Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
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Accession | NC_009441 |
Length | 6,096,872 |
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The map label for this gene is fabG [H]
Identifier: 146301483
GI number: 146301483
Start: 4439982
End: 4440665
Strand: Reverse
Name: fabG [H]
Synonym: Fjoh_3742
Alternate gene names: 146301483
Gene position: 4440665-4439982 (Counterclockwise)
Preceding gene: 146301486
Following gene: 146301482
Centisome position: 72.84
GC content: 42.4
Gene sequence:
>684_bases ATGAAAACTATTGTAATTGTTGGCGGCAGTAAAGGAATCGGTAATGGTGTTTTAGTGCAGCAGCTGGAAAATTATAAGGT AATCAATATCAGCAGAACAGCTCCCGATATTACCCATCCAAATTTAATTCATTTTTCAGTTGATGTGCTCCGTGATGCTT TGCCTGAATTTGAAAGTATAGATGCCCTGGTGTATTGTCCGGGGTCCATAAACCTCAAACCCATTCTGGGCTTAAGCCTG GATGATTTCAGAAAAGATTTTGAAATTAACGTGATGGGTGCCGTCAAAGTGATTCAGCATTATCTGCCTGCGTTAAAGAA AGGCGAAAAACCTTCTATTGTTTTATTCAGTACCGTTGCGGCAAAGCTCGGAATGCCTTTTCACTCCAGTATTGCAGCCT CTAAGGCAGCAGTGGAGGGTCTGGTTAAATCGCTCGGTGCTGAACTTGCCCCGTTAATTCGTATAAATGGTATTGCCCCG ACTATTACAGAGACTTCTTTGTCGGAATCTATTTTAAGAAACGACCGTATGAAAGAAAATATGATCGAGCGCCACCCCTT GAAAAATTACCTCAAGCCCGCAGAGGTGGCCCGCATGGCAGGGTATCTTATTTCTGAAGATGCAGCATCAATTTCAGGCC AGATTTTCGCGATGGATTATGGTTTGGTAAGCTTTAAATTGTAA
Upstream 100 bases:
>100_bases CCGCTTTTGGTCCTTTTGATATTTTATAAATACTATCTTATTTAATTGAAAATCATAGCATAAACAATCAGAACGGTTCT TTAATTCTAATCTTAAAAAA
Downstream 100 bases:
>100_bases AACAGCTCAGAGATGAAAATTTTATTAACAGGTGCTACAGGTTATATCGGCAAGAGGCTGCTGCCCTTGCTCCTGGATCA CCGAAATGAGGTGGTCTGCT
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MKTIVIVGGSKGIGNGVLVQQLENYKVINISRTAPDITHPNLIHFSVDVLRDALPEFESIDALVYCPGSINLKPILGLSL DDFRKDFEINVMGAVKVIQHYLPALKKGEKPSIVLFSTVAAKLGMPFHSSIAASKAAVEGLVKSLGAELAPLIRINGIAP TITETSLSESILRNDRMKENMIERHPLKNYLKPAEVARMAGYLISEDAASISGQIFAMDYGLVSFKL
Sequences:
>Translated_227_residues MKTIVIVGGSKGIGNGVLVQQLENYKVINISRTAPDITHPNLIHFSVDVLRDALPEFESIDALVYCPGSINLKPILGLSL DDFRKDFEINVMGAVKVIQHYLPALKKGEKPSIVLFSTVAAKLGMPFHSSIAASKAAVEGLVKSLGAELAPLIRINGIAP TITETSLSESILRNDRMKENMIERHPLKNYLKPAEVARMAGYLISEDAASISGQIFAMDYGLVSFKL >Mature_227_residues MKTIVIVGGSKGIGNGVLVQQLENYKVINISRTAPDITHPNLIHFSVDVLRDALPEFESIDALVYCPGSINLKPILGLSL DDFRKDFEINVMGAVKVIQHYLPALKKGEKPSIVLFSTVAAKLGMPFHSSIAASKAAVEGLVKSLGAELAPLIRINGIAP TITETSLSESILRNDRMKENMIERHPLKNYLKPAEVARMAGYLISEDAASISGQIFAMDYGLVSFKL
Specific function: Siderophore biosynthesis; enterobactin biosynthesis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI7705925, Length=235, Percent_Identity=25.9574468085106, Blast_Score=78, Evalue=6e-15, Organism=Homo sapiens, GI32483357, Length=148, Percent_Identity=31.0810810810811, Blast_Score=72, Evalue=4e-13, Organism=Escherichia coli, GI1786812, Length=245, Percent_Identity=27.7551020408163, Blast_Score=77, Evalue=8e-16, Organism=Escherichia coli, GI87082100, Length=249, Percent_Identity=26.9076305220884, Blast_Score=74, Evalue=7e-15, Organism=Escherichia coli, GI1788459, Length=166, Percent_Identity=28.3132530120482, Blast_Score=62, Evalue=2e-11, Organism=Escherichia coli, GI1787335, Length=241, Percent_Identity=21.9917012448133, Blast_Score=61, Evalue=7e-11, Organism=Caenorhabditis elegans, GI17560676, Length=184, Percent_Identity=26.0869565217391, Blast_Score=67, Evalue=9e-12, Organism=Saccharomyces cerevisiae, GI6324126, Length=176, Percent_Identity=26.7045454545455, Blast_Score=71, Evalue=2e-13, Organism=Drosophila melanogaster, GI24643142, Length=234, Percent_Identity=29.4871794871795, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI21355319, Length=143, Percent_Identity=28.6713286713287, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI23397609, Length=242, Percent_Identity=26.8595041322314, Blast_Score=65, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 24644; Mature: 24644
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTIVIVGGSKGIGNGVLVQQLENYKVINISRTAPDITHPNLIHFSVDVLRDALPEFESI CCEEEEEECCCCCCCCHHHHHHCCEEEEEEECCCCCCCCCCEEEEEHHHHHHHCCCHHCC DALVYCPGSINLKPILGLSLDDFRKDFEINVMGAVKVIQHYLPALKKGEKPSIVLFSTVA CEEEECCCCCCCCEEECCCHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCCCCEEEEEHHH AKLGMPFHSSIAASKAAVEGLVKSLGAELAPLIRINGIAPTITETSLSESILRNDRMKEN HHHCCCCHHHHHHHHHHHHHHHHHHCHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHH MIERHPLKNYLKPAEVARMAGYLISEDAASISGQIFAMDYGLVSFKL HHHHCCHHHHCCHHHHHHHHHHHHCCCCHHCCCEEEEEECCEEEECC >Mature Secondary Structure MKTIVIVGGSKGIGNGVLVQQLENYKVINISRTAPDITHPNLIHFSVDVLRDALPEFESI CCEEEEEECCCCCCCCHHHHHHCCEEEEEEECCCCCCCCCCEEEEEHHHHHHHCCCHHCC DALVYCPGSINLKPILGLSLDDFRKDFEINVMGAVKVIQHYLPALKKGEKPSIVLFSTVA CEEEECCCCCCCCEEECCCHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCCCCEEEEEHHH AKLGMPFHSSIAASKAAVEGLVKSLGAELAPLIRINGIAPTITETSLSESILRNDRMKEN HHHCCCCHHHHHHHHHHHHHHHHHHCHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHH MIERHPLKNYLKPAEVARMAGYLISEDAASISGQIFAMDYGLVSFKL HHHHCCHHHHCCHHHHHHHHHHHHCCCCHHCCCEEEEEECCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]