| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300931
Identifier: 146300931
GI number: 146300931
Start: 3796634
End: 3797422
Strand: Direct
Name: 146300931
Synonym: Fjoh_3186
Alternate gene names: NA
Gene position: 3796634-3797422 (Clockwise)
Preceding gene: 146300928
Following gene: 146300932
Centisome position: 62.27
GC content: 40.94
Gene sequence:
>789_bases ATGAAAAGAATCTTCAAATTAGCAAGTATGCTGTTTATTACAGCTTTAGTGTTTAACTCCTGCGAAAAGGAACAAGATCC AGATGCGTCACAAGCTCTAAACAAAGAAATTGCTGAAGCTGTAAAGGATGAAGCTCCAATTGTGAACAACGTATCTGAAA ACGCTTCTACGGCAAAAGGCAGTACCGGTGCCAGAACTATTACTTTGCAAACCAACACATTATCGTGTCCGGGCGGTTTA TGTACATCGTACGGCGTTTGGTCAACAGGCGTTTACACGGTTTGGTTTACAATGAAATTTAATAATGGATTTTATTGGAG CCGAGGCGGTAAATGCGGCTACGGTATATTAATTGGTGACCAGAATACGGGAGGCGATCCGGGATGGGATGGTAATGGCG GAAGTGCCAGATTTATGTGGTACTGCCCTAATGGATCAAACAGCGCCAAAGGAAGCGGGGCTTATTTACAGCCTTATGTT TATTACAAAGATCAGCCGGGACAATATGGTAACGATTTTGGAAAAAAATACTACATTCAGGAAGGAGTTACATACAACTG CCAAATATCTGTTAAGTTAAATACAGGATCAAATACAGACGGATATGTTAAGTATTATGTCAATGGTACTGAAATCTTAA ATGAAAAAATCCGCTGGGTGACTAACGATGCTAAGCGAAATGTTAATGCAGTAAGTCTTCACACTTTTAGAGGCGGCAGC CAGGAATACTGGAAAGCTCCTGTAACAAGTTCTATTTACTATCCTAGCGCATCTTGGGACGCTTTGTAA
Upstream 100 bases:
>100_bases AATATAATTTTTGAAAATTAGAAAACGCTCTCTTTTTCAACACGATAATAACCACAATTTATTAACTATTAATTATTTAC TAACCTTTAAAATTAAAACA
Downstream 100 bases:
>100_bases ATTATAATATATTTAATTCTAAATGCCCGTTTCTTAAAGGAACGGGCATTTTTATTATAAAATCATTCTAATAAAAAAAT GACAATTAATTAACGCAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MKRIFKLASMLFITALVFNSCEKEQDPDASQALNKEIAEAVKDEAPIVNNVSENASTAKGSTGARTITLQTNTLSCPGGL CTSYGVWSTGVYTVWFTMKFNNGFYWSRGGKCGYGILIGDQNTGGDPGWDGNGGSARFMWYCPNGSNSAKGSGAYLQPYV YYKDQPGQYGNDFGKKYYIQEGVTYNCQISVKLNTGSNTDGYVKYYVNGTEILNEKIRWVTNDAKRNVNAVSLHTFRGGS QEYWKAPVTSSIYYPSASWDAL
Sequences:
>Translated_262_residues MKRIFKLASMLFITALVFNSCEKEQDPDASQALNKEIAEAVKDEAPIVNNVSENASTAKGSTGARTITLQTNTLSCPGGL CTSYGVWSTGVYTVWFTMKFNNGFYWSRGGKCGYGILIGDQNTGGDPGWDGNGGSARFMWYCPNGSNSAKGSGAYLQPYV YYKDQPGQYGNDFGKKYYIQEGVTYNCQISVKLNTGSNTDGYVKYYVNGTEILNEKIRWVTNDAKRNVNAVSLHTFRGGS QEYWKAPVTSSIYYPSASWDAL >Mature_262_residues MKRIFKLASMLFITALVFNSCEKEQDPDASQALNKEIAEAVKDEAPIVNNVSENASTAKGSTGARTITLQTNTLSCPGGL CTSYGVWSTGVYTVWFTMKFNNGFYWSRGGKCGYGILIGDQNTGGDPGWDGNGGSARFMWYCPNGSNSAKGSGAYLQPYV YYKDQPGQYGNDFGKKYYIQEGVTYNCQISVKLNTGSNTDGYVKYYVNGTEILNEKIRWVTNDAKRNVNAVSLHTFRGGS QEYWKAPVTSSIYYPSASWDAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28837; Mature: 28837
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRIFKLASMLFITALVFNSCEKEQDPDASQALNKEIAEAVKDEAPIVNNVSENASTAKG CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC STGARTITLQTNTLSCPGGLCTSYGVWSTGVYTVWFTMKFNNGFYWSRGGKCGYGILIGD CCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCEEECCCCCCEEEEEEEC QNTGGDPGWDGNGGSARFMWYCPNGSNSAKGSGAYLQPYVYYKDQPGQYGNDFGKKYYIQ CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEE EGVTYNCQISVKLNTGSNTDGYVKYYVNGTEILNEKIRWVTNDAKRNVNAVSLHTFRGGS CCCEEEEEEEEEECCCCCCCCEEEEEECHHHHHHHHHHEEECHHHCCCEEEEEEEECCCC QEYWKAPVTSSIYYPSASWDAL HHHHCCCCCCEEEECCCCCCCC >Mature Secondary Structure MKRIFKLASMLFITALVFNSCEKEQDPDASQALNKEIAEAVKDEAPIVNNVSENASTAKG CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC STGARTITLQTNTLSCPGGLCTSYGVWSTGVYTVWFTMKFNNGFYWSRGGKCGYGILIGD CCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCEEECCCCCCEEEEEEEC QNTGGDPGWDGNGGSARFMWYCPNGSNSAKGSGAYLQPYVYYKDQPGQYGNDFGKKYYIQ CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEE EGVTYNCQISVKLNTGSNTDGYVKYYVNGTEILNEKIRWVTNDAKRNVNAVSLHTFRGGS CCCEEEEEEEEEECCCCCCCCEEEEEECHHHHHHHHHHEEECHHHCCCEEEEEEEECCCC QEYWKAPVTSSIYYPSASWDAL HHHHCCCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA