The gene/protein map for NC_009441 is currently unavailable.
Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146301396

Identifier: 146301396

GI number: 146301396

Start: 4344952

End: 4346196

Strand: Direct

Name: 146301396

Synonym: Fjoh_3654

Alternate gene names: NA

Gene position: 4344952-4346196 (Clockwise)

Preceding gene: 146301395

Following gene: 146301397

Centisome position: 71.27

GC content: 34.78

Gene sequence:

>1245_bases
ATGGTTGCAGTCATAAAAACCAGCCGTTCCATAAACAGCATTCTGAATTACAATGAAAACAAAGTTAAGGAAGGAGTTGC
TGAGTGCATCAGTGCCGTGAACTATCCTCTTAAATTAGAGAATTTAAACTTTACCCATAAGCTGAACCGCTTTTTAAAAC
TGTCATCATTGAATCAAAATGCAAAGCGGAACAGCGTTCATATTTCACTCAACTTTGATCCTTCGGAAAATCATTCTAAA
GAAAAGCTGATTGAAATTGCAGAAACTTATATGGAAAAAATAGGTTTTGGAAGACAGCCCTATTTAGTGTATCAGCACCA
TGATGCAGGGCATCCGCACCTGCATTTGGTCACAAACAATATTCAAAGAGACGGGAAAAGAATTGATCTGCATCTGATAG
GCGTTAAAAAATCAGAGACTGCAAGAAAAGAGATAGAAGAAATTTTCGGACTGGTAAAAGCTGAAGGAAGAAAGCAGAAA
AAAGATTTCTCTTTAAAGCCGATAGATGTAGGCAAAATTCAATACGGAAAGGTAGAGTCTAGGAAGGCGATCAATTCAGT
TTTAAACAAAATTCTATTTGAGTATAAATATTCTAGCCTGCCTGAACTCAATGCAGTTTTAAACCTTTACAATGTTCATG
CCGACAGAGGAAGCGAAGAATCGAGAGTTTTTAAAAATTACGGACTTCTTTACAAGATACTTGACCAGAATTCAAAGCCG
ATTGGAGTGCCCATAAAAGCAAGCGAATTCTACAGCAGGCCTACCTTAAAATTTCTGGAAGGAAAGTTTAAAACTAATGA
AGTGCAGAAAGAATCATCCAAAAGGCATGTAAAGAATGCCATAAAACTAGCTTTTATTCGTGAAAACATATTTTCGCCCG
AAAAATTATCCAAGATATTGGAACAAGAAAGCATTCATATGATATTAAGAAAAAGCAATGAAGGACAGCTTTACGGAATA
ACCTATGTTGACCATAAAACCAGATCCGTCTTCAACGGAAGCAGTCTGGGGAAAGAATTCAGTGCAAAAGGAATTCAGGA
GAGCTGTGCTATGAATATTCTTGAACTTGAAAGAAAGCATCAAAATTCTGTTTCAACAAATTCTGAGAATTTTCAAGATA
TTGAATCGAAAAAGTATGTAAAAGAAAATCTTGTTGATATACTTTTTCGTGGGGAAAAAGTATATGATTATATTTCAGAA
CAAATCAAACGAACAAAAAGAAAAAAAATACATAGAAAAATATAA

Upstream 100 bases:

>100_bases
CCGACTTCAAAGGGCATCTGTATCTGTTTGAAGTGCAGAGAAAAAAGCTTTCTGATAAAATGGAAGAAATTTCAAGCCAC
ACCCAAAAAATATCGGAACA

Downstream 100 bases:

>100_bases
AATCTTTAATTACGGAAAACCGTATTTATATGACAATTTATAGTATTAATTTTATTTTAAAATAACCAATATTAAAATTT
TAATAACAAGTATAAATACT

Product: relaxase/mobilization nuclease family protein

Products: NA

Alternate protein names: Relaxase/Mobilization Nuclease Family Protein; MobB Protein; Mobilisation Protein; Relaxase/Mobilization Nuclease Domain Protein

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MVAVIKTSRSINSILNYNENKVKEGVAECISAVNYPLKLENLNFTHKLNRFLKLSSLNQNAKRNSVHISLNFDPSENHSK
EKLIEIAETYMEKIGFGRQPYLVYQHHDAGHPHLHLVTNNIQRDGKRIDLHLIGVKKSETARKEIEEIFGLVKAEGRKQK
KDFSLKPIDVGKIQYGKVESRKAINSVLNKILFEYKYSSLPELNAVLNLYNVHADRGSEESRVFKNYGLLYKILDQNSKP
IGVPIKASEFYSRPTLKFLEGKFKTNEVQKESSKRHVKNAIKLAFIRENIFSPEKLSKILEQESIHMILRKSNEGQLYGI
TYVDHKTRSVFNGSSLGKEFSAKGIQESCAMNILELERKHQNSVSTNSENFQDIESKKYVKENLVDILFRGEKVYDYISE
QIKRTKRKKIHRKI

Sequences:

>Translated_414_residues
MVAVIKTSRSINSILNYNENKVKEGVAECISAVNYPLKLENLNFTHKLNRFLKLSSLNQNAKRNSVHISLNFDPSENHSK
EKLIEIAETYMEKIGFGRQPYLVYQHHDAGHPHLHLVTNNIQRDGKRIDLHLIGVKKSETARKEIEEIFGLVKAEGRKQK
KDFSLKPIDVGKIQYGKVESRKAINSVLNKILFEYKYSSLPELNAVLNLYNVHADRGSEESRVFKNYGLLYKILDQNSKP
IGVPIKASEFYSRPTLKFLEGKFKTNEVQKESSKRHVKNAIKLAFIRENIFSPEKLSKILEQESIHMILRKSNEGQLYGI
TYVDHKTRSVFNGSSLGKEFSAKGIQESCAMNILELERKHQNSVSTNSENFQDIESKKYVKENLVDILFRGEKVYDYISE
QIKRTKRKKIHRKI
>Mature_414_residues
MVAVIKTSRSINSILNYNENKVKEGVAECISAVNYPLKLENLNFTHKLNRFLKLSSLNQNAKRNSVHISLNFDPSENHSK
EKLIEIAETYMEKIGFGRQPYLVYQHHDAGHPHLHLVTNNIQRDGKRIDLHLIGVKKSETARKEIEEIFGLVKAEGRKQK
KDFSLKPIDVGKIQYGKVESRKAINSVLNKILFEYKYSSLPELNAVLNLYNVHADRGSEESRVFKNYGLLYKILDQNSKP
IGVPIKASEFYSRPTLKFLEGKFKTNEVQKESSKRHVKNAIKLAFIRENIFSPEKLSKILEQESIHMILRKSNEGQLYGI
TYVDHKTRSVFNGSSLGKEFSAKGIQESCAMNILELERKHQNSVSTNSENFQDIESKKYVKENLVDILFRGEKVYDYISE
QIKRTKRKKIHRKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47826; Mature: 47826

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAVIKTSRSINSILNYNENKVKEGVAECISAVNYPLKLENLNFTHKLNRFLKLSSLNQN
CEEEEECCHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHCCCC
AKRNSVHISLNFDPSENHSKEKLIEIAETYMEKIGFGRQPYLVYQHHDAGHPHLHLVTNN
CCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEECC
IQRDGKRIDLHLIGVKKSETARKEIEEIFGLVKAEGRKQKKDFSLKPIDVGKIQYGKVES
HHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCHH
RKAINSVLNKILFEYKYSSLPELNAVLNLYNVHADRGSEESRVFKNYGLLYKILDQNSKP
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCHHEEEECCCCCC
IGVPIKASEFYSRPTLKFLEGKFKTNEVQKESSKRHVKNAIKLAFIRENIFSPEKLSKIL
CCCEEEHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
EQESIHMILRKSNEGQLYGITYVDHKTRSVFNGSSLGKEFSAKGIQESCAMNILELERKH
HHHHHHEEEEECCCCCEEEEEEECCCHHHHCCCHHCCHHHHHCCHHHHHHHHHHHHHHHH
QNSVSTNSENFQDIESKKYVKENLVDILFRGEKVYDYISEQIKRTKRKKIHRKI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVAVIKTSRSINSILNYNENKVKEGVAECISAVNYPLKLENLNFTHKLNRFLKLSSLNQN
CEEEEECCHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHCCCC
AKRNSVHISLNFDPSENHSKEKLIEIAETYMEKIGFGRQPYLVYQHHDAGHPHLHLVTNN
CCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEECC
IQRDGKRIDLHLIGVKKSETARKEIEEIFGLVKAEGRKQKKDFSLKPIDVGKIQYGKVES
HHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCHH
RKAINSVLNKILFEYKYSSLPELNAVLNLYNVHADRGSEESRVFKNYGLLYKILDQNSKP
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCHHEEEECCCCCC
IGVPIKASEFYSRPTLKFLEGKFKTNEVQKESSKRHVKNAIKLAFIRENIFSPEKLSKIL
CCCEEEHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
EQESIHMILRKSNEGQLYGITYVDHKTRSVFNGSSLGKEFSAKGIQESCAMNILELERKH
HHHHHHEEEEECCCCCEEEEEEECCCHHHHCCCHHCCHHHHHCCHHHHHHHHHHHHHHHH
QNSVSTNSENFQDIESKKYVKENLVDILFRGEKVYDYISEQIKRTKRKKIHRKI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA