| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301336
Identifier: 146301336
GI number: 146301336
Start: 4288639
End: 4289595
Strand: Direct
Name: 146301336
Synonym: Fjoh_3594
Alternate gene names: NA
Gene position: 4288639-4289595 (Clockwise)
Preceding gene: 146301326
Following gene: 146301337
Centisome position: 70.34
GC content: 27.38
Gene sequence:
>957_bases ATGAATTATGCAAACCACAATCTTCGAACTAACTTACAAGAATGGAAAAATCGATTATACAGATCCACTTATGAGCAATT TGGATTTCAATTAAAATATATTATAAGCAATTTTGACACTAATCTTCAAATTCACGCATTGATAAATGACTCAATAAAAG AGTATGTTTTTTCACAGGAAGAATTTAATAGCAGAACTAGTTCATATCGATCTCCTGAACTAATTTTCGAAAATGAAACT CATCAGTCTGCATACTGTTATCAGTTTTTAAAATACTTTATTGAAAAAAGTGGAAATTACAATTTACATAATAATACATT TTTTAGAGGTCGTGATTTTGAAGAGACAAAAACTAAAATAATAGAAGAATATATTTCTCCTATTCTTTACTATTTACACG ATAAACTTGAAAAGTTAAATTCAACTATCTACCTTCTAGAAAAATATAAAAAAAGAACAGAATGGTTTACGCAAAATAGC ATTTTATCAGCTTACAAAACCGCAACAAAAAATTATGAACAAATACTTGAAGATGATTTAAGATTATTTCTATTTGATCA AGGTATTGATTATCCCTTTTCTACTCCGACATCTGCTTCGGGTCGCGCCGATGTAATTGGTGAAATTGAAACAGACGATC CTTTAATTATTGAAATTAAAATATTTGATAGAACCAAAAAATATGGTAAGGACCGAATTAAAGATGGTTTCTCTCAAATT ATAAAATACACTAACGACTATAATAAAGATGTTGGTTTTTTGATAATATATAATATGGAGGACGTTGAAATTAATTTTAA GTTCTCTGAACCAACTAAAGTTTTTCCACCATCATTTCAATTCAATAATAAAACTTATTATTTTATTGTAATAAACTGTG GATTTACGAACTCTGCTAGTAAATCTGGCACAACTCAAGAAATTGAAATAACCGAATCTGAATTGACTAAAAAATAA
Upstream 100 bases:
>100_bases AAAGAAAAAGCGCTGTAAACATTAAGTTTACAGCGCTTTAGCACTTATTGTTAACTGATGTTAATCAGTTATTATTTGAC TTATTTAAAAACTTTGGTAA
Downstream 100 bases:
>100_bases CTACCACAAACAATTTTACGACGGATTTGGGCAAGAGACTTACCGGAAAAATGGTTTTGTATTTGGATAATTTGGCAAAT CCGAGGAATGGGGCTTGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MNYANHNLRTNLQEWKNRLYRSTYEQFGFQLKYIISNFDTNLQIHALINDSIKEYVFSQEEFNSRTSSYRSPELIFENET HQSAYCYQFLKYFIEKSGNYNLHNNTFFRGRDFEETKTKIIEEYISPILYYLHDKLEKLNSTIYLLEKYKKRTEWFTQNS ILSAYKTATKNYEQILEDDLRLFLFDQGIDYPFSTPTSASGRADVIGEIETDDPLIIEIKIFDRTKKYGKDRIKDGFSQI IKYTNDYNKDVGFLIIYNMEDVEINFKFSEPTKVFPPSFQFNNKTYYFIVINCGFTNSASKSGTTQEIEITESELTKK
Sequences:
>Translated_318_residues MNYANHNLRTNLQEWKNRLYRSTYEQFGFQLKYIISNFDTNLQIHALINDSIKEYVFSQEEFNSRTSSYRSPELIFENET HQSAYCYQFLKYFIEKSGNYNLHNNTFFRGRDFEETKTKIIEEYISPILYYLHDKLEKLNSTIYLLEKYKKRTEWFTQNS ILSAYKTATKNYEQILEDDLRLFLFDQGIDYPFSTPTSASGRADVIGEIETDDPLIIEIKIFDRTKKYGKDRIKDGFSQI IKYTNDYNKDVGFLIIYNMEDVEINFKFSEPTKVFPPSFQFNNKTYYFIVINCGFTNSASKSGTTQEIEITESELTKK >Mature_318_residues MNYANHNLRTNLQEWKNRLYRSTYEQFGFQLKYIISNFDTNLQIHALINDSIKEYVFSQEEFNSRTSSYRSPELIFENET HQSAYCYQFLKYFIEKSGNYNLHNNTFFRGRDFEETKTKIIEEYISPILYYLHDKLEKLNSTIYLLEKYKKRTEWFTQNS ILSAYKTATKNYEQILEDDLRLFLFDQGIDYPFSTPTSASGRADVIGEIETDDPLIIEIKIFDRTKKYGKDRIKDGFSQI IKYTNDYNKDVGFLIIYNMEDVEINFKFSEPTKVFPPSFQFNNKTYYFIVINCGFTNSASKSGTTQEIEITESELTKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37862; Mature: 37862
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYANHNLRTNLQEWKNRLYRSTYEQFGFQLKYIISNFDTNLQIHALINDSIKEYVFSQE CCCCCCCHHCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEEEHHHHHHHHCCHH EFNSRTSSYRSPELIFENETHQSAYCYQFLKYFIEKSGNYNLHNNTFFRGRDFEETKTKI HHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCHHHHHHH IEEYISPILYYLHDKLEKLNSTIYLLEKYKKRTEWFTQNSILSAYKTATKNYEQILEDDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RLFLFDQGIDYPFSTPTSASGRADVIGEIETDDPLIIEIKIFDRTKKYGKDRIKDGFSQI EEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCHHHHHHHHHHHHHHHH IKYTNDYNKDVGFLIIYNMEDVEINFKFSEPTKVFPPSFQFNNKTYYFIVINCGFTNSAS HHHHCCCCCCCCEEEEEECCEEEEEEEECCCCCCCCCCEEECCEEEEEEEEECCCCCCCC KSGTTQEIEITESELTKK CCCCCEEEEEEHHHHCCC >Mature Secondary Structure MNYANHNLRTNLQEWKNRLYRSTYEQFGFQLKYIISNFDTNLQIHALINDSIKEYVFSQE CCCCCCCHHCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEEEHHHHHHHHCCHH EFNSRTSSYRSPELIFENETHQSAYCYQFLKYFIEKSGNYNLHNNTFFRGRDFEETKTKI HHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCHHHHHHH IEEYISPILYYLHDKLEKLNSTIYLLEKYKKRTEWFTQNSILSAYKTATKNYEQILEDDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RLFLFDQGIDYPFSTPTSASGRADVIGEIETDDPLIIEIKIFDRTKKYGKDRIKDGFSQI EEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCHHHHHHHHHHHHHHHH IKYTNDYNKDVGFLIIYNMEDVEINFKFSEPTKVFPPSFQFNNKTYYFIVINCGFTNSAS HHHHCCCCCCCCEEEEEECCEEEEEEEECCCCCCCCCCEEECCEEEEEEEEECCCCCCCC KSGTTQEIEITESELTKK CCCCCEEEEEEHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA