| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300960
Identifier: 146300960
GI number: 146300960
Start: 3832371
End: 3832838
Strand: Reverse
Name: 146300960
Synonym: Fjoh_3215
Alternate gene names: NA
Gene position: 3832838-3832371 (Counterclockwise)
Preceding gene: 146300961
Following gene: 146300959
Centisome position: 62.87
GC content: 36.54
Gene sequence:
>468_bases ATGGAATTACGGAAGTACTTCGAAAAATACCACGACGAAGAAACCTGCATTGAAGAATTAAGAGACAAACGGCTGCAAAA TGGTTTGTCTTGCAGGAAATGCTCACATAATCAGCATTCGTTTCGAAGAGTTGATTTAAAATTTCAATGCAAAAAATGCG GCAGCAGAATGAGTCTGCGGTCGGGAACCGTGATGGAAAATTCAAATCTGCCTATAAAATACTGGATGATCTGTATTGAA TTGATGACGCTTTCTAAAAGAAAATTTTCCATATTGCAGATTCAGTATTTATTAGGTCACAAACGCTACGAACCTATTTG GTTAATGGTGCAGAAAATACGTCTGGTAATGCAAAAGAGAGACGAAAAATATACTTTGCGTGCTTATTCTGAATTCGATT CTGAATTTCTTAAGGAGATCGACAAACTGACCTACAAAAAGAAAACTAAAGATACCAGCGAAAACTGA
Upstream 100 bases:
>100_bases TAAAAGAGGATTTTCTATTTTGAATTTCCTCTTTTTTATTTTATACCATTTTTTGTCTGCGAAGATTGATTTATATTTAG TCCGTAAACAAATTTAGTAA
Downstream 100 bases:
>100_bases CTGGGAAATATTAATTACATCGAAAACTTTGTTTCATGTTATAATCTGCAACCTGTAAATTTCAATACATACTATCTGCA GCTTTTATCTTTGTTACACT
Product: hypothetical protein
Products: NA
Alternate protein names: ISXo2 Transposase; ISSpo3 Transposase; ISXo2 Transposase; ISSod11 Transposase; ISXo5 Transposase
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MELRKYFEKYHDEETCIEELRDKRLQNGLSCRKCSHNQHSFRRVDLKFQCKKCGSRMSLRSGTVMENSNLPIKYWMICIE LMTLSKRKFSILQIQYLLGHKRYEPIWLMVQKIRLVMQKRDEKYTLRAYSEFDSEFLKEIDKLTYKKKTKDTSEN
Sequences:
>Translated_155_residues MELRKYFEKYHDEETCIEELRDKRLQNGLSCRKCSHNQHSFRRVDLKFQCKKCGSRMSLRSGTVMENSNLPIKYWMICIE LMTLSKRKFSILQIQYLLGHKRYEPIWLMVQKIRLVMQKRDEKYTLRAYSEFDSEFLKEIDKLTYKKKTKDTSEN >Mature_155_residues MELRKYFEKYHDEETCIEELRDKRLQNGLSCRKCSHNQHSFRRVDLKFQCKKCGSRMSLRSGTVMENSNLPIKYWMICIE LMTLSKRKFSILQIQYLLGHKRYEPIWLMVQKIRLVMQKRDEKYTLRAYSEFDSEFLKEIDKLTYKKKTKDTSEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18924; Mature: 18924
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 8.4 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 8.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELRKYFEKYHDEETCIEELRDKRLQNGLSCRKCSHNQHSFRRVDLKFQCKKCGSRMSLR CCHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCHHHHHHHCCCCCCCC SGTVMENSNLPIKYWMICIELMTLSKRKFSILQIQYLLGHKRYEPIWLMVQKIRLVMQKR CCCEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC DEKYTLRAYSEFDSEFLKEIDKLTYKKKTKDTSEN CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MELRKYFEKYHDEETCIEELRDKRLQNGLSCRKCSHNQHSFRRVDLKFQCKKCGSRMSLR CCHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCHHHHHHHCCCCCCCC SGTVMENSNLPIKYWMICIELMTLSKRKFSILQIQYLLGHKRYEPIWLMVQKIRLVMQKR CCCEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC DEKYTLRAYSEFDSEFLKEIDKLTYKKKTKDTSEN CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA