Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
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Accession | NC_009441 |
Length | 6,096,872 |
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The map label for this gene is 146300869
Identifier: 146300869
GI number: 146300869
Start: 3706420
End: 3708693
Strand: Reverse
Name: 146300869
Synonym: Fjoh_3124
Alternate gene names: NA
Gene position: 3708693-3706420 (Counterclockwise)
Preceding gene: 146300870
Following gene: 146300868
Centisome position: 60.83
GC content: 37.2
Gene sequence:
>2274_bases ATGAAAATATACAGTAAAAATATACTTTTAGGAATATCACTTTTGTTTGCGATAACTTCTTATGCCCAAAAAACAGTTTA CCAATATGTAGATCCCATGATTGGATCTGAAGGAGTCGGCAGGGTTTTTATCGGGCCTTCTTGTCCGTACGGAATGGTAA AGCCAAGTCCTGATTGTACAGTAAGTCCAAACAGCGGATGGCTTCCAATGCCTAAAGAAGTTACAGGATTCAGTCAGGTG CATGTGAGCGGAACAGGCGGCGGTCCAAAATACGGGAACATCTCAATTATGCCATTTTCCGGAGCTTTAGACAAAATGGA TCAGACTTCTTTCAGAGCAGAAGAAAATGTAAAATTGGGTTATTATGAAACGGTTTTCAAAGAAAACAATATTAAAACCG AAATAACGACTGGAGAAAAAGTTTCATTTTACAGAATAACCTATCCAAAAGATAAATCAAAAGAATTAAAAATTGACCCT GGATTTTTCCTTGGAGAAGAAAAGATTCCAGATGCCAGAGAAGCACAGCAGTTTGTAGGTTCTCAGATCGAAATAGTTTC AGATACCGAAGTAAGAGGTTACAGCCGAATCAGGGGAGGATGGAATAACGGACGCGCTTATACCGTTTATTTTTGGGCCG TTTTCGATCAGCCTATTGCTAAATATGTCACTTTTAAAGACGGCATGTTTTACAACAATCAAAAAGCACAGTTTGATTCA GGAAAGAAAACCGGAGCATTGCTTTCTTTTGGAAATTCAGGAAAAGAAGAATTAAATGTCAAAATAGGAATTTCATTTTT GAGTGAATTAAAAGCCAAAAATAATATAGAAATCGAAATCCCGCATTGGAATTTCAATACCGTTTTAGTCGCTTTAGAAA ATAAATGGGAAGATTTATTAAGCCGAATCAAATTATCGGATGATACCTCGGTAGAGTACAGAAAAATGTTCTACACAGGT TTGTACCACACGATGATTATGCCGGTTGACAGAACGGGCGAAAACCCATTATGGACCAATGATGAACCGTATTACGATGA TTTTTATACCATTTGGGACACCTTTAGAACCTCAAGTCCGTTAATCACTTTAATTGATAGTAAACGAAAAGTAGATATTA TCAACGCGATGCTGAATATCTACAAACGCGAAGGCTATATGCCCGAAGGAAGAAGCGGCAATGATAACGGACGAACTCAA GGCGGATCTAACGCTGAGGTTGTAATTGCCGATGCTTTTGTGAAAAATTTAAAAGGAATAGATTACGAACTGGCTTTACA GGCCATGATTAAAGATGCGACAGTGCCTCCCGGAGGAAATGAAGAAAGAGAAGGAAGAGGCGGACTGATAGATTATCTGA AATTAGGTTACGTTCCGTACGGCACAGACCGCGCAGGAAACCGAACAATAGATTATTCATACAACGATTATAACATTGCC ACAGTAGCCAAAGGTTTGGGTAAAACAGATTTGTACAATCAATACATCAAACAGGCCGAGAACTGGCAGAATTTATGGCG TGCCGATTATGAAAATAACGGTGCAAAAGGATTTATTATGCCAAAAGACAAAGATGGAAACTGGCTGGATGATGTCGTTT TCGGAGAATCCAAAATCCAAAAACCAACTTTTAAATATACGCCTGTCATTATCGAATCACCTTGGTATGTCTGTCATTGG TGCGTATTTTTCTACGAAGGAACTTCTTGGGAATATTCATTTAGTTTACCGCATGATATTCCGGAATTGGTAAAAAAATC AGGAGGAGAAAAAGCATTCGAAAAACGATTAGATATATTCTTCGATAATAATTTATTTAATGTTGCCAACGAACCTTCAT TTCTTACACCTTGTTTGTATCATTGGATTGGAAAACCCTATTTAAGCAGCGATAGAATCAGAACCATTATCAAGGATAAT TTCAATACATCGAGAGAAGGTCTTCCCGGAAATGATGATTCTGGAGCGATGTCTTCATGGCTGGCTTTTCATATGATGGG ATTATATCCAAATGCGGGACAGCCTTATTATCTAATCAATACGCCTTTAATTAAGGAAGTATTTGTAAAATTAGAGAATG GTAAAAGTTTTAAAATCACCACTAAAAAAATGAGTGATAAAAACAGATATATTAAAACTGCTTTGCTAAACGGAAAACCA TACAACAAAGCATGGATTTTACATGACGATATTAATAACGGAGGAGAACTGATTTTAGAAATGGATTCGAAACCTTCAGC TTGGGGAACAACAATTTTACCACCAGCAAAATAA
Upstream 100 bases:
>100_bases CAACAAACACGTAAAAGATTTTACACTAACCCATAAAGAGATTACAAACGGAGGAGAACTGATCCTGCAGATGTCAGCAA GAAAGTAAAATAAAGAAGCA
Downstream 100 bases:
>100_bases AAATGATGAGTAAGATGAAAAATATATTTTTAGTTATTCTTTTCTGTGCCATTTATCAAACAACAATCGCACAGAATTAT GTTCCGACATTGAAAAATAA
Product: putative alpha-1,2-mannosidase
Products: NA
Alternate protein names: Alpha-1 2-Mannosidase Family Protein; Glycoside Hydrolase Family; Sugar Hydrolase; Glycosyl Hydrolase Family; Secreted Protein; Glycoside Hydrolase Family Protein; Outer Membrane Protein; Immunoreactive; Glycosyl Hydrolase; Exported Alpha-1 2-Mannosidase; Antigen; Alpha-1 2-Mannosidase Protein; Lipoprotein
Number of amino acids: Translated: 757; Mature: 757
Protein sequence:
>757_residues MKIYSKNILLGISLLFAITSYAQKTVYQYVDPMIGSEGVGRVFIGPSCPYGMVKPSPDCTVSPNSGWLPMPKEVTGFSQV HVSGTGGGPKYGNISIMPFSGALDKMDQTSFRAEENVKLGYYETVFKENNIKTEITTGEKVSFYRITYPKDKSKELKIDP GFFLGEEKIPDAREAQQFVGSQIEIVSDTEVRGYSRIRGGWNNGRAYTVYFWAVFDQPIAKYVTFKDGMFYNNQKAQFDS GKKTGALLSFGNSGKEELNVKIGISFLSELKAKNNIEIEIPHWNFNTVLVALENKWEDLLSRIKLSDDTSVEYRKMFYTG LYHTMIMPVDRTGENPLWTNDEPYYDDFYTIWDTFRTSSPLITLIDSKRKVDIINAMLNIYKREGYMPEGRSGNDNGRTQ GGSNAEVVIADAFVKNLKGIDYELALQAMIKDATVPPGGNEEREGRGGLIDYLKLGYVPYGTDRAGNRTIDYSYNDYNIA TVAKGLGKTDLYNQYIKQAENWQNLWRADYENNGAKGFIMPKDKDGNWLDDVVFGESKIQKPTFKYTPVIIESPWYVCHW CVFFYEGTSWEYSFSLPHDIPELVKKSGGEKAFEKRLDIFFDNNLFNVANEPSFLTPCLYHWIGKPYLSSDRIRTIIKDN FNTSREGLPGNDDSGAMSSWLAFHMMGLYPNAGQPYYLINTPLIKEVFVKLENGKSFKITTKKMSDKNRYIKTALLNGKP YNKAWILHDDINNGGELILEMDSKPSAWGTTILPPAK
Sequences:
>Translated_757_residues MKIYSKNILLGISLLFAITSYAQKTVYQYVDPMIGSEGVGRVFIGPSCPYGMVKPSPDCTVSPNSGWLPMPKEVTGFSQV HVSGTGGGPKYGNISIMPFSGALDKMDQTSFRAEENVKLGYYETVFKENNIKTEITTGEKVSFYRITYPKDKSKELKIDP GFFLGEEKIPDAREAQQFVGSQIEIVSDTEVRGYSRIRGGWNNGRAYTVYFWAVFDQPIAKYVTFKDGMFYNNQKAQFDS GKKTGALLSFGNSGKEELNVKIGISFLSELKAKNNIEIEIPHWNFNTVLVALENKWEDLLSRIKLSDDTSVEYRKMFYTG LYHTMIMPVDRTGENPLWTNDEPYYDDFYTIWDTFRTSSPLITLIDSKRKVDIINAMLNIYKREGYMPEGRSGNDNGRTQ GGSNAEVVIADAFVKNLKGIDYELALQAMIKDATVPPGGNEEREGRGGLIDYLKLGYVPYGTDRAGNRTIDYSYNDYNIA TVAKGLGKTDLYNQYIKQAENWQNLWRADYENNGAKGFIMPKDKDGNWLDDVVFGESKIQKPTFKYTPVIIESPWYVCHW CVFFYEGTSWEYSFSLPHDIPELVKKSGGEKAFEKRLDIFFDNNLFNVANEPSFLTPCLYHWIGKPYLSSDRIRTIIKDN FNTSREGLPGNDDSGAMSSWLAFHMMGLYPNAGQPYYLINTPLIKEVFVKLENGKSFKITTKKMSDKNRYIKTALLNGKP YNKAWILHDDINNGGELILEMDSKPSAWGTTILPPAK >Mature_757_residues MKIYSKNILLGISLLFAITSYAQKTVYQYVDPMIGSEGVGRVFIGPSCPYGMVKPSPDCTVSPNSGWLPMPKEVTGFSQV HVSGTGGGPKYGNISIMPFSGALDKMDQTSFRAEENVKLGYYETVFKENNIKTEITTGEKVSFYRITYPKDKSKELKIDP GFFLGEEKIPDAREAQQFVGSQIEIVSDTEVRGYSRIRGGWNNGRAYTVYFWAVFDQPIAKYVTFKDGMFYNNQKAQFDS GKKTGALLSFGNSGKEELNVKIGISFLSELKAKNNIEIEIPHWNFNTVLVALENKWEDLLSRIKLSDDTSVEYRKMFYTG LYHTMIMPVDRTGENPLWTNDEPYYDDFYTIWDTFRTSSPLITLIDSKRKVDIINAMLNIYKREGYMPEGRSGNDNGRTQ GGSNAEVVIADAFVKNLKGIDYELALQAMIKDATVPPGGNEEREGRGGLIDYLKLGYVPYGTDRAGNRTIDYSYNDYNIA TVAKGLGKTDLYNQYIKQAENWQNLWRADYENNGAKGFIMPKDKDGNWLDDVVFGESKIQKPTFKYTPVIIESPWYVCHW CVFFYEGTSWEYSFSLPHDIPELVKKSGGEKAFEKRLDIFFDNNLFNVANEPSFLTPCLYHWIGKPYLSSDRIRTIIKDN FNTSREGLPGNDDSGAMSSWLAFHMMGLYPNAGQPYYLINTPLIKEVFVKLENGKSFKITTKKMSDKNRYIKTALLNGKP YNKAWILHDDINNGGELILEMDSKPSAWGTTILPPAK
Specific function: Unknown
COG id: COG3537
COG function: function code G; Putative alpha-1,2-mannosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85879; Mature: 85879
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIYSKNILLGISLLFAITSYAQKTVYQYVDPMIGSEGVGRVFIGPSCPYGMVKPSPDCT CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCE VSPNSGWLPMPKEVTGFSQVHVSGTGGGPKYGNISIMPFSGALDKMDQTSFRAEENVKLG ECCCCCCCCCCHHHCCCEEEEEEECCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCEEC YYETVFKENNIKTEITTGEKVSFYRITYPKDKSKELKIDPGFFLGEEKIPDAREAQQFVG EEEEEEECCCEEEEEECCCEEEEEEEECCCCCCCEEEECCCEEECCCCCCCHHHHHHHCC SQIEIVSDTEVRGYSRIRGGWNNGRAYTVYFWAVFDQPIAKYVTFKDGMFYNNQKAQFDS CEEEEEECCCCCCHHHHCCCCCCCCEEEEEEEEECCCCHHHHEEECCCEEECCCCCCCCC GKKTGALLSFGNSGKEELNVKIGISFLSELKAKNNIEIEIPHWNFNTVLVALENKWEDLL CCCCCEEEEECCCCCEEEEEEEEHHHHHHHHCCCCCEEEECCCCCCEEEEEECCHHHHHH SRIKLSDDTSVEYRKMFYTGLYHTMIMPVDRTGENPLWTNDEPYYDDFYTIWDTFRTSSP HHHCCCCCCCHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC LITLIDSKRKVDIINAMLNIYKREGYMPEGRSGNDNGRTQGGSNAEVVIADAFVKNLKGI EEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHCCC DYELALQAMIKDATVPPGGNEEREGRGGLIDYLKLGYVPYGTDRAGNRTIDYSYNDYNIA CHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCEECCCCCCCCEEEEECCCCCCHH TVAKGLGKTDLYNQYIKQAENWQNLWRADYENNGAKGFIMPKDKDGNWLDDVVFGESKIQ HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHCCCHHCC KPTFKYTPVIIESPWYVCHWCVFFYEGTSWEYSFSLPHDIPELVKKSGGEKAFEKRLDIF CCCEEECEEEEECCCHHEEEEEEEEECCCEEEEECCCCHHHHHHHHCCCHHHHHHCCCEE FDNNLFNVANEPSFLTPCLYHWIGKPYLSSDRIRTIIKDNFNTSREGLPGNDDSGAMSSW ECCCEEECCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHH LAFHMMGLYPNAGQPYYLINTPLIKEVFVKLENGKSFKITTKKMSDKNRYIKTALLNGKP HHHHHHHCCCCCCCCEEEECCCHHHHHHHEECCCCEEEEEECCCCCCCCEEEEEEECCCC YNKAWILHDDINNGGELILEMDSKPSAWGTTILPPAK CCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MKIYSKNILLGISLLFAITSYAQKTVYQYVDPMIGSEGVGRVFIGPSCPYGMVKPSPDCT CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCE VSPNSGWLPMPKEVTGFSQVHVSGTGGGPKYGNISIMPFSGALDKMDQTSFRAEENVKLG ECCCCCCCCCCHHHCCCEEEEEEECCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCEEC YYETVFKENNIKTEITTGEKVSFYRITYPKDKSKELKIDPGFFLGEEKIPDAREAQQFVG EEEEEEECCCEEEEEECCCEEEEEEEECCCCCCCEEEECCCEEECCCCCCCHHHHHHHCC SQIEIVSDTEVRGYSRIRGGWNNGRAYTVYFWAVFDQPIAKYVTFKDGMFYNNQKAQFDS CEEEEEECCCCCCHHHHCCCCCCCCEEEEEEEEECCCCHHHHEEECCCEEECCCCCCCCC GKKTGALLSFGNSGKEELNVKIGISFLSELKAKNNIEIEIPHWNFNTVLVALENKWEDLL CCCCCEEEEECCCCCEEEEEEEEHHHHHHHHCCCCCEEEECCCCCCEEEEEECCHHHHHH SRIKLSDDTSVEYRKMFYTGLYHTMIMPVDRTGENPLWTNDEPYYDDFYTIWDTFRTSSP HHHCCCCCCCHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC LITLIDSKRKVDIINAMLNIYKREGYMPEGRSGNDNGRTQGGSNAEVVIADAFVKNLKGI EEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHCCC DYELALQAMIKDATVPPGGNEEREGRGGLIDYLKLGYVPYGTDRAGNRTIDYSYNDYNIA CHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCEECCCCCCCCEEEEECCCCCCHH TVAKGLGKTDLYNQYIKQAENWQNLWRADYENNGAKGFIMPKDKDGNWLDDVVFGESKIQ HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHCCCHHCC KPTFKYTPVIIESPWYVCHWCVFFYEGTSWEYSFSLPHDIPELVKKSGGEKAFEKRLDIF CCCEEECEEEEECCCHHEEEEEEEEECCCEEEEECCCCHHHHHHHHCCCHHHHHHCCCEE FDNNLFNVANEPSFLTPCLYHWIGKPYLSSDRIRTIIKDNFNTSREGLPGNDDSGAMSSW ECCCEEECCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHH LAFHMMGLYPNAGQPYYLINTPLIKEVFVKLENGKSFKITTKKMSDKNRYIKTALLNGKP HHHHHHHCCCCCCCCEEEECCCHHHHHHHEECCCCEEEEEECCCCCCCCEEEEEEECCCC YNKAWILHDDINNGGELILEMDSKPSAWGTTILPPAK CCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA