| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300961
Identifier: 146300961
GI number: 146300961
Start: 3832957
End: 3833334
Strand: Reverse
Name: 146300961
Synonym: Fjoh_3216
Alternate gene names: NA
Gene position: 3833334-3832957 (Counterclockwise)
Preceding gene: 146300970
Following gene: 146300960
Centisome position: 62.87
GC content: 31.75
Gene sequence:
>378_bases ATGTCTGATTTTTTAAAACAATTTGGAGAAGACCTTAAAAAAAATATTCCAGGTTTCATCGCAGTTTCTGTAGCAGAAAT TCAAAGCGGAATGTCGTATTTTTCACTTTCAACTGTAAGTGATTTTGATCCGGAACTAGCTTCGGCTTATAACCTTGAAG TAGTTAAGGCAAAAATGAATGCTATTAAGGCTTTAAAAATAACCGATCAGGCTATTGATAATATCATGATTACGCTTACA TCTCAAATTCATATTCTTGACGTTTCAGACAATGGTGATTATTTTATCTACCTGGCTGTAGATTCTACAAAAGCAAATCT TGGAATGACAAAATCGATTTTGAATAAATACAAAAAAGAGATTACCCAAAAACTGTAA
Upstream 100 bases:
>100_bases TAGGTACACATTGCGGATAATTAAATAAAATGAGATCTATAATTTTGTGTAAAATCCAAGAGAAAAAGGATTCTAGAACC CTAAATAAAACTAAAAACAT
Downstream 100 bases:
>100_bases TTGCCTAATTTATAATTTTAAAAGAGGATTTTCTATTTTGAATTTCCTCTTTTTTATTTTATACCATTTTTTGTCTGCGA AGATTGATTTATATTTAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MSDFLKQFGEDLKKNIPGFIAVSVAEIQSGMSYFSLSTVSDFDPELASAYNLEVVKAKMNAIKALKITDQAIDNIMITLT SQIHILDVSDNGDYFIYLAVDSTKANLGMTKSILNKYKKEITQKL
Sequences:
>Translated_125_residues MSDFLKQFGEDLKKNIPGFIAVSVAEIQSGMSYFSLSTVSDFDPELASAYNLEVVKAKMNAIKALKITDQAIDNIMITLT SQIHILDVSDNGDYFIYLAVDSTKANLGMTKSILNKYKKEITQKL >Mature_124_residues SDFLKQFGEDLKKNIPGFIAVSVAEIQSGMSYFSLSTVSDFDPELASAYNLEVVKAKMNAIKALKITDQAIDNIMITLTS QIHILDVSDNGDYFIYLAVDSTKANLGMTKSILNKYKKEITQKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13878; Mature: 13747
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDFLKQFGEDLKKNIPGFIAVSVAEIQSGMSYFSLSTVSDFDPELASAYNLEVVKAKMN CCHHHHHHHHHHHHCCCCEEEEEHHHHHCCCHHEEECCCCCCCHHHHHHHHHHHHHHHHH AIKALKITDQAIDNIMITLTSQIHILDVSDNGDYFIYLAVDSTKANLGMTKSILNKYKKE HHHHHHHHHHHHHHEEEEEECEEEEEEECCCCCEEEEEEEECCCCCCCHHHHHHHHHHHH ITQKL HHHCC >Mature Secondary Structure SDFLKQFGEDLKKNIPGFIAVSVAEIQSGMSYFSLSTVSDFDPELASAYNLEVVKAKMN CHHHHHHHHHHHHCCCCEEEEEHHHHHCCCHHEEECCCCCCCHHHHHHHHHHHHHHHHH AIKALKITDQAIDNIMITLTSQIHILDVSDNGDYFIYLAVDSTKANLGMTKSILNKYKKE HHHHHHHHHHHHHHEEEEEECEEEEEEECCCCCEEEEEEEECCCCCCCHHHHHHHHHHHH ITQKL HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA