| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300894
Identifier: 146300894
GI number: 146300894
Start: 3743313
End: 3744149
Strand: Direct
Name: 146300894
Synonym: Fjoh_3149
Alternate gene names: NA
Gene position: 3743313-3744149 (Clockwise)
Preceding gene: 146300893
Following gene: 146300895
Centisome position: 61.4
GC content: 32.97
Gene sequence:
>837_bases ATGAGTTTTGATGCCACATACGGATTGTTGTTTGAAGTAACGTTTCTTCATAATTATTTCCTCAATAACGGAGAAGAAAC TTTTGCGAGTATGACAAATGCTGATAAACAAAAAATGCTCCAGCAGTTTAGTACAGATGCTTTCCTGGTATTAACACCCA CTTTAGAAACCAATACTGTACTCAAAAACTATAAAATGACATTCAAAAAAACCAAAACAGGTTTTAGAATATATACTAAA GTAAAAGATGAATTTGAACCATTTATAAAAATCCCTGCAAATCTGAACCTTACGTTTTTAATTAAAATTAATGATTATCA ATTTGAAAATTATACTAATCTTGATTTTGCTCTTACTCAGGCATATCATTTCAGTAATGTAAAACCATTAACTGAACCCG TTTCGTTTGAATATCTTCCAAAAATAAGTGACAACAAACTTATTTCAAATGCATATTTAGTATCTGAAGAAACTACTGCT TATTTAGTTTCAGCACTGGAACCGTCAGAACAGCAAAATGTATTTGGCATTATTTCACTAACCGCAAAGGGCGACAACAG CTCTGGAAACATTGTAAATACTTTGGGCAAAATGCTGAGCCCGAATTTTAAAATACATTTTGATAATCGGAAAACGCTTT GGAAATACATTAACCGAAAAGCAGGAACCGAAATTAAAACCAACGCCGCAAAACCATTAACACGTTCCGGTTTTGTAGAA ATTGACCCGCTTACCGATTTTACGCCTGCGCAGCCGGCAGAAAGCCAGTATCCAAATCCATCTGTAAAATCAATAACAAA AATCAATAGTGATTACTATTCGGAAATATTTATTTAA
Upstream 100 bases:
>100_bases TATATAAAGTAAGCCTGATACAAATTGAACGCAATATTGTACAGGCTGAAGGACAGCTTATTGGCGAATTTTCTGGTATA ACTAAAAAGAAAGATCAACA
Downstream 100 bases:
>100_bases TAATTAAAAAACAAATCAATTATGGCAACAACTTACAAAACGCCTGGAGTATATGTTGAGGAAATCGTAAAGTTTCCCCC TTCTGTTGCCCAGGTAGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MSFDATYGLLFEVTFLHNYFLNNGEETFASMTNADKQKMLQQFSTDAFLVLTPTLETNTVLKNYKMTFKKTKTGFRIYTK VKDEFEPFIKIPANLNLTFLIKINDYQFENYTNLDFALTQAYHFSNVKPLTEPVSFEYLPKISDNKLISNAYLVSEETTA YLVSALEPSEQQNVFGIISLTAKGDNSSGNIVNTLGKMLSPNFKIHFDNRKTLWKYINRKAGTEIKTNAAKPLTRSGFVE IDPLTDFTPAQPAESQYPNPSVKSITKINSDYYSEIFI
Sequences:
>Translated_278_residues MSFDATYGLLFEVTFLHNYFLNNGEETFASMTNADKQKMLQQFSTDAFLVLTPTLETNTVLKNYKMTFKKTKTGFRIYTK VKDEFEPFIKIPANLNLTFLIKINDYQFENYTNLDFALTQAYHFSNVKPLTEPVSFEYLPKISDNKLISNAYLVSEETTA YLVSALEPSEQQNVFGIISLTAKGDNSSGNIVNTLGKMLSPNFKIHFDNRKTLWKYINRKAGTEIKTNAAKPLTRSGFVE IDPLTDFTPAQPAESQYPNPSVKSITKINSDYYSEIFI >Mature_277_residues SFDATYGLLFEVTFLHNYFLNNGEETFASMTNADKQKMLQQFSTDAFLVLTPTLETNTVLKNYKMTFKKTKTGFRIYTKV KDEFEPFIKIPANLNLTFLIKINDYQFENYTNLDFALTQAYHFSNVKPLTEPVSFEYLPKISDNKLISNAYLVSEETTAY LVSALEPSEQQNVFGIISLTAKGDNSSGNIVNTLGKMLSPNFKIHFDNRKTLWKYINRKAGTEIKTNAAKPLTRSGFVEI DPLTDFTPAQPAESQYPNPSVKSITKINSDYYSEIFI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31714; Mature: 31583
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFDATYGLLFEVTFLHNYFLNNGEETFASMTNADKQKMLQQFSTDAFLVLTPTLETNTV CCCCCCHHHEEHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHCCCEEEEEECCCCCCHH LKNYKMTFKKTKTGFRIYTKVKDEFEPFIKIPANLNLTFLIKINDYQFENYTNLDFALTQ HHHHEEEEEECCCCEEEEEEECCCCCCEEECCCCCCEEEEEEEECEEECCCCCCCEEEEE AYHFSNVKPLTEPVSFEYLPKISDNKLISNAYLVSEETTAYLVSALEPSEQQNVFGIISL HHHCCCCCCCCCCCCEEECCCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCEEEEEEE TAKGDNSSGNIVNTLGKMLSPNFKIHFDNRKTLWKYINRKAGTEIKTNAAKPLTRSGFVE EECCCCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCEEECCCCCCCCCCCCEE IDPLTDFTPAQPAESQYPNPSVKSITKINSDYYSEIFI ECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHEECC >Mature Secondary Structure SFDATYGLLFEVTFLHNYFLNNGEETFASMTNADKQKMLQQFSTDAFLVLTPTLETNTV CCCCCHHHEEHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHCCCEEEEEECCCCCCHH LKNYKMTFKKTKTGFRIYTKVKDEFEPFIKIPANLNLTFLIKINDYQFENYTNLDFALTQ HHHHEEEEEECCCCEEEEEEECCCCCCEEECCCCCCEEEEEEEECEEECCCCCCCEEEEE AYHFSNVKPLTEPVSFEYLPKISDNKLISNAYLVSEETTAYLVSALEPSEQQNVFGIISL HHHCCCCCCCCCCCCEEECCCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCEEEEEEE TAKGDNSSGNIVNTLGKMLSPNFKIHFDNRKTLWKYINRKAGTEIKTNAAKPLTRSGFVE EECCCCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCEEECCCCCCCCCCCCEE IDPLTDFTPAQPAESQYPNPSVKSITKINSDYYSEIFI ECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA