| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300912
Identifier: 146300912
GI number: 146300912
Start: 3769647
End: 3770465
Strand: Direct
Name: 146300912
Synonym: Fjoh_3167
Alternate gene names: NA
Gene position: 3769647-3770465 (Clockwise)
Preceding gene: 146300911
Following gene: 146300913
Centisome position: 61.83
GC content: 36.75
Gene sequence:
>819_bases ATGCAAAAAACATTCTACCAAAAAGAACTGCTTATTAAAGCAGTACAACAAAGAAAAGGAGTAAATAATAACAAGAAAGA CGTTGAAAAAATTCAGTCCTGGCTTAATTTATTTGCTATGCAGAATCCAAACTCCGGAACTGCAACCGATATTGATGGCG ATTTTGGTCCTGCAACAGAAAAAGCAGTATTGAATTTTCAAAAAGCGAATGGTCAGCCTCAAACCGGAAATGTAGATCAA AACCTGTTTGATAAACTCGTGTCGCCTCTTAAAAAAGCTTTTGAAAGTCCGATATCTGGAAACAATCTGAGGGAATTAAT TCTAAATACAGCACAAAATCATCTTAAAAATCATCCCTTTGAACTTGTCATAAACAACCAAAGTAATACGGGGCCGTGGG TTCGAAGCTATATGGATGGACATGAAGGAACAGAATGGTTTTGGTGTATGGGTTTTGTTCAGGCCATTATCGATCAGGCG GCATCTATTCAGGGAAAAAACTTTAAAACTCTAATGCCGTTAACTTACAGCTGTGATACTGTGGGCACAACTGGTCTACA GAAAAAGATACTGACACGTTATCAAACTGCCAGAACCAATTCGGCTTTAATAAAACCAGGAGATATATTTCTTCTTCAAA AAACACCAAACGACTGGATTCACACCGGAATTGTAACTGCTGTTCATGCTGATACCATAGAAACTATTGAAGGCAACACC AATGCCGGCGGTTCTAATAATGGAAATGCTGTCATGAACAAAATCAGAAATTATAAACAATCAAAACTTGATTTTTTTTC AATCGAATCATTAGTATAG
Upstream 100 bases:
>100_bases TGATAAGAAACAATGTTGAAAAAAACATTTTTGCTTGGTGTCTTTTCAAATTGAAAAAACTTGATAAGAAAAATTTTTAT AAACTTAAAAAACATTAGTC
Downstream 100 bases:
>100_bases AAAAATGGAAAATGTATTTACCTATATCAAAAACCAATTCGTATTTCAGCTTGATACTCTTTTTCAAGTCGAAAATCCAA TGGGAAAACCTATTTTAAAT
Product: peptidoglycan binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MQKTFYQKELLIKAVQQRKGVNNNKKDVEKIQSWLNLFAMQNPNSGTATDIDGDFGPATEKAVLNFQKANGQPQTGNVDQ NLFDKLVSPLKKAFESPISGNNLRELILNTAQNHLKNHPFELVINNQSNTGPWVRSYMDGHEGTEWFWCMGFVQAIIDQA ASIQGKNFKTLMPLTYSCDTVGTTGLQKKILTRYQTARTNSALIKPGDIFLLQKTPNDWIHTGIVTAVHADTIETIEGNT NAGGSNNGNAVMNKIRNYKQSKLDFFSIESLV
Sequences:
>Translated_272_residues MQKTFYQKELLIKAVQQRKGVNNNKKDVEKIQSWLNLFAMQNPNSGTATDIDGDFGPATEKAVLNFQKANGQPQTGNVDQ NLFDKLVSPLKKAFESPISGNNLRELILNTAQNHLKNHPFELVINNQSNTGPWVRSYMDGHEGTEWFWCMGFVQAIIDQA ASIQGKNFKTLMPLTYSCDTVGTTGLQKKILTRYQTARTNSALIKPGDIFLLQKTPNDWIHTGIVTAVHADTIETIEGNT NAGGSNNGNAVMNKIRNYKQSKLDFFSIESLV >Mature_272_residues MQKTFYQKELLIKAVQQRKGVNNNKKDVEKIQSWLNLFAMQNPNSGTATDIDGDFGPATEKAVLNFQKANGQPQTGNVDQ NLFDKLVSPLKKAFESPISGNNLRELILNTAQNHLKNHPFELVINNQSNTGPWVRSYMDGHEGTEWFWCMGFVQAIIDQA ASIQGKNFKTLMPLTYSCDTVGTTGLQKKILTRYQTARTNSALIKPGDIFLLQKTPNDWIHTGIVTAVHADTIETIEGNT NAGGSNNGNAVMNKIRNYKQSKLDFFSIESLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30339; Mature: 30339
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKTFYQKELLIKAVQQRKGVNNNKKDVEKIQSWLNLFAMQNPNSGTATDIDGDFGPATE CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH KAVLNFQKANGQPQTGNVDQNLFDKLVSPLKKAFESPISGNNLRELILNTAQNHLKNHPF HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCE ELVINNQSNTGPWVRSYMDGHEGTEWFWCMGFVQAIIDQAASIQGKNFKTLMPLTYSCDT EEEECCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEECCCC VGTTGLQKKILTRYQTARTNSALIKPGDIFLLQKTPNDWIHTGIVTAVHADTIETIEGNT CCCHHHHHHHHHHHHHHCCCCCEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCC NAGGSNNGNAVMNKIRNYKQSKLDFFSIESLV CCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCC >Mature Secondary Structure MQKTFYQKELLIKAVQQRKGVNNNKKDVEKIQSWLNLFAMQNPNSGTATDIDGDFGPATE CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH KAVLNFQKANGQPQTGNVDQNLFDKLVSPLKKAFESPISGNNLRELILNTAQNHLKNHPF HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCE ELVINNQSNTGPWVRSYMDGHEGTEWFWCMGFVQAIIDQAASIQGKNFKTLMPLTYSCDT EEEECCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEECCCC VGTTGLQKKILTRYQTARTNSALIKPGDIFLLQKTPNDWIHTGIVTAVHADTIETIEGNT CCCHHHHHHHHHHHHHHCCCCCEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCC NAGGSNNGNAVMNKIRNYKQSKLDFFSIESLV CCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA