Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is fabG [H]

Identifier: 146301483

GI number: 146301483

Start: 4439982

End: 4440665

Strand: Reverse

Name: fabG [H]

Synonym: Fjoh_3742

Alternate gene names: 146301483

Gene position: 4440665-4439982 (Counterclockwise)

Preceding gene: 146301486

Following gene: 146301482

Centisome position: 72.84

GC content: 42.4

Gene sequence:

>684_bases
ATGAAAACTATTGTAATTGTTGGCGGCAGTAAAGGAATCGGTAATGGTGTTTTAGTGCAGCAGCTGGAAAATTATAAGGT
AATCAATATCAGCAGAACAGCTCCCGATATTACCCATCCAAATTTAATTCATTTTTCAGTTGATGTGCTCCGTGATGCTT
TGCCTGAATTTGAAAGTATAGATGCCCTGGTGTATTGTCCGGGGTCCATAAACCTCAAACCCATTCTGGGCTTAAGCCTG
GATGATTTCAGAAAAGATTTTGAAATTAACGTGATGGGTGCCGTCAAAGTGATTCAGCATTATCTGCCTGCGTTAAAGAA
AGGCGAAAAACCTTCTATTGTTTTATTCAGTACCGTTGCGGCAAAGCTCGGAATGCCTTTTCACTCCAGTATTGCAGCCT
CTAAGGCAGCAGTGGAGGGTCTGGTTAAATCGCTCGGTGCTGAACTTGCCCCGTTAATTCGTATAAATGGTATTGCCCCG
ACTATTACAGAGACTTCTTTGTCGGAATCTATTTTAAGAAACGACCGTATGAAAGAAAATATGATCGAGCGCCACCCCTT
GAAAAATTACCTCAAGCCCGCAGAGGTGGCCCGCATGGCAGGGTATCTTATTTCTGAAGATGCAGCATCAATTTCAGGCC
AGATTTTCGCGATGGATTATGGTTTGGTAAGCTTTAAATTGTAA

Upstream 100 bases:

>100_bases
CCGCTTTTGGTCCTTTTGATATTTTATAAATACTATCTTATTTAATTGAAAATCATAGCATAAACAATCAGAACGGTTCT
TTAATTCTAATCTTAAAAAA

Downstream 100 bases:

>100_bases
AACAGCTCAGAGATGAAAATTTTATTAACAGGTGCTACAGGTTATATCGGCAAGAGGCTGCTGCCCTTGCTCCTGGATCA
CCGAAATGAGGTGGTCTGCT

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MKTIVIVGGSKGIGNGVLVQQLENYKVINISRTAPDITHPNLIHFSVDVLRDALPEFESIDALVYCPGSINLKPILGLSL
DDFRKDFEINVMGAVKVIQHYLPALKKGEKPSIVLFSTVAAKLGMPFHSSIAASKAAVEGLVKSLGAELAPLIRINGIAP
TITETSLSESILRNDRMKENMIERHPLKNYLKPAEVARMAGYLISEDAASISGQIFAMDYGLVSFKL

Sequences:

>Translated_227_residues
MKTIVIVGGSKGIGNGVLVQQLENYKVINISRTAPDITHPNLIHFSVDVLRDALPEFESIDALVYCPGSINLKPILGLSL
DDFRKDFEINVMGAVKVIQHYLPALKKGEKPSIVLFSTVAAKLGMPFHSSIAASKAAVEGLVKSLGAELAPLIRINGIAP
TITETSLSESILRNDRMKENMIERHPLKNYLKPAEVARMAGYLISEDAASISGQIFAMDYGLVSFKL
>Mature_227_residues
MKTIVIVGGSKGIGNGVLVQQLENYKVINISRTAPDITHPNLIHFSVDVLRDALPEFESIDALVYCPGSINLKPILGLSL
DDFRKDFEINVMGAVKVIQHYLPALKKGEKPSIVLFSTVAAKLGMPFHSSIAASKAAVEGLVKSLGAELAPLIRINGIAP
TITETSLSESILRNDRMKENMIERHPLKNYLKPAEVARMAGYLISEDAASISGQIFAMDYGLVSFKL

Specific function: Siderophore biosynthesis; enterobactin biosynthesis. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI7705925, Length=235, Percent_Identity=25.9574468085106, Blast_Score=78, Evalue=6e-15,
Organism=Homo sapiens, GI32483357, Length=148, Percent_Identity=31.0810810810811, Blast_Score=72, Evalue=4e-13,
Organism=Escherichia coli, GI1786812, Length=245, Percent_Identity=27.7551020408163, Blast_Score=77, Evalue=8e-16,
Organism=Escherichia coli, GI87082100, Length=249, Percent_Identity=26.9076305220884, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI1788459, Length=166, Percent_Identity=28.3132530120482, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1787335, Length=241, Percent_Identity=21.9917012448133, Blast_Score=61, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17560676, Length=184, Percent_Identity=26.0869565217391, Blast_Score=67, Evalue=9e-12,
Organism=Saccharomyces cerevisiae, GI6324126, Length=176, Percent_Identity=26.7045454545455, Blast_Score=71, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24643142, Length=234, Percent_Identity=29.4871794871795, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI21355319, Length=143, Percent_Identity=28.6713286713287, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI23397609, Length=242, Percent_Identity=26.8595041322314, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 24644; Mature: 24644

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIVIVGGSKGIGNGVLVQQLENYKVINISRTAPDITHPNLIHFSVDVLRDALPEFESI
CCEEEEEECCCCCCCCHHHHHHCCEEEEEEECCCCCCCCCCEEEEEHHHHHHHCCCHHCC
DALVYCPGSINLKPILGLSLDDFRKDFEINVMGAVKVIQHYLPALKKGEKPSIVLFSTVA
CEEEECCCCCCCCEEECCCHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCCCCEEEEEHHH
AKLGMPFHSSIAASKAAVEGLVKSLGAELAPLIRINGIAPTITETSLSESILRNDRMKEN
HHHCCCCHHHHHHHHHHHHHHHHHHCHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHH
MIERHPLKNYLKPAEVARMAGYLISEDAASISGQIFAMDYGLVSFKL
HHHHCCHHHHCCHHHHHHHHHHHHCCCCHHCCCEEEEEECCEEEECC
>Mature Secondary Structure
MKTIVIVGGSKGIGNGVLVQQLENYKVINISRTAPDITHPNLIHFSVDVLRDALPEFESI
CCEEEEEECCCCCCCCHHHHHHCCEEEEEEECCCCCCCCCCEEEEEHHHHHHHCCCHHCC
DALVYCPGSINLKPILGLSLDDFRKDFEINVMGAVKVIQHYLPALKKGEKPSIVLFSTVA
CEEEECCCCCCCCEEECCCHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCCCCEEEEEHHH
AKLGMPFHSSIAASKAAVEGLVKSLGAELAPLIRINGIAPTITETSLSESILRNDRMKEN
HHHCCCCHHHHHHHHHHHHHHHHHHCHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHH
MIERHPLKNYLKPAEVARMAGYLISEDAASISGQIFAMDYGLVSFKL
HHHHCCHHHHCCHHHHHHHHHHHHCCCCHHCCCEEEEEECCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]