Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146300929

Identifier: 146300929

GI number: 146300929

Start: 3791370

End: 3792785

Strand: Reverse

Name: 146300929

Synonym: Fjoh_3184

Alternate gene names: NA

Gene position: 3792785-3791370 (Counterclockwise)

Preceding gene: 146300930

Following gene: 146300927

Centisome position: 62.21

GC content: 32.7

Gene sequence:

>1416_bases
ATGAAATCGTTTTTAAAGCTTTTTCATGTATTAGTTGTTAATCTTCCTTATGAAGACATAATAAATACAAAGTATTCCAA
AATGATAAAAACCAATTTGTTTCCCCATTATAGTATTAGAAATATGAAATTATATGCACTCGTTCTAGCACTTATTGTGC
TGCCATTTACTGCATTCAGCCAAAAAGAAATAGCTCCCGGCAATAAGGATATTAATACGAAGTATATTAAACCAGAAAAG
TCGCTTTATACCGTATATTATGTTAAAGGTACAGAATGGAAAAATATGGGCGCATTGACTTATGATATTGTTGCTGCTAA
TAACCAATTGACTTTAAACAATACTTTTACTCCAAAAGACAATGGAAAACCAACCACACGTATAAGTACTGCAGATGCTC
AAACGCTTAAAGCCATCAGCTATACTGACGAAACGAAGAACGCAAAACTAAATCTTAATTTTGGTGAAACTATTACAGGT
AATTTCTATTCGAAGAAAACCAAAAAAGATAAAAAACTAAAACTTAATCCTAAGGTAGAATATTTTGATTTTAACTGGAC
TGATCACTTAATAGGAACATTACCGCTAGATGTAGGATATAAAGCCCGTTTTCCACAGTTTTATTATAATGATGAGTCAA
ATGTACTTGTTGAATATTATACCATTAAAGAGGTAAAAAGTTATGTTTACAATTCTCCAAGAACCGGTAAACATGAAACA
TGGATTGTATCCGTTTTAGAAGAAAGCACTGGTGCTTTTTACAATTATATCATTGACAAAAAAGACCGTCGCCTGTGGCA
GCGCGAAATGTCTATGGCTAACGGAATGTGGGAAATTACAGTTAACGAAGAGTTAGACTATCAGCCTATTAAAAACAAAT
TTAATAAAGAAGATGCTGCACGTCAGATTAGCAGTGGTAATAGTGTAATTATTGGTACAGCCTATGCACGATCAGACTCA
GGTAAGAGATTGGGCGGTTTAGTTAATACTGCCAAAAAACAGTATGCTCCAAGAGGTACAGAGATTACACTTTTTCCAAG
TTCTGCTTATTATGAAGAGTGGCTGGAAGTGAATAAAAAAATTCGTAAGCAGAAAAAAATGCCGGAAGTTCCTTTAAACA
GCGATTTTGGATACTCTATTAAAAAAGCCAAAGTTTATGATGATGAAGGACATTTTGAGTTTGCTGATCTTATGCCGGGT
ACTTACGTTGTTATGGTAAGCTTCGATTTTTCTAATTCTTATAATTATTCATACGTATCTGGTTATACTAATTATTATAA
TTATTTTGGCTATCAGGGTTCTACAACAAATTACGGAACAGCAAGACAATCTTATACTGATAAAGCCAATATTGAAAAGC
GTGTAACGATTGATAAAGACGGAGAAAAAAAGGAAGTGAATTTAAAAGAAATATAA

Upstream 100 bases:

>100_bases
CATGATATCAGGTATTGTTTTTTGTGTTTTACGTCATTAAATTTGCGACTAACCAAATAAATTCTAAAGGAAGTTAACAT
TTCAGACAGCTATTCTGGTA

Downstream 100 bases:

>100_bases
TAAAAAGCGAAGCCGTGTCATTATAAAATTTGACACGGCTTTCCTTTTATCGATAAATTTTTTTATATCAAAATGATTAA
AAAAGTAGAATAAGTATTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 471; Mature: 471

Protein sequence:

>471_residues
MKSFLKLFHVLVVNLPYEDIINTKYSKMIKTNLFPHYSIRNMKLYALVLALIVLPFTAFSQKEIAPGNKDINTKYIKPEK
SLYTVYYVKGTEWKNMGALTYDIVAANNQLTLNNTFTPKDNGKPTTRISTADAQTLKAISYTDETKNAKLNLNFGETITG
NFYSKKTKKDKKLKLNPKVEYFDFNWTDHLIGTLPLDVGYKARFPQFYYNDESNVLVEYYTIKEVKSYVYNSPRTGKHET
WIVSVLEESTGAFYNYIIDKKDRRLWQREMSMANGMWEITVNEELDYQPIKNKFNKEDAARQISSGNSVIIGTAYARSDS
GKRLGGLVNTAKKQYAPRGTEITLFPSSAYYEEWLEVNKKIRKQKKMPEVPLNSDFGYSIKKAKVYDDEGHFEFADLMPG
TYVVMVSFDFSNSYNYSYVSGYTNYYNYFGYQGSTTNYGTARQSYTDKANIEKRVTIDKDGEKKEVNLKEI

Sequences:

>Translated_471_residues
MKSFLKLFHVLVVNLPYEDIINTKYSKMIKTNLFPHYSIRNMKLYALVLALIVLPFTAFSQKEIAPGNKDINTKYIKPEK
SLYTVYYVKGTEWKNMGALTYDIVAANNQLTLNNTFTPKDNGKPTTRISTADAQTLKAISYTDETKNAKLNLNFGETITG
NFYSKKTKKDKKLKLNPKVEYFDFNWTDHLIGTLPLDVGYKARFPQFYYNDESNVLVEYYTIKEVKSYVYNSPRTGKHET
WIVSVLEESTGAFYNYIIDKKDRRLWQREMSMANGMWEITVNEELDYQPIKNKFNKEDAARQISSGNSVIIGTAYARSDS
GKRLGGLVNTAKKQYAPRGTEITLFPSSAYYEEWLEVNKKIRKQKKMPEVPLNSDFGYSIKKAKVYDDEGHFEFADLMPG
TYVVMVSFDFSNSYNYSYVSGYTNYYNYFGYQGSTTNYGTARQSYTDKANIEKRVTIDKDGEKKEVNLKEI
>Mature_471_residues
MKSFLKLFHVLVVNLPYEDIINTKYSKMIKTNLFPHYSIRNMKLYALVLALIVLPFTAFSQKEIAPGNKDINTKYIKPEK
SLYTVYYVKGTEWKNMGALTYDIVAANNQLTLNNTFTPKDNGKPTTRISTADAQTLKAISYTDETKNAKLNLNFGETITG
NFYSKKTKKDKKLKLNPKVEYFDFNWTDHLIGTLPLDVGYKARFPQFYYNDESNVLVEYYTIKEVKSYVYNSPRTGKHET
WIVSVLEESTGAFYNYIIDKKDRRLWQREMSMANGMWEITVNEELDYQPIKNKFNKEDAARQISSGNSVIIGTAYARSDS
GKRLGGLVNTAKKQYAPRGTEITLFPSSAYYEEWLEVNKKIRKQKKMPEVPLNSDFGYSIKKAKVYDDEGHFEFADLMPG
TYVVMVSFDFSNSYNYSYVSGYTNYYNYFGYQGSTTNYGTARQSYTDKANIEKRVTIDKDGEKKEVNLKEI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54463; Mature: 54463

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSFLKLFHVLVVNLPYEDIINTKYSKMIKTNLFPHYSIRNMKLYALVLALIVLPFTAFS
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
QKEIAPGNKDINTKYIKPEKSLYTVYYVKGTEWKNMGALTYDIVAANNQLTLNNTFTPKD
CCCCCCCCCCCCCEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCEEEECCEECCCC
NGKPTTRISTADAQTLKAISYTDETKNAKLNLNFGETITGNFYSKKTKKDKKLKLNPKVE
CCCCCEEEECCCHHHEEEEEECCCCCCCEEEEECCCEEECCCCCCCCCCCCEEEECCCEE
YFDFNWTDHLIGTLPLDVGYKARFPQFYYNDESNVLVEYYTIKEVKSYVYNSPRTGKHET
EEECCCHHHEEEEEEECCCCCCCCCEEEECCCCCEEEEEEEHHHHHHHHCCCCCCCCCCE
WIVSVLEESTGAFYNYIIDKKDRRLWQREMSMANGMWEITVNEELDYQPIKNKFNKEDAA
EEEEEEHHCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHCCHHHHH
RQISSGNSVIIGTAYARSDSGKRLGGLVNTAKKQYAPRGTEITLFPSSAYYEEWLEVNKK
HHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHH
IRKQKKMPEVPLNSDFGYSIKKAKVYDDEGHFEFADLMPGTYVVMVSFDFSNSYNYSYVS
HHHHHCCCCCCCCCCCCCEEEEEEEECCCCCEEHHHCCCCEEEEEEEEECCCCCCEEEEC
GYTNYYNYFGYQGSTTNYGTARQSYTDKANIEKRVTIDKDGEKKEVNLKEI
CCCHHHHEECCCCCCCCCCCCHHCCCCCCCCEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MKSFLKLFHVLVVNLPYEDIINTKYSKMIKTNLFPHYSIRNMKLYALVLALIVLPFTAFS
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
QKEIAPGNKDINTKYIKPEKSLYTVYYVKGTEWKNMGALTYDIVAANNQLTLNNTFTPKD
CCCCCCCCCCCCCEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCEEEECCEECCCC
NGKPTTRISTADAQTLKAISYTDETKNAKLNLNFGETITGNFYSKKTKKDKKLKLNPKVE
CCCCCEEEECCCHHHEEEEEECCCCCCCEEEEECCCEEECCCCCCCCCCCCEEEECCCEE
YFDFNWTDHLIGTLPLDVGYKARFPQFYYNDESNVLVEYYTIKEVKSYVYNSPRTGKHET
EEECCCHHHEEEEEEECCCCCCCCCEEEECCCCCEEEEEEEHHHHHHHHCCCCCCCCCCE
WIVSVLEESTGAFYNYIIDKKDRRLWQREMSMANGMWEITVNEELDYQPIKNKFNKEDAA
EEEEEEHHCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHCCHHHHH
RQISSGNSVIIGTAYARSDSGKRLGGLVNTAKKQYAPRGTEITLFPSSAYYEEWLEVNKK
HHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHH
IRKQKKMPEVPLNSDFGYSIKKAKVYDDEGHFEFADLMPGTYVVMVSFDFSNSYNYSYVS
HHHHHCCCCCCCCCCCCCEEEEEEEECCCCCEEHHHCCCCEEEEEEEEECCCCCCEEEEC
GYTNYYNYFGYQGSTTNYGTARQSYTDKANIEKRVTIDKDGEKKEVNLKEI
CCCHHHHEECCCCCCCCCCCCHHCCCCCCCCEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA