| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is 146300893
Identifier: 146300893
GI number: 146300893
Start: 3742714
End: 3743316
Strand: Direct
Name: 146300893
Synonym: Fjoh_3148
Alternate gene names: NA
Gene position: 3742714-3743316 (Clockwise)
Preceding gene: 146300890
Following gene: 146300894
Centisome position: 61.39
GC content: 33.0
Gene sequence:
>603_bases ATGATTTTTGAAGTAATACAAATAATTGCAGAACAGGTAAATAACTATCTCGAAGAAATTGGGTTAGAGAAAACTGTTGT ACCCGAAAATATTGCTTTTTTAGAATCGCAAAGTAATGATATAGACGATCCTTTAAAAGATGGCGTAGCACTTACGTTAA TCAATATTCACGAAGAAGCTGCTTTAAAAAACTTCCCAAATCATACGGTTGAAAATACAAAAACAATATACAGAAACAGC ATCATCAATTTAAACCTGTATTTGCTGTTTAGCGCCAATAGAGATAAGTATATCAATTCTCTTAATGATATTTCAAAAAT CATAGAATTTTTTCAGGGAAAAAAACTTTTTACACAAGCCAATACCATTTATAACCGAAACAGCAGCGCAATGAGCAATG TAGACAATTTTAGATTTACGGTTGAGCTCTACACTCCCACTTTTGAAGAACTAAATTATATCTGGGGAACATTGGGCGGC AAACAGCTTCCATCGGCTTTATATAAAGTAAGCCTGATACAAATTGAACGCAATATTGTACAGGCTGAAGGACAGCTTAT TGGCGAATTTTCTGGTATAACTAAAAAGAAAGATCAACAATGA
Upstream 100 bases:
>100_bases AGTCAAATCTTAAAAGCACAGTCAGAAGCCCCATTCTAGTTACAATCTGCGCCATGAATCATTACTATTTCATTTAATAC TTATACAATTTTATCAAAAG
Downstream 100 bases:
>100_bases GTTTTGATGCCACATACGGATTGTTGTTTGAAGTAACGTTTCTTCATAATTATTTCCTCAATAACGGAGAAGAAACTTTT GCGAGTATGACAAATGCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MIFEVIQIIAEQVNNYLEEIGLEKTVVPENIAFLESQSNDIDDPLKDGVALTLINIHEEAALKNFPNHTVENTKTIYRNS IINLNLYLLFSANRDKYINSLNDISKIIEFFQGKKLFTQANTIYNRNSSAMSNVDNFRFTVELYTPTFEELNYIWGTLGG KQLPSALYKVSLIQIERNIVQAEGQLIGEFSGITKKKDQQ
Sequences:
>Translated_200_residues MIFEVIQIIAEQVNNYLEEIGLEKTVVPENIAFLESQSNDIDDPLKDGVALTLINIHEEAALKNFPNHTVENTKTIYRNS IINLNLYLLFSANRDKYINSLNDISKIIEFFQGKKLFTQANTIYNRNSSAMSNVDNFRFTVELYTPTFEELNYIWGTLGG KQLPSALYKVSLIQIERNIVQAEGQLIGEFSGITKKKDQQ >Mature_200_residues MIFEVIQIIAEQVNNYLEEIGLEKTVVPENIAFLESQSNDIDDPLKDGVALTLINIHEEAALKNFPNHTVENTKTIYRNS IINLNLYLLFSANRDKYINSLNDISKIIEFFQGKKLFTQANTIYNRNSSAMSNVDNFRFTVELYTPTFEELNYIWGTLGG KQLPSALYKVSLIQIERNIVQAEGQLIGEFSGITKKKDQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22859; Mature: 22859
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFEVIQIIAEQVNNYLEEIGLEKTVVPENIAFLESQSNDIDDPLKDGVALTLINIHEEA CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEECCCCCCCCHHHCCEEEEEEECHHHH ALKNFPNHTVENTKTIYRNSIINLNLYLLFSANRDKYINSLNDISKIIEFFQGKKLFTQA HHHCCCCCCHHHHHHHHHCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHH NTIYNRNSSAMSNVDNFRFTVELYTPTFEELNYIWGTLGGKQLPSALYKVSLIQIERNIV HHHHCCCCHHHHCCCCEEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH QAEGQLIGEFSGITKKKDQQ HHCCHHHHHHHCCCCCCCCC >Mature Secondary Structure MIFEVIQIIAEQVNNYLEEIGLEKTVVPENIAFLESQSNDIDDPLKDGVALTLINIHEEA CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEECCCCCCCCHHHCCEEEEEEECHHHH ALKNFPNHTVENTKTIYRNSIINLNLYLLFSANRDKYINSLNDISKIIEFFQGKKLFTQA HHHCCCCCCHHHHHHHHHCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHH NTIYNRNSSAMSNVDNFRFTVELYTPTFEELNYIWGTLGGKQLPSALYKVSLIQIERNIV HHHHCCCCHHHHCCCCEEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH QAEGQLIGEFSGITKKKDQQ HHCCHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA