The gene/protein map for NC_009441 is currently unavailable.
Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is yusZ [H]

Identifier: 146300937

GI number: 146300937

Start: 3805056

End: 3805913

Strand: Reverse

Name: yusZ [H]

Synonym: Fjoh_3192

Alternate gene names: 146300937

Gene position: 3805913-3805056 (Counterclockwise)

Preceding gene: 146300938

Following gene: 146300936

Centisome position: 62.42

GC content: 39.39

Gene sequence:

>858_bases
ATGTCAAAAACAATTTTCATTACAGGAACAAGTACAGGCTTTGGAAAATTAACAGCTTTAACATTAGCAAACGCTGGTCA
TTCAGTAATTGCAGGAATGCGCAACACAAATGATAAAAATGCCGCAGCCGCAAAAGAACTGGGAGCAGTAGAAAACATTG
AAGTAGTAGATATCGATGTTACTGATGATGCATCAGTTAACAAAGCCATCGAAAAAGTAATCACTAAATACGGCAAAATT
GATGTATTGATAAACAATGCAGCAGTAAGCGGTTTTGGTCTGCTTGAAGGCTACTCAATCGATCAGGTTCGCAAAATGTT
CGATGTAAACGTTTACAGCGTGCTTCGTATGTATCAGGCGGTGCTTCCTTCTATGAGAAAAGAAAGAAACGGACTTGTCA
TTAATATTACAACCGGAGCAAGCGGACACACACTTCCTTTTATGGTTCCGTATATCGCATCAAAACTTGTAGTAGAAAGT
TTTACAGAAGGATTGCAAGATGAACTTGCTGATTACGGAATTGAAAATGTAAGCATCCAGCCTGGAGTTTATCCAACAGA
AATGAATAACGGATCGAAAGCGGGTATTTATGCTGATAAAACAGAAATTATAGAACAATACGGCGAAGCTGCAACAGAAA
AATTCAACGCATTGGGCACAGCATTATTTGGCAAAATGGCACAGTTCGATATGAATCCGCAGACTATTGCCGATGGTATT
CTGGAGTTGGTAAGCATGAAAAAAGGAGAGAGACCGCTTCGTTTTCCGCTTGATGCCATTGCTCAGGGAACTGATAAAGA
ATTTATAGAAGCCCGTGCTGCTATTAAAGCAAAATGGGTAGCTGCTTACACTAATTAA

Upstream 100 bases:

>100_bases
GTTTTTACTTATTTCTAATCAATGTACAGGTTTTGCATTCGTCGCAACTTTGTAATGTTCAAAAGAAACAAACATTATAA
ACATTTAAAAATTAGAAATC

Downstream 100 bases:

>100_bases
TTTTCCTTTTAAACACATTTAATAATTACAACACATATAAATAATCATGAAAACAATTCATAAAAAATCAAATAAAAAAG
TACAGACTTCAGCAGCTGCA

Product: short-chain dehydrogenase/reductase SDR

Products: (3R)-hydroxyacyl-[acyl-carrier-protein]; NADP; NADPH; Proton; beta-ketoacyl-ACP [C]

Alternate protein names: ORFA [H]

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MSKTIFITGTSTGFGKLTALTLANAGHSVIAGMRNTNDKNAAAAKELGAVENIEVVDIDVTDDASVNKAIEKVITKYGKI
DVLINNAAVSGFGLLEGYSIDQVRKMFDVNVYSVLRMYQAVLPSMRKERNGLVINITTGASGHTLPFMVPYIASKLVVES
FTEGLQDELADYGIENVSIQPGVYPTEMNNGSKAGIYADKTEIIEQYGEAATEKFNALGTALFGKMAQFDMNPQTIADGI
LELVSMKKGERPLRFPLDAIAQGTDKEFIEARAAIKAKWVAAYTN

Sequences:

>Translated_285_residues
MSKTIFITGTSTGFGKLTALTLANAGHSVIAGMRNTNDKNAAAAKELGAVENIEVVDIDVTDDASVNKAIEKVITKYGKI
DVLINNAAVSGFGLLEGYSIDQVRKMFDVNVYSVLRMYQAVLPSMRKERNGLVINITTGASGHTLPFMVPYIASKLVVES
FTEGLQDELADYGIENVSIQPGVYPTEMNNGSKAGIYADKTEIIEQYGEAATEKFNALGTALFGKMAQFDMNPQTIADGI
LELVSMKKGERPLRFPLDAIAQGTDKEFIEARAAIKAKWVAAYTN
>Mature_284_residues
SKTIFITGTSTGFGKLTALTLANAGHSVIAGMRNTNDKNAAAAKELGAVENIEVVDIDVTDDASVNKAIEKVITKYGKID
VLINNAAVSGFGLLEGYSIDQVRKMFDVNVYSVLRMYQAVLPSMRKERNGLVINITTGASGHTLPFMVPYIASKLVVESF
TEGLQDELADYGIENVSIQPGVYPTEMNNGSKAGIYADKTEIIEQYGEAATEKFNALGTALFGKMAQFDMNPQTIADGIL
ELVSMKKGERPLRFPLDAIAQGTDKEFIEARAAIKAKWVAAYTN

Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI7657478, Length=266, Percent_Identity=30.0751879699248, Blast_Score=102, Evalue=3e-22,
Organism=Homo sapiens, GI7706318, Length=196, Percent_Identity=29.5918367346939, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI20149619, Length=228, Percent_Identity=27.6315789473684, Blast_Score=91, Evalue=9e-19,
Organism=Homo sapiens, GI223718074, Length=191, Percent_Identity=35.6020942408377, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI40548397, Length=221, Percent_Identity=29.8642533936652, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI214010158, Length=221, Percent_Identity=29.8642533936652, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI214010156, Length=221, Percent_Identity=29.8642533936652, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI22758144, Length=221, Percent_Identity=29.8642533936652, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI142976729, Length=189, Percent_Identity=30.6878306878307, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI44680136, Length=220, Percent_Identity=26.3636363636364, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI44680133, Length=220, Percent_Identity=26.3636363636364, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI17738292, Length=220, Percent_Identity=26.3636363636364, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI19743808, Length=195, Percent_Identity=29.2307692307692, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI157739938, Length=261, Percent_Identity=24.5210727969349, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI4504503, Length=209, Percent_Identity=27.2727272727273, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI119392083, Length=253, Percent_Identity=25.6916996047431, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI210032110, Length=171, Percent_Identity=24.5614035087719, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI150247226, Length=222, Percent_Identity=31.0810810810811, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI109715829, Length=191, Percent_Identity=29.8429319371728, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI22507405, Length=187, Percent_Identity=28.8770053475936, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI40807363, Length=198, Percent_Identity=28.2828282828283, Blast_Score=69, Evalue=7e-12,
Organism=Homo sapiens, GI7705855, Length=188, Percent_Identity=29.2553191489362, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI50726952, Length=285, Percent_Identity=28.4210526315789, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI4557649, Length=185, Percent_Identity=29.7297297297297, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI40254986, Length=141, Percent_Identity=29.0780141843972, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI225579078, Length=210, Percent_Identity=29.0476190476191, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI1787335, Length=205, Percent_Identity=32.1951219512195, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1788459, Length=243, Percent_Identity=27.9835390946502, Blast_Score=81, Evalue=9e-17,
Organism=Escherichia coli, GI1790717, Length=188, Percent_Identity=32.4468085106383, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1787820, Length=190, Percent_Identity=28.9473684210526, Blast_Score=78, Evalue=7e-16,
Organism=Escherichia coli, GI1786812, Length=243, Percent_Identity=27.5720164609054, Blast_Score=77, Evalue=9e-16,
Organism=Escherichia coli, GI87082100, Length=189, Percent_Identity=32.2751322751323, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1786701, Length=195, Percent_Identity=28.2051282051282, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87082160, Length=188, Percent_Identity=26.5957446808511, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787905, Length=146, Percent_Identity=31.5068493150685, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI2367365, Length=189, Percent_Identity=26.984126984127, Blast_Score=63, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17507613, Length=228, Percent_Identity=28.5087719298246, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI32563809, Length=228, Percent_Identity=28.5087719298246, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17557780, Length=228, Percent_Identity=28.5087719298246, Blast_Score=84, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI115534660, Length=293, Percent_Identity=24.9146757679181, Blast_Score=81, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI71994600, Length=191, Percent_Identity=29.3193717277487, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17560332, Length=214, Percent_Identity=31.3084112149533, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17538486, Length=207, Percent_Identity=30.9178743961353, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17563726, Length=193, Percent_Identity=31.0880829015544, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI71994604, Length=190, Percent_Identity=27.3684210526316, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71982365, Length=188, Percent_Identity=28.1914893617021, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17559104, Length=194, Percent_Identity=29.3814432989691, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17538480, Length=194, Percent_Identity=30.4123711340206, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17544670, Length=220, Percent_Identity=27.2727272727273, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI193210355, Length=242, Percent_Identity=25.6198347107438, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17562904, Length=197, Percent_Identity=27.9187817258883, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI72000259, Length=255, Percent_Identity=26.2745098039216, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI193204405, Length=234, Percent_Identity=28.2051282051282, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17536651, Length=219, Percent_Identity=26.9406392694064, Blast_Score=71, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17567345, Length=186, Percent_Identity=27.9569892473118, Blast_Score=71, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17562990, Length=193, Percent_Identity=29.0155440414508, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17560150, Length=193, Percent_Identity=28.4974093264249, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17508895, Length=196, Percent_Identity=25, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17562906, Length=236, Percent_Identity=27.9661016949153, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17551412, Length=192, Percent_Identity=28.6458333333333, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17536025, Length=188, Percent_Identity=28.7234042553192, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17560220, Length=195, Percent_Identity=29.7435897435897, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI115534694, Length=191, Percent_Identity=30.8900523560209, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17561402, Length=245, Percent_Identity=27.3469387755102, Blast_Score=65, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17565030, Length=194, Percent_Identity=29.3814432989691, Blast_Score=65, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17561272, Length=177, Percent_Identity=32.7683615819209, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17538182, Length=198, Percent_Identity=31.3131313131313, Blast_Score=64, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=223, Percent_Identity=28.6995515695067, Blast_Score=84, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6322227, Length=202, Percent_Identity=26.7326732673267, Blast_Score=70, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24651139, Length=229, Percent_Identity=25.764192139738, Blast_Score=91, Evalue=9e-19,
Organism=Drosophila melanogaster, GI21357041, Length=188, Percent_Identity=30.3191489361702, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24640442, Length=210, Percent_Identity=30.952380952381, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI28571526, Length=193, Percent_Identity=30.5699481865285, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI23397609, Length=240, Percent_Identity=28.75, Blast_Score=85, Evalue=6e-17,
Organism=Drosophila melanogaster, GI24644339, Length=189, Percent_Identity=28.042328042328, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI21358495, Length=197, Percent_Identity=26.9035532994924, Blast_Score=81, Evalue=9e-16,
Organism=Drosophila melanogaster, GI281364892, Length=191, Percent_Identity=28.2722513089005, Blast_Score=78, Evalue=5e-15,
Organism=Drosophila melanogaster, GI24640492, Length=196, Percent_Identity=27.5510204081633, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI116007236, Length=194, Percent_Identity=29.3814432989691, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI21357673, Length=215, Percent_Identity=25.5813953488372, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI161076933, Length=199, Percent_Identity=28.643216080402, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24584748, Length=199, Percent_Identity=28.643216080402, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24641232, Length=203, Percent_Identity=29.064039408867, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI21355319, Length=191, Percent_Identity=26.7015706806283, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24584752, Length=191, Percent_Identity=30.3664921465969, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24580925, Length=205, Percent_Identity=25.3658536585366, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24643142, Length=186, Percent_Identity=27.9569892473118, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI116007238, Length=176, Percent_Identity=28.9772727272727, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI17737361, Length=196, Percent_Identity=27.5510204081633, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.1.1.100 [C]

Molecular weight: Translated: 30779; Mature: 30647

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MSKTIFITGTSTGFGKLTALTLANAGHSVIAGMRNTNDKNAAAAKELGAVENIEVVDIDV
CCCEEEEEECCCCCCCEEEEEECCCCCHHHCCCCCCCCCHHHHHHHHCCCCCCEEEEEEC
TDDASVNKAIEKVITKYGKIDVLINNAAVSGFGLLEGYSIDQVRKMFDVNVYSVLRMYQA
CCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHCCCCHHHHHHHHCCCHHHHHHHHHH
VLPSMRKERNGLVINITTGASGHTLPFMVPYIASKLVVESFTEGLQDELADYGIENVSIQ
HHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEC
PGVYPTEMNNGSKAGIYADKTEIIEQYGEAATEKFNALGTALFGKMAQFDMNPQTIADGI
CCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LELVSMKKGERPLRFPLDAIAQGTDKEFIEARAAIKAKWVAAYTN
HHHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHEEEEEEECC
>Mature Secondary Structure 
SKTIFITGTSTGFGKLTALTLANAGHSVIAGMRNTNDKNAAAAKELGAVENIEVVDIDV
CCEEEEEECCCCCCCEEEEEECCCCCHHHCCCCCCCCCHHHHHHHHCCCCCCEEEEEEC
TDDASVNKAIEKVITKYGKIDVLINNAAVSGFGLLEGYSIDQVRKMFDVNVYSVLRMYQA
CCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHCCCCHHHHHHHHCCCHHHHHHHHHH
VLPSMRKERNGLVINITTGASGHTLPFMVPYIASKLVVESFTEGLQDELADYGIENVSIQ
HHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEC
PGVYPTEMNNGSKAGIYADKTEIIEQYGEAATEKFNALGTALFGKMAQFDMNPQTIADGI
CCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LELVSMKKGERPLRFPLDAIAQGTDKEFIEARAAIKAKWVAAYTN
HHHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NADPH [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Oxoacyl-[acyl-carrier-protein]; NADPH; D-3-hydroxy-acyl-ACP; NADP [C]

Specific reaction: Oxoacyl-[acyl-carrier-protein] + NADPH = (3R)-hydroxyacyl-[acyl-carrier-protein] + NADP+ D-3-hydroxy-acyl-ACP + NADP = NADPH + Proton + beta-ketoacyl-ACP [C]

General reaction: Redox reaction [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353931; 9384377; 8396117 [H]