| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300910
Identifier: 146300910
GI number: 146300910
Start: 3764288
End: 3765505
Strand: Direct
Name: 146300910
Synonym: Fjoh_3165
Alternate gene names: NA
Gene position: 3764288-3765505 (Clockwise)
Preceding gene: 146300909
Following gene: 146300911
Centisome position: 61.74
GC content: 37.11
Gene sequence:
>1218_bases ATGAGAGAATTTGAACAAAAAAAAGCAGTTAATCACTCTCCTTCTACTTTTTTTGGGCCAAAAGTTCAAAAAAAACTGAC TACAGGCACTGTTGGAGACAAATACGAAACAGAAGCTGATAGTGTTGCAGACAAAGTAGTTAACAAACGTAATACAGGAG GTTTACTGCAATCTAAAAGTGAAAACACTGTACAGCAAAAACCTATTTCAGAAACTATTTCAACGGTTCAAAAACAAGAT TTAGCACAAGAAAAGCCTTTACAAAAAAAGGGCAAAGAAAAAGAAGAAGATAAAAAAGTGCAAAAGAAATCCGATAAGGA AGAAGATAAAAAGGTACAGAAAAAAGGAGAAAAAGAGGAAGACAAAAAGGTTCAAAAGAAATCCGATAAGGAAGAAGATA AAAAAGTACAGAAAAAGGAAAAAAAAGAAGAAGACAAGAAAGTACAGAAAAAATGTGCCGATTGCGAAAACGAAGACAAG AAGGCTCAGAAGAAAGAAGAAAAAAAAGACGAAAAACCAGTTCAGGCAAAGTTTAAGGAATCAAACTCAGTAAATGAAGG AGTCGAAAATACTCTCAACAGCTCAAAAGGCGGCGGCAGTGCTATGGATAAAAATACAAAGCAGGAAATGGAATCTGGTT TTGGTGCCGATTTCAGCAATGTAAACATCCATACAGACAGCAAAGCTGTACAAATGAGTGAAGAACTGGGCGCGCAGGCT TTTACACACGGCAGCGATGTTTATTTCAATAAAGGAAAATACAACCCAGACTCTAAAGAAGGTAAACATTTGCTTGCGCA TGAACTCACGCACACAATACAGCAAACAGGCAGTAAAGCCCGAAATAATGTTCAAAAAAAGGACATGCTGCAATTATCGA CAATGCCCTGGAACATTAGCCGATGGACAACTCAGGTAAGAGAGTCTAATAATTTTACCGTGAGTAATGGCGGAACGGTT ACAGTAACATCAAATTTAGCTTGGGATGGTCCGCCAAGATGCAGGGATATTGCCAGCACAATAGAAGTAAATATATATAG AAAAAGATTTTTAATAGACAGCAAAGAACATAGCGCCTCAATTTCATTATCAGGAGGAAGTACTTCGGTTTCTAATTTAA CTGATGGCACTTATTATGTAGAAATTGTCTTAAGCGGCTATAATGGCGATCCAACACATTGCAGTTTAGCAGGAAGAGTT GACATTGATGCAACCTGA
Upstream 100 bases:
>100_bases AGATAAAAAATGCATTAGAGAAAGAAGGTATTGTGGCGAGTAATGCACAGTTTGTTTAGTGAAACAAATTAGTAATCCAA AATGGTAAAAAGGACTAATC
Downstream 100 bases:
>100_bases TAACGAAATGATTTTCTGTAAAATATAATAATCAAATATGCCAGTTTTAACCAAAAAAACAAATACGAATCCTTCGCACT CCTCGTCACACCATGACAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MREFEQKKAVNHSPSTFFGPKVQKKLTTGTVGDKYETEADSVADKVVNKRNTGGLLQSKSENTVQQKPISETISTVQKQD LAQEKPLQKKGKEKEEDKKVQKKSDKEEDKKVQKKGEKEEDKKVQKKSDKEEDKKVQKKEKKEEDKKVQKKCADCENEDK KAQKKEEKKDEKPVQAKFKESNSVNEGVENTLNSSKGGGSAMDKNTKQEMESGFGADFSNVNIHTDSKAVQMSEELGAQA FTHGSDVYFNKGKYNPDSKEGKHLLAHELTHTIQQTGSKARNNVQKKDMLQLSTMPWNISRWTTQVRESNNFTVSNGGTV TVTSNLAWDGPPRCRDIASTIEVNIYRKRFLIDSKEHSASISLSGGSTSVSNLTDGTYYVEIVLSGYNGDPTHCSLAGRV DIDAT
Sequences:
>Translated_405_residues MREFEQKKAVNHSPSTFFGPKVQKKLTTGTVGDKYETEADSVADKVVNKRNTGGLLQSKSENTVQQKPISETISTVQKQD LAQEKPLQKKGKEKEEDKKVQKKSDKEEDKKVQKKGEKEEDKKVQKKSDKEEDKKVQKKEKKEEDKKVQKKCADCENEDK KAQKKEEKKDEKPVQAKFKESNSVNEGVENTLNSSKGGGSAMDKNTKQEMESGFGADFSNVNIHTDSKAVQMSEELGAQA FTHGSDVYFNKGKYNPDSKEGKHLLAHELTHTIQQTGSKARNNVQKKDMLQLSTMPWNISRWTTQVRESNNFTVSNGGTV TVTSNLAWDGPPRCRDIASTIEVNIYRKRFLIDSKEHSASISLSGGSTSVSNLTDGTYYVEIVLSGYNGDPTHCSLAGRV DIDAT >Mature_405_residues MREFEQKKAVNHSPSTFFGPKVQKKLTTGTVGDKYETEADSVADKVVNKRNTGGLLQSKSENTVQQKPISETISTVQKQD LAQEKPLQKKGKEKEEDKKVQKKSDKEEDKKVQKKGEKEEDKKVQKKSDKEEDKKVQKKEKKEEDKKVQKKCADCENEDK KAQKKEEKKDEKPVQAKFKESNSVNEGVENTLNSSKGGGSAMDKNTKQEMESGFGADFSNVNIHTDSKAVQMSEELGAQA FTHGSDVYFNKGKYNPDSKEGKHLLAHELTHTIQQTGSKARNNVQKKDMLQLSTMPWNISRWTTQVRESNNFTVSNGGTV TVTSNLAWDGPPRCRDIASTIEVNIYRKRFLIDSKEHSASISLSGGSTSVSNLTDGTYYVEIVLSGYNGDPTHCSLAGRV DIDAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45238; Mature: 45238
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREFEQKKAVNHSPSTFFGPKVQKKLTTGTVGDKYETEADSVADKVVNKRNTGGLLQSKS CCHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC ENTVQQKPISETISTVQKQDLAQEKPLQKKGKEKEEDKKVQKKSDKEEDKKVQKKGEKEE CCHHHHCCHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCHH DKKVQKKSDKEEDKKVQKKEKKEEDKKVQKKCADCENEDKKAQKKEEKKDEKPVQAKFKE HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHH SNSVNEGVENTLNSSKGGGSAMDKNTKQEMESGFGADFSNVNIHTDSKAVQMSEELGAQA CCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHCHHH FTHGSDVYFNKGKYNPDSKEGKHLLAHELTHTIQQTGSKARNNVQKKDMLQLSTMPWNIS HCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHH RWTTQVRESNNFTVSNGGTVTVTSNLAWDGPPRCRDIASTIEVNIYRKRFLIDSKEHSAS HHHHHHHCCCCEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHEEHHHHEECCCCCCCE ISLSGGSTSVSNLTDGTYYVEIVLSGYNGDPTHCSLAGRVDIDAT EEECCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEECCEECCCC >Mature Secondary Structure MREFEQKKAVNHSPSTFFGPKVQKKLTTGTVGDKYETEADSVADKVVNKRNTGGLLQSKS CCHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC ENTVQQKPISETISTVQKQDLAQEKPLQKKGKEKEEDKKVQKKSDKEEDKKVQKKGEKEE CCHHHHCCHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCHH DKKVQKKSDKEEDKKVQKKEKKEEDKKVQKKCADCENEDKKAQKKEEKKDEKPVQAKFKE HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHH SNSVNEGVENTLNSSKGGGSAMDKNTKQEMESGFGADFSNVNIHTDSKAVQMSEELGAQA CCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHCHHH FTHGSDVYFNKGKYNPDSKEGKHLLAHELTHTIQQTGSKARNNVQKKDMLQLSTMPWNIS HCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHH RWTTQVRESNNFTVSNGGTVTVTSNLAWDGPPRCRDIASTIEVNIYRKRFLIDSKEHSAS HHHHHHHCCCCEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHEEHHHHEECCCCCCCE ISLSGGSTSVSNLTDGTYYVEIVLSGYNGDPTHCSLAGRVDIDAT EEECCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEECCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA