| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is 146300927
Identifier: 146300927
GI number: 146300927
Start: 3789758
End: 3790456
Strand: Reverse
Name: 146300927
Synonym: Fjoh_3182
Alternate gene names: NA
Gene position: 3790456-3789758 (Counterclockwise)
Preceding gene: 146300929
Following gene: 146300926
Centisome position: 62.17
GC content: 34.48
Gene sequence:
>699_bases ATGAATAATACATTTTCTGCCAGCAGCCAAATAGGAATGGTTTCTACTTTTTCTGAACTTGTACATACGGATTTCAAGGG AGAAATAAATGCATTATGCTGGTACAGAAATTTAGATGGCGATTTTAATGAGATTGTAACCAAACTGCGTTTAAAAGAAA ATATTACAGAAGTTTTTCCAGAAGATTTAATCGCGCTCCAGCTATCAGAAAAAGGCAGTACAGCACGGGAAATAATCTTA AATGATTTGCAGTTATTAACTGATTTTGGAGCTTCGCCTTCTCTTAATTTATTGAAATGTTATGAGCGTGATGATGAATT TGATTTTATCTCTACTGATGTATATTCATTTCATGTTGATCGTTCGCCTGTTGCAACAGATACTTTTTTATGCACCTATC ACGGAGCAGCAAGTGATATTGTTTCTAATTCTCAGGCAGAACAGAAAATTTTAATTCCAGAAATCAGGGCAAAGTTAAAA GAACTTCATGATGGACCTGAAGAAGAATTTGAAGAGTTTTTAAAAGAGAATTATTTTGATTTGCATTATCAGGTAAATAC CGATGCAGAACCTATTAATTTAGGATTGATGCATCTGTGGCGTCTGGCTGTAGATCATCCAAAACAACAAGTACTTCCTT GTATCCATAGGGCGCCAGTTGAAAATGATGGAGAATATCGATTGTTGTTGATTTGTTAA
Upstream 100 bases:
>100_bases ATTTTAGAAACCGAAAAAGGATTCCAAAAATTAAGCTGTAAGAATGCGTCAGCTGATTATGATTCTATATTTTTGCACAT AAATTAACTGATTTCTTATT
Downstream 100 bases:
>100_bases AGGAAATTGCTGATTTTCGTGATTCAGTAAATACTTTTGTGCAATTTTAGGAATTAAAATTATACGTTATGACTTTTAAT TTACAACCCATTTTAGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MNNTFSASSQIGMVSTFSELVHTDFKGEINALCWYRNLDGDFNEIVTKLRLKENITEVFPEDLIALQLSEKGSTAREIIL NDLQLLTDFGASPSLNLLKCYERDDEFDFISTDVYSFHVDRSPVATDTFLCTYHGAASDIVSNSQAEQKILIPEIRAKLK ELHDGPEEEFEEFLKENYFDLHYQVNTDAEPINLGLMHLWRLAVDHPKQQVLPCIHRAPVENDGEYRLLLIC
Sequences:
>Translated_232_residues MNNTFSASSQIGMVSTFSELVHTDFKGEINALCWYRNLDGDFNEIVTKLRLKENITEVFPEDLIALQLSEKGSTAREIIL NDLQLLTDFGASPSLNLLKCYERDDEFDFISTDVYSFHVDRSPVATDTFLCTYHGAASDIVSNSQAEQKILIPEIRAKLK ELHDGPEEEFEEFLKENYFDLHYQVNTDAEPINLGLMHLWRLAVDHPKQQVLPCIHRAPVENDGEYRLLLIC >Mature_232_residues MNNTFSASSQIGMVSTFSELVHTDFKGEINALCWYRNLDGDFNEIVTKLRLKENITEVFPEDLIALQLSEKGSTAREIIL NDLQLLTDFGASPSLNLLKCYERDDEFDFISTDVYSFHVDRSPVATDTFLCTYHGAASDIVSNSQAEQKILIPEIRAKLK ELHDGPEEEFEEFLKENYFDLHYQVNTDAEPINLGLMHLWRLAVDHPKQQVLPCIHRAPVENDGEYRLLLIC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26560; Mature: 26560
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNTFSASSQIGMVSTFSELVHTDFKGEINALCWYRNLDGDFNEIVTKLRLKENITEVFP CCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCC EDLIALQLSEKGSTAREIILNDLQLLTDFGASPSLNLLKCYERDDEFDFISTDVYSFHVD HHHEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHEEECCCCCCCEEECCEEEEEEC RSPVATDTFLCTYHGAASDIVSNSQAEQKILIPEIRAKLKELHDGPEEEFEEFLKENYFD CCCCCCCEEEEEECCCHHHHHCCCCCCCEEECHHHHHHHHHHCCCCHHHHHHHHHCCCEE LHYQVNTDAEPINLGLMHLWRLAVDHPKQQVLPCIHRAPVENDGEYRLLLIC EEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEEC >Mature Secondary Structure MNNTFSASSQIGMVSTFSELVHTDFKGEINALCWYRNLDGDFNEIVTKLRLKENITEVFP CCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCC EDLIALQLSEKGSTAREIILNDLQLLTDFGASPSLNLLKCYERDDEFDFISTDVYSFHVD HHHEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHEEECCCCCCCEEECCEEEEEEC RSPVATDTFLCTYHGAASDIVSNSQAEQKILIPEIRAKLKELHDGPEEEFEEFLKENYFD CCCCCCCEEEEEECCCHHHHHCCCCCCCEEECHHHHHHHHHHCCCCHHHHHHHHHCCCEE LHYQVNTDAEPINLGLMHLWRLAVDHPKQQVLPCIHRAPVENDGEYRLLLIC EEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA