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The map label for this gene is yciF [H]

Identifier: 146300886

GI number: 146300886

Start: 3730673

End: 3731242

Strand: Direct

Name: yciF [H]

Synonym: Fjoh_3141

Alternate gene names: 146300886

Gene position: 3730673-3731242 (Clockwise)

Preceding gene: 146300885

Following gene: 146300890

Centisome position: 61.19

GC content: 38.77

Gene sequence:

>570_bases
ATGAAAAATTCAGAAAAACCAAATAATACAAAAGCTGCAGACAAAACTCCCAAAAATGGAATTGTACAGCCTGCAGCCGA
TGCTGCCACAGAATTAAAAGCTTTATTTGTTGACAGCCTTAAAGATATCTATTGGGCAGAAAATGCCCTGGTTGGCGCGC
TACCAAAAATGCAGAACAATGCTACAGATGCAGCTCTTGCTTCTGCTATAAAAGAACATCATGCCGTAACACAAAATCAG
GTAAAAAGACTTGAAAAAGTTTTTGAACTGCTTGGTGAAAAAGCAGAAGGAAAAAAATGCGAAGCAATGGCAGGATTACT
TAAAGAAGGTGACAGTATTCTGGAAGAAACCCAGCCAGGAGCAGTTCGTGATGCAGGAATTATTGCGGCTTCACAAAAAA
TCGAGCATTATGAAATTGCAACTTATGGAACACTTGTAGCATTTGCAAAAACGCTGGGAGAAAACGATGCTGCAAAATTG
CTGACTCAGACACTTGCTGAAGAAAAAGAAGCAGACTGTTTACTAAATGATGTCGCATTAAATACCGTAAATATTGTAGC
TGCAGAATAA

Upstream 100 bases:

>100_bases
CAAGTGAAAAATTTGCAAAAGATTTTATACAAGCAATGGGAAAACATAGATTTTGGGAACGCGAACCAAATCTGTACAAT
TAAAACTAAATAAGAGAACT

Downstream 100 bases:

>100_bases
CAGCTGTAGTATTAAATAAAAAAAATCTGCACTTGCTGCAGATTTTTTTTGTTTATCGTTAATATGGAGGTGCTGTAGTA
TTAAAAACGATTATTGGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MKNSEKPNNTKAADKTPKNGIVQPAADAATELKALFVDSLKDIYWAENALVGALPKMQNNATDAALASAIKEHHAVTQNQ
VKRLEKVFELLGEKAEGKKCEAMAGLLKEGDSILEETQPGAVRDAGIIAASQKIEHYEIATYGTLVAFAKTLGENDAAKL
LTQTLAEEKEADCLLNDVALNTVNIVAAE

Sequences:

>Translated_189_residues
MKNSEKPNNTKAADKTPKNGIVQPAADAATELKALFVDSLKDIYWAENALVGALPKMQNNATDAALASAIKEHHAVTQNQ
VKRLEKVFELLGEKAEGKKCEAMAGLLKEGDSILEETQPGAVRDAGIIAASQKIEHYEIATYGTLVAFAKTLGENDAAKL
LTQTLAEEKEADCLLNDVALNTVNIVAAE
>Mature_189_residues
MKNSEKPNNTKAADKTPKNGIVQPAADAATELKALFVDSLKDIYWAENALVGALPKMQNNATDAALASAIKEHHAVTQNQ
VKRLEKVFELLGEKAEGKKCEAMAGLLKEGDSILEETQPGAVRDAGIIAASQKIEHYEIATYGTLVAFAKTLGENDAAKL
LTQTLAEEKEADCLLNDVALNTVNIVAAE

Specific function: Unknown

COG id: COG3685

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787512, Length=151, Percent_Identity=44.3708609271523, Blast_Score=124, Evalue=5e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010287
- InterPro:   IPR012347
- InterPro:   IPR009078 [H]

Pfam domain/function: PF05974 DUF892 [H]

EC number: NA

Molecular weight: Translated: 20187; Mature: 20187

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNSEKPNNTKAADKTPKNGIVQPAADAATELKALFVDSLKDIYWAENALVGALPKMQNN
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC
ATDAALASAIKEHHAVTQNQVKRLEKVFELLGEKAEGKKCEAMAGLLKEGDSILEETQPG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHCCCC
AVRDAGIIAASQKIEHYEIATYGTLVAFAKTLGENDAAKLLTQTLAEEKEADCLLNDVAL
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NTVNIVAAE
HHEEEEECC
>Mature Secondary Structure
MKNSEKPNNTKAADKTPKNGIVQPAADAATELKALFVDSLKDIYWAENALVGALPKMQNN
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC
ATDAALASAIKEHHAVTQNQVKRLEKVFELLGEKAEGKKCEAMAGLLKEGDSILEETQPG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHCCCC
AVRDAGIIAASQKIEHYEIATYGTLVAFAKTLGENDAAKLLTQTLAEEKEADCLLNDVAL
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NTVNIVAAE
HHEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3058546; 9097039; 9278503; 8455549 [H]