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The map label for this gene is yfjY [C]

Identifier: 146301404

GI number: 146301404

Start: 4356067

End: 4356531

Strand: Direct

Name: yfjY [C]

Synonym: Fjoh_3662

Alternate gene names: 146301404

Gene position: 4356067-4356531 (Clockwise)

Preceding gene: 146301401

Following gene: 146301419

Centisome position: 71.45

GC content: 36.34

Gene sequence:

>465_bases
ATGGAAACTTTAAATCAAAAATGGCAGATTGTATCGGAAATTGAATTAATCTACAAATCAAAAATCAAAACCTCTGAAAG
ACCTCAGATCAAATCATCCAAAGACGCTTACTTACTTTTGAAATCCTCATGGGATCAGGGTAAGATAGATTATTTTGAAC
AATTCAAGATCTTGTTTCTGAATCATTCATTCAAAGCCTTAGGACTTTACGAAATGTCCTCGGGAGGAATAACAGGAACT
ATAGTAGATCTTCGCATGATATTTTCGGCAGCCCTTAAAGCAAATGCTACAAACATTATGATTACACATAATCATCCCTC
AGGAAATACAAGCCCTTCAGAAGCAGATAAACATATGACTGCAAAGATCAGACAGGCAGGTGAACTGCTTGATATAAAAC
TATTGGATCATCTAATCATAACCTCGGAGACTTACTACTCCTTTGCGGATGAAGGAGCCTTATAG

Upstream 100 bases:

>100_bases
CATAAATGCAGGATATAAATCCTGCTTTATTGCGTTGCTTTTTGCGCTTGCTGGATGATTTCCAATTGATGTTCCATAAT
TAATTTAAAATTTAAAAATT

Downstream 100 bases:

>100_bases
GCGCCATGTACCATTTTTTATATTGGAATACTCTGCAAATTTATCTTTGAATGCCAGGCTTTGTCTTTCCATACTTTATC
ATCTTTCGAATATCCCCAAC

Product: DNA repair protein RadC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
METLNQKWQIVSEIELIYKSKIKTSERPQIKSSKDAYLLLKSSWDQGKIDYFEQFKILFLNHSFKALGLYEMSSGGITGT
IVDLRMIFSAALKANATNIMITHNHPSGNTSPSEADKHMTAKIRQAGELLDIKLLDHLIITSETYYSFADEGAL

Sequences:

>Translated_154_residues
METLNQKWQIVSEIELIYKSKIKTSERPQIKSSKDAYLLLKSSWDQGKIDYFEQFKILFLNHSFKALGLYEMSSGGITGT
IVDLRMIFSAALKANATNIMITHNHPSGNTSPSEADKHMTAKIRQAGELLDIKLLDHLIITSETYYSFADEGAL
>Mature_154_residues
METLNQKWQIVSEIELIYKSKIKTSERPQIKSSKDAYLLLKSSWDQGKIDYFEQFKILFLNHSFKALGLYEMSSGGITGT
IVDLRMIFSAALKANATNIMITHNHPSGNTSPSEADKHMTAKIRQAGELLDIKLLDHLIITSETYYSFADEGAL

Specific function: Unknown

COG id: COG2003

COG function: function code L; DNA repair proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0758 family [H]

Homologues:

Organism=Escherichia coli, GI1788997, Length=102, Percent_Identity=41.1764705882353, Blast_Score=89, Evalue=1e-19,
Organism=Escherichia coli, GI2367100, Length=102, Percent_Identity=39.2156862745098, Blast_Score=87, Evalue=7e-19,
Organism=Escherichia coli, GI1788312, Length=102, Percent_Identity=38.2352941176471, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI87082300, Length=100, Percent_Identity=36, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003583
- InterPro:   IPR010994
- InterPro:   IPR001405
- InterPro:   IPR020891 [H]

Pfam domain/function: PF04002 DUF2466 [H]

EC number: NA

Molecular weight: Translated: 17389; Mature: 17389

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: PS01302 RADC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METLNQKWQIVSEIELIYKSKIKTSERPQIKSSKDAYLLLKSSWDQGKIDYFEQFKILFL
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHCEEEEEE
NHSFKALGLYEMSSGGITGTIVDLRMIFSAALKANATNIMITHNHPSGNTSPSEADKHMT
ECCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHH
AKIRQAGELLDIKLLDHLIITSETYYSFADEGAL
HHHHHCCCEEHHHHHHHHHHCCCHHCCCCCCCCC
>Mature Secondary Structure
METLNQKWQIVSEIELIYKSKIKTSERPQIKSSKDAYLLLKSSWDQGKIDYFEQFKILFL
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHCEEEEEE
NHSFKALGLYEMSSGGITGTIVDLRMIFSAALKANATNIMITHNHPSGNTSPSEADKHMT
ECCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHH
AKIRQAGELLDIKLLDHLIITSETYYSFADEGAL
HHHHHCCCEEHHHHHHHHHHCCCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA