| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is 146300928
Identifier: 146300928
GI number: 146300928
Start: 3790667
End: 3791221
Strand: Direct
Name: 146300928
Synonym: Fjoh_3183
Alternate gene names: NA
Gene position: 3790667-3791221 (Clockwise)
Preceding gene: 146300925
Following gene: 146300931
Centisome position: 62.17
GC content: 34.41
Gene sequence:
>555_bases ATGATGCAGACTGAAAATTTAGAAATCCCAAAAATCAATTTTGATGCAGATGGAAAATTAATAATTACCGCCTCTCCCAC TTCATCTAAAAATGATTTTGATTTTTTTGAAGGAAAATGGAAACTCCGTAATAAAAAACTCAATTCCAGATTGTCTAATT GCACGGAATGGACAGAATTTGAATCGACACAGGAAATGTACAAAGTTCTAAATGGAATTGGCAATATCGATAATTTTCTT GCCACTTTTGACGGACAGCCATTTGAAGGGATGACAGTAAGATTGTTTAATCCGAAAAGCAGATTATGGAGCATTTATTG GGCAGATTCTAATGAAGGAAAATTAGATCCTCCGGTATTAGGTTCTTTTGAAAATAATGTAGGTCATTTTGTTACTAAAG ACATCTTTAATGGAAAAGATATTCTGGTAATTTTTCGCTGGGATGCAAGAGACAAAAATAATCCGGTATGGAGTCAGGCA TTTTCTGCAGACAATGGAAAATCCTGGGAATGGAACTGGTATATGTATATGTCAAAGTTTGAGCAGGAAGACTAA
Upstream 100 bases:
>100_bases CCTTATGCCGTCTTGATTCCATATTTCGATACAGCAATTAGCAGCGATTCAGCATAAATTATTACTTTTAAACCAATTAA CTAATAATCAAAGAACTAAA
Downstream 100 bases:
>100_bases ATTAAAGAACTGCACATATCATGTTTGTAAAATTGTAAAGCAGAAATTGAAATACTTATTCTACTTTTTTAATCATTTTG ATATAAAAAAATTTATCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MMQTENLEIPKINFDADGKLIITASPTSSKNDFDFFEGKWKLRNKKLNSRLSNCTEWTEFESTQEMYKVLNGIGNIDNFL ATFDGQPFEGMTVRLFNPKSRLWSIYWADSNEGKLDPPVLGSFENNVGHFVTKDIFNGKDILVIFRWDARDKNNPVWSQA FSADNGKSWEWNWYMYMSKFEQED
Sequences:
>Translated_184_residues MMQTENLEIPKINFDADGKLIITASPTSSKNDFDFFEGKWKLRNKKLNSRLSNCTEWTEFESTQEMYKVLNGIGNIDNFL ATFDGQPFEGMTVRLFNPKSRLWSIYWADSNEGKLDPPVLGSFENNVGHFVTKDIFNGKDILVIFRWDARDKNNPVWSQA FSADNGKSWEWNWYMYMSKFEQED >Mature_184_residues MMQTENLEIPKINFDADGKLIITASPTSSKNDFDFFEGKWKLRNKKLNSRLSNCTEWTEFESTQEMYKVLNGIGNIDNFL ATFDGQPFEGMTVRLFNPKSRLWSIYWADSNEGKLDPPVLGSFENNVGHFVTKDIFNGKDILVIFRWDARDKNNPVWSQA FSADNGKSWEWNWYMYMSKFEQED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21543; Mature: 21543
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQTENLEIPKINFDADGKLIITASPTSSKNDFDFFEGKWKLRNKKLNSRLSNCTEWTEF CCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCEEEECHHHHHHHHHCCHHHHHH ESTQEMYKVLNGIGNIDNFLATFDGQPFEGMTVRLFNPKSRLWSIYWADSNEGKLDPPVL HHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCC GSFENNVGHFVTKDIFNGKDILVIFRWDARDKNNPVWSQAFSADNGKSWEWNWYMYMSKF CCCCCCCCCEEEHHHCCCCEEEEEEEECCCCCCCCCHHHHCCCCCCCCEEEEEEEEEECC EQED CCCC >Mature Secondary Structure MMQTENLEIPKINFDADGKLIITASPTSSKNDFDFFEGKWKLRNKKLNSRLSNCTEWTEF CCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCEEEECHHHHHHHHHCCHHHHHH ESTQEMYKVLNGIGNIDNFLATFDGQPFEGMTVRLFNPKSRLWSIYWADSNEGKLDPPVL HHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCC GSFENNVGHFVTKDIFNGKDILVIFRWDARDKNNPVWSQAFSADNGKSWEWNWYMYMSKF CCCCCCCCCEEEHHHCCCCEEEEEEEECCCCCCCCCHHHHCCCCCCCCEEEEEEEEEECC EQED CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA