| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300970
Identifier: 146300970
GI number: 146300970
Start: 3841853
End: 3842659
Strand: Reverse
Name: 146300970
Synonym: Fjoh_3225
Alternate gene names: NA
Gene position: 3842659-3841853 (Counterclockwise)
Preceding gene: 146300971
Following gene: 146300961
Centisome position: 63.03
GC content: 34.82
Gene sequence:
>807_bases ATGGACAAAATAACATTTACACGTCTGGAACTTTATAATTTAGTTTGGAAATTCCCAATTATCCAAATTGCGAAACATTA TGAGATTTCGAGCATGGGAATAAAAAATGCCTGCGAAAAAATGCAGATTCCCCTGCCGGGAAGTAAACATTGGATCAGGC TGAATTACGAACGAAAAAGTATTCCGAAACTTTCAGGAGATTATAAAGGAAACAGTCAGATTAGTATTTTAAGGAAAATG TATGAAAGTCCGCTTAGAAAAACAGCGAGATCAACTCCTTTAATTGCCTTAATCGAAAGTATTGAATCTGATTCAAAAGC GCCTTCAAAAGTTCTTGAATTCTTAAACAATCCCACTGGTATTATCAGGAAAACACAAAATTATTGGAATCATGCCGAAT TGAACAGAAACGTTTCTGAAACTCCGGAAGAAATTATCCAGTTAAGCGTAGATCAAAAAAATACAAATAGGGCTTTACGA TTTATGGATGCCCTGATTAAATTGTTAGAATACAGAGGACATCAATTTAAAAAAAGCAATGACAACCGCGATATTATTTT GATGCATAAAGAAATCGAAATTGATATTCACCTGCGCGAAGCCTTAAAAAGGATTCCTCCCAAAACCAATAAAGACTCAG CCGACTATATTTTTACAGGCGAATTTATTCTGCAAATCAAAAAAGGATCTTATAAAAAGGAGTGGAGAGACGGCAAATTA CCTTTAGAAAACAATCTTACCGCCATCGTCGCCAAACTTGAATTAATCGCCGTAGAAGAAAAACAATGGAAAGAAGCTTC TTTTTGA
Upstream 100 bases:
>100_bases GAGTAGAGTAGTGCTGCATTTCTAAATCCATCATCTTTATAAATGTAAAGATGGTGGATTTTGTATATTATTTTGATGGT TTAAACTGTCTTGTTTTAAT
Downstream 100 bases:
>100_bases TGATTGAAATTTGGTGGAAATAAAAACCTTACCGCTTTAAGGGAAGTTTTTAATTTTCAGAATTTTAAAACTTATAAATC TATTTTAAAAACAGCACCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MDKITFTRLELYNLVWKFPIIQIAKHYEISSMGIKNACEKMQIPLPGSKHWIRLNYERKSIPKLSGDYKGNSQISILRKM YESPLRKTARSTPLIALIESIESDSKAPSKVLEFLNNPTGIIRKTQNYWNHAELNRNVSETPEEIIQLSVDQKNTNRALR FMDALIKLLEYRGHQFKKSNDNRDIILMHKEIEIDIHLREALKRIPPKTNKDSADYIFTGEFILQIKKGSYKKEWRDGKL PLENNLTAIVAKLELIAVEEKQWKEASF
Sequences:
>Translated_268_residues MDKITFTRLELYNLVWKFPIIQIAKHYEISSMGIKNACEKMQIPLPGSKHWIRLNYERKSIPKLSGDYKGNSQISILRKM YESPLRKTARSTPLIALIESIESDSKAPSKVLEFLNNPTGIIRKTQNYWNHAELNRNVSETPEEIIQLSVDQKNTNRALR FMDALIKLLEYRGHQFKKSNDNRDIILMHKEIEIDIHLREALKRIPPKTNKDSADYIFTGEFILQIKKGSYKKEWRDGKL PLENNLTAIVAKLELIAVEEKQWKEASF >Mature_268_residues MDKITFTRLELYNLVWKFPIIQIAKHYEISSMGIKNACEKMQIPLPGSKHWIRLNYERKSIPKLSGDYKGNSQISILRKM YESPLRKTARSTPLIALIESIESDSKAPSKVLEFLNNPTGIIRKTQNYWNHAELNRNVSETPEEIIQLSVDQKNTNRALR FMDALIKLLEYRGHQFKKSNDNRDIILMHKEIEIDIHLREALKRIPPKTNKDSADYIFTGEFILQIKKGSYKKEWRDGKL PLENNLTAIVAKLELIAVEEKQWKEASF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31311; Mature: 31311
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKITFTRLELYNLVWKFPIIQIAKHYEISSMGIKNACEKMQIPLPGSKHWIRLNYERKS CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHCCCCCCCCCCEEEEEECHHC IPKLSGDYKGNSQISILRKMYESPLRKTARSTPLIALIESIESDSKAPSKVLEFLNNPTG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHCCCHH IIRKTQNYWNHAELNRNVSETPEEIIQLSVDQKNTNRALRFMDALIKLLEYRGHQFKKSN EEECCHHHCCHHHHCCCCCCCHHHHHEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC DNRDIILMHKEIEIDIHLREALKRIPPKTNKDSADYIFTGEFILQIKKGSYKKEWRDGKL CCCCEEEEEEEEEEEEEHHHHHHHCCCCCCCCCCCEEEECEEEEEECCCCCCHHCCCCCC PLENNLTAIVAKLELIAVEEKQWKEASF CCCCCHHHHHHHHHHEEECHHHHHCCCC >Mature Secondary Structure MDKITFTRLELYNLVWKFPIIQIAKHYEISSMGIKNACEKMQIPLPGSKHWIRLNYERKS CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHCCCCCCCCCCEEEEEECHHC IPKLSGDYKGNSQISILRKMYESPLRKTARSTPLIALIESIESDSKAPSKVLEFLNNPTG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHCCCHH IIRKTQNYWNHAELNRNVSETPEEIIQLSVDQKNTNRALRFMDALIKLLEYRGHQFKKSN EEECCHHHCCHHHHCCCCCCCHHHHHEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC DNRDIILMHKEIEIDIHLREALKRIPPKTNKDSADYIFTGEFILQIKKGSYKKEWRDGKL CCCCEEEEEEEEEEEEEHHHHHHHCCCCCCCCCCCEEEECEEEEEECCCCCCHHCCCCCC PLENNLTAIVAKLELIAVEEKQWKEASF CCCCCHHHHHHHHHHEEECHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA