| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301326
Identifier: 146301326
GI number: 146301326
Start: 4278124
End: 4280157
Strand: Direct
Name: 146301326
Synonym: Fjoh_3584
Alternate gene names: NA
Gene position: 4278124-4280157 (Clockwise)
Preceding gene: 146301325
Following gene: 146301336
Centisome position: 70.17
GC content: 34.51
Gene sequence:
>2034_bases ATGTTCAATAGACCAATAGACAGCAGTATCAGATCCGTAGTGGTTACCAGTCTGAAAGCCGCCAAAAAAAAAGCTGAAAA TCATTATAAAGGAAATATCACCAAAAAAATAAACGGACTTGATATTTTTGAAAGTCTGAAAATTATCGATCAGGAATTTA AGCTGGTCAAGCGAAAAGTCAAGAAATCAAAATATCCCTTCTATATTGAAAACTGTACTTCTGCCGAATGGCTGGTTTCA CAATTCGCAAGCCGTGCGTACCTTTTGAATATTGATGAAACTAAGGATTTAAAAAAAGCGCTGTTCCTTGGCATCTATAG AAATAAACTGCGCATCCAGAGAAATGAACTCTTGGCAGACAGTCCGGTCTATACTTACGAAAAATTCGTTAATGGGGAAA TTAACAGCTTCTTTCATCACTACCCGCAATATCGCAATTTAAGCGAGGAAGACTTTTACAAGATTATCAAATGGCAGTCG GAAAACGTAATTGCCATCATAAGCTATGAGAGCTCTATGCTTATAAAGAAAATCCAGCAGAAGTGCCTTGGCATTGATGA CCCTTTTTATTTTATAATGCTGCAGAAAACAGTTATAGACAATCTTATAAATTACACAGGGAATGACGCCAATGATCTTA AAATTTTACTTTCCCAATTGTATATTTTTGAAGACTTTAACCTCGATGAATTTAAAAATGATGCTTTACTGGAAAACTAC AGGTCTTTTGCAAATAATGAGTTCCACTGGAATAAAGCCGACTACAATTCCATTAAAAAGCTATCGGATGTTATGCAGGG CGGGCCGGAAAAAGTTTTCACCAATGAATTTTTAGTTTTCCATACTGTAGAAAAAATTGGTTTTTGGCTTGACTCGCTCG TAAATGAATCGCAGATACAGAAAACCTATATTCTTCCTGATTATGAAAAAGAACTGGAAAAGGTCCAGCGTGAAGCAGCT CAAGAAATAGAGAACTTAGCCGACGCAATGTATAATTATATCAACGATGAGGAGAACAGCGAAAAAGAAGTTAAAAATTA TCTCTTAAAATTATATGATGCCAATCGAATCAGGTATAATAAAATAAAAGAAAAAGATATTCTTCACATGCTTGCCGATG ACAGAAAGCATGTGCTGATAAACTATTTTACAACCAATGCCTTCTTTAGAAACAACATAGGAGAAACTGGAGAAAATCTT AGGGAATTGATTATTGTACGCGAACTTGCTTGGGAAATACTGGTCGCACATAATAACTTTTTTGACAACAAAAATATTTT CATCACATTGGACAATGACTTCAGTGACATTAACATGCTGATAAATAAGATGGTCCTAAATAAAAAACTTTATAAGGCCG GAAAAAAAGCACAAATGGACTTTTTTTCAAATTACGACAAATACGGTATGCCGATCGATTATCACTTTCAAAATGTGCAC GAAGAACTGCAAAAAGTATTTACCATTGCATTGAATAAACTTCAAAAAATATTGGATAACGCCGAGCCTAGTAAAAAAGT AATGTATCTCCAAAGCAGGATTAAAGAAATAAAGCAGAGGGAACTTTTATTCAAGCAGTACCAGGATGAAAGCGATTTTA AATATGCAGTGGATAAATATTCCGTTTTATTCAAAGAATTTTTAACCATCGAAGCTGACTTTTTGAAAGAAACCCTCAAT ACACAGCCAATAGCCTTTGAGCTGAAACAGCCAAAAACGTTAGAGATCAAGCCTGAATTTGACACCGTTTCAAATAAAAA AAATCAAAAATTCATCAAGCAGCTTCTCGAAGATTTAGGCCTGACCATAGACGGCAGAGCAAATATAAGTGAAAGGAAAA AAGGAGCAGTTAGAGGAATCGTTGAGGCATTAAAAGAAAGCAAAATTTTACCTGATAGAAGCCTTGAAGTTTTATGTAAA ATTATCGCCGATGAAATAGGTCTGCAAATAAATTCAAAACTAGACATATCAAACATATCCGAACAGTATAAAGAAGAGGC AGAAAAATACATTTCTGAAAATTACACACGATAA
Upstream 100 bases:
>100_bases ATAATAAATATCTTTTCATAAGGCCGCATTGCAAAAATTGCACTAAAATAAATCAGCTTCACTGCAAATGTAAAGACATA AAATTTAAAAGACTTTAAGA
Downstream 100 bases:
>100_bases TTCCAATTCCAGATATTCTCATCTATAAGGTTTTATAAGGTCAGCCTTATAACGTTGTATCATCTTCTAAATATTTGCAA TGTCTAACAAAGTAAATATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 677; Mature: 677
Protein sequence:
>677_residues MFNRPIDSSIRSVVVTSLKAAKKKAENHYKGNITKKINGLDIFESLKIIDQEFKLVKRKVKKSKYPFYIENCTSAEWLVS QFASRAYLLNIDETKDLKKALFLGIYRNKLRIQRNELLADSPVYTYEKFVNGEINSFFHHYPQYRNLSEEDFYKIIKWQS ENVIAIISYESSMLIKKIQQKCLGIDDPFYFIMLQKTVIDNLINYTGNDANDLKILLSQLYIFEDFNLDEFKNDALLENY RSFANNEFHWNKADYNSIKKLSDVMQGGPEKVFTNEFLVFHTVEKIGFWLDSLVNESQIQKTYILPDYEKELEKVQREAA QEIENLADAMYNYINDEENSEKEVKNYLLKLYDANRIRYNKIKEKDILHMLADDRKHVLINYFTTNAFFRNNIGETGENL RELIIVRELAWEILVAHNNFFDNKNIFITLDNDFSDINMLINKMVLNKKLYKAGKKAQMDFFSNYDKYGMPIDYHFQNVH EELQKVFTIALNKLQKILDNAEPSKKVMYLQSRIKEIKQRELLFKQYQDESDFKYAVDKYSVLFKEFLTIEADFLKETLN TQPIAFELKQPKTLEIKPEFDTVSNKKNQKFIKQLLEDLGLTIDGRANISERKKGAVRGIVEALKESKILPDRSLEVLCK IIADEIGLQINSKLDISNISEQYKEEAEKYISENYTR
Sequences:
>Translated_677_residues MFNRPIDSSIRSVVVTSLKAAKKKAENHYKGNITKKINGLDIFESLKIIDQEFKLVKRKVKKSKYPFYIENCTSAEWLVS QFASRAYLLNIDETKDLKKALFLGIYRNKLRIQRNELLADSPVYTYEKFVNGEINSFFHHYPQYRNLSEEDFYKIIKWQS ENVIAIISYESSMLIKKIQQKCLGIDDPFYFIMLQKTVIDNLINYTGNDANDLKILLSQLYIFEDFNLDEFKNDALLENY RSFANNEFHWNKADYNSIKKLSDVMQGGPEKVFTNEFLVFHTVEKIGFWLDSLVNESQIQKTYILPDYEKELEKVQREAA QEIENLADAMYNYINDEENSEKEVKNYLLKLYDANRIRYNKIKEKDILHMLADDRKHVLINYFTTNAFFRNNIGETGENL RELIIVRELAWEILVAHNNFFDNKNIFITLDNDFSDINMLINKMVLNKKLYKAGKKAQMDFFSNYDKYGMPIDYHFQNVH EELQKVFTIALNKLQKILDNAEPSKKVMYLQSRIKEIKQRELLFKQYQDESDFKYAVDKYSVLFKEFLTIEADFLKETLN TQPIAFELKQPKTLEIKPEFDTVSNKKNQKFIKQLLEDLGLTIDGRANISERKKGAVRGIVEALKESKILPDRSLEVLCK IIADEIGLQINSKLDISNISEQYKEEAEKYISENYTR >Mature_677_residues MFNRPIDSSIRSVVVTSLKAAKKKAENHYKGNITKKINGLDIFESLKIIDQEFKLVKRKVKKSKYPFYIENCTSAEWLVS QFASRAYLLNIDETKDLKKALFLGIYRNKLRIQRNELLADSPVYTYEKFVNGEINSFFHHYPQYRNLSEEDFYKIIKWQS ENVIAIISYESSMLIKKIQQKCLGIDDPFYFIMLQKTVIDNLINYTGNDANDLKILLSQLYIFEDFNLDEFKNDALLENY RSFANNEFHWNKADYNSIKKLSDVMQGGPEKVFTNEFLVFHTVEKIGFWLDSLVNESQIQKTYILPDYEKELEKVQREAA QEIENLADAMYNYINDEENSEKEVKNYLLKLYDANRIRYNKIKEKDILHMLADDRKHVLINYFTTNAFFRNNIGETGENL RELIIVRELAWEILVAHNNFFDNKNIFITLDNDFSDINMLINKMVLNKKLYKAGKKAQMDFFSNYDKYGMPIDYHFQNVH EELQKVFTIALNKLQKILDNAEPSKKVMYLQSRIKEIKQRELLFKQYQDESDFKYAVDKYSVLFKEFLTIEADFLKETLN TQPIAFELKQPKTLEIKPEFDTVSNKKNQKFIKQLLEDLGLTIDGRANISERKKGAVRGIVEALKESKILPDRSLEVLCK IIADEIGLQINSKLDISNISEQYKEEAEKYISENYTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79870; Mature: 79870
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNRPIDSSIRSVVVTSLKAAKKKAENHYKGNITKKINGLDIFESLKIIDQEFKLVKRKV CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHH KKSKYPFYIENCTSAEWLVSQFASRAYLLNIDETKDLKKALFLGIYRNKLRIQRNELLAD HHCCCCEEEECCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCC SPVYTYEKFVNGEINSFFHHYPQYRNLSEEDFYKIIKWQSENVIAIISYESSMLIKKIQQ CCCHHHHHHHCCCHHHHHHHCHHHCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHH KCLGIDDPFYFIMLQKTVIDNLINYTGNDANDLKILLSQLYIFEDFNLDEFKNDALLENY HHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHH RSFANNEFHWNKADYNSIKKLSDVMQGGPEKVFTNEFLVFHTVEKIGFWLDSLVNESQIQ HHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCHHHHH KTYILPDYEKELEKVQREAAQEIENLADAMYNYINDEENSEKEVKNYLLKLYDANRIRYN HEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHH KIKEKDILHMLADDRKHVLINYFTTNAFFRNNIGETGENLRELIIVRELAWEILVAHNNF HHHHHHHHHHHHCCCCEEEEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC FDNKNIFITLDNDFSDINMLINKMVLNKKLYKAGKKAQMDFFSNYDKYGMPIDYHFQNVH CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHH EELQKVFTIALNKLQKILDNAEPSKKVMYLQSRIKEIKQRELLFKQYQDESDFKYAVDKY HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH SVLFKEFLTIEADFLKETLNTQPIAFELKQPKTLEIKPEFDTVSNKKNQKFIKQLLEDLG HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHCC LTIDGRANISERKKGAVRGIVEALKESKILPDRSLEVLCKIIADEIGLQINSKLDISNIS CEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEECCCCCHHHHH EQYKEEAEKYISENYTR HHHHHHHHHHHHCCCCC >Mature Secondary Structure MFNRPIDSSIRSVVVTSLKAAKKKAENHYKGNITKKINGLDIFESLKIIDQEFKLVKRKV CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHH KKSKYPFYIENCTSAEWLVSQFASRAYLLNIDETKDLKKALFLGIYRNKLRIQRNELLAD HHCCCCEEEECCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCC SPVYTYEKFVNGEINSFFHHYPQYRNLSEEDFYKIIKWQSENVIAIISYESSMLIKKIQQ CCCHHHHHHHCCCHHHHHHHCHHHCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHH KCLGIDDPFYFIMLQKTVIDNLINYTGNDANDLKILLSQLYIFEDFNLDEFKNDALLENY HHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHH RSFANNEFHWNKADYNSIKKLSDVMQGGPEKVFTNEFLVFHTVEKIGFWLDSLVNESQIQ HHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCHHHHH KTYILPDYEKELEKVQREAAQEIENLADAMYNYINDEENSEKEVKNYLLKLYDANRIRYN HEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHH KIKEKDILHMLADDRKHVLINYFTTNAFFRNNIGETGENLRELIIVRELAWEILVAHNNF HHHHHHHHHHHHCCCCEEEEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC FDNKNIFITLDNDFSDINMLINKMVLNKKLYKAGKKAQMDFFSNYDKYGMPIDYHFQNVH CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHH EELQKVFTIALNKLQKILDNAEPSKKVMYLQSRIKEIKQRELLFKQYQDESDFKYAVDKY HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH SVLFKEFLTIEADFLKETLNTQPIAFELKQPKTLEIKPEFDTVSNKKNQKFIKQLLEDLG HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHCC LTIDGRANISERKKGAVRGIVEALKESKILPDRSLEVLCKIIADEIGLQINSKLDISNIS CEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEECCCCCHHHHH EQYKEEAEKYISENYTR HHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA