACCTTCAGAGCTTTAGTAAATTCTTCAAAAACAAAACAAATGCAA
CACCTTTAAAGTTCAGAGCTAAGTTTAATTAA

Upstream 100 bases:

>100_bases
CAATAAAAATCAAATAGCATATTGTCTAATAATTTTTTGAATATACTTTTAAAAGTACCCATGAGAATTAAGAGTGTCAA
AAAACTGTAAATTTGCAGCT

Downstream 100 bases:

>100_bases
TTCTTTTGTATTTTCAAGTTTTTTCAAAATTCTCTATTTAAATAAAAAAGCAAAGCGGTCTTAAAGAAGAGTCGGAAACT
AAAATGAAACTAAAATGAAA

Product: helix-turn-helix domain-containing protein

Products: NA

Alternate protein names: Transcriptional Regulator; AraC Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator Arac Family; Transcriptional Regulator AraC Family Protein; Helix-Turn-Helix- Domain Containing Protein AraC Type; Transcription Regulator; Transcriptional Regulator AraC Type

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MEVIRIKSITEYHRFRGLPKPEHPLVSLVDYSQVKFPDDENTTNMVMDFYSIALKRDIGAKLYYGQQLYDFDEGIMSFIA
PGQVLRLEQDPDSLHNGTGYLLQIHPDFLWNSSLAKNIKSYTFFDYSINEALFLSEKEENTIVSIFENIRDEYHTNIDRF
TQDLIIAQIELLLKYCDRYYSRQFLTRKISSHQILSKVEDFLNNYFDDKNRDERNLLSVQTVADNMNVSSDYLSSLLKLH
TGQNTQQHIHNKLIEKAKEKLAATNLSIGEIAYELGFEHLQSFSKFFKNKTNATPLKFRAKFN

Sequences:

>Translated_303_residues
MEVIRIKSITEYHRFRGLPKPEHPLVSLVDYSQVKFPDDENTTNMVMDFYSIALKRDIGAKLYYGQQLYDFDEGIMSFIA
PGQVLRLEQDPDSLHNGTGYLLQIHPDFLWNSSLAKNIKSYTFFDYSINEALFLSEKEENTIVSIFENIRDEYHTNIDRF
TQDLIIAQIELLLKYCDRYYSRQFLTRKISSHQILSKVEDFLNNYFDDKNRDERNLLSVQTVADNMNVSSDYLSSLLKLH
TGQNTQQHIHNKLIEKAKEKLAATNLSIGEIAYELGFEHLQSFSKFFKNKTNATPLKFRAKFN
>Mature_303_residues
MEVIRIKSITEYHRFRGLPKPEHPLVSLVDYSQVKFPDDENTTNMVMDFYSIALKRDIGAKLYYGQQLYDFDEGIMSFIA
PGQVLRLEQDPDSLHNGTGYLLQIHPDFLWNSSLAKNIKSYTFFDYSINEALFLSEKEENTIVSIFENIRDEYHTNIDRF
TQDLIIAQIELLLKYCDRYYSRQFLTRKISSHQILSKVEDFLNNYFDDKNRDERNLLSVQTVADNMNVSSDYLSSLLKLH
TGQNTQQHIHNKLIEKAKEKLAATNLSIGEIAYELGFEHLQSFSKFFKNKTNATPLKFRAKFN

Specific function: Regulatory Protein For The Xylbafghr Operon. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35476; Mature: 35476

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVIRIKSITEYHRFRGLPKPEHPLVSLVDYSQVKFPDDENTTNMVMDFYSIALKRDIGA
CCEEEEHHHHHHHHHCCCCCCCCCCEEHHCCCCEECCCCCCHHHHHHHHHHHHHHHHCCC
KLYYGQQLYDFDEGIMSFIAPGQVLRLEQDPDSLHNGTGYLLQIHPDFLWNSSLAKNIKS
EEEECCHHHHHHHHHHHHHCCCCEEEECCCCHHHHCCCCEEEEECCCHHHCCHHHHHHHH
YTFFDYSINEALFLSEKEENTIVSIFENIRDEYHTNIDRFTQDLIIAQIELLLKYCDRYY
CEEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
SRQFLTRKISSHQILSKVEDFLNNYFDDKNRDERNLLSVQTVADNMNVSSDYLSSLLKLH
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH
TGQNTQQHIHNKLIEKAKEKLAATNLSIGEIAYELGFEHLQSFSKFFKNKTNATPLKFRA
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
KFN
CCC
>Mature Secondary Structure
MEVIRIKSITEYHRFRGLPKPEHPLVSLVDYSQVKFPDDENTTNMVMDFYSIALKRDIGA
CCEEEEHHHHHHHHHCCCCCCCCCCEEHHCCCCEECCCCCCHHHHHHHHHHHHHHHHCCC
KLYYGQQLYDFDEGIMSFIAPGQVLRLEQDPDSLHNGTGYLLQIHPDFLWNSSLAKNIKS
EEEECCHHHHHHHHHHHHHCCCCEEEECCCCHHHHCCCCEEEEECCCHHHCCHHHHHHHH
YTFFDYSINEALFLSEKEENTIVSIFENIRDEYHTNIDRFTQDLIIAQIELLLKYCDRYY
CEEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
SRQFLTRKISSHQILSKVEDFLNNYFDDKNRDERNLLSVQTVADNMNVSSDYLSSLLKLH
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH
TGQNTQQHIHNKLIEKAKEKLAATNLSIGEIAYELGFEHLQSFSKFFKNKTNATPLKFRA
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
KFN
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA