Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146300870

Identifier: 146300870

GI number: 146300870

Start: 3708706

End: 3711012

Strand: Reverse

Name: 146300870

Synonym: Fjoh_3125

Alternate gene names: NA

Gene position: 3711012-3708706 (Counterclockwise)

Preceding gene: 146300871

Following gene: 146300869

Centisome position: 60.87

GC content: 36.41

Gene sequence:

>2307_bases
ATGGAATTAAAAAAAATCTATAAAATAGGACATATTGCAATAAGTCTAACACTTATTTTTTTAGTGTCATGCAGCGCCCA
GAAAAAACTTTCTCTGCAAAAGAAACAAATTTCAGATATGGTTTATCCGCTGCTGGACACCGAAAATTCAAGATGGTTTT
ACTTTTCATCAGCAAGCCGTCCTTTTGGTATGGTAAATTTAAATCCCGATACAGAAATTAAAGGAGATTGGGGAGGCGGT
TATAAATATACGACAGATACTGTCAAAGGTTTCAGCCACGTACACGAATGGCAGATGTCGGGTGTATCAGTAATGCCCGT
AACAATTTCGAAAGAAAATAAAGCGGCAATTTTTAAAGATTTTTATTCGAAATTCAGTCATAAAGCTGAAGTAATAACTC
CAGGATATCATTCACTAAAACTAGATCGATATCAGATTACAGCAGAATTAACGAGTACCAAAAGAGTTGGTTTTCATAAA
TATACATTTCCAGTTAAAGGACAAAAAGCCGTTCTCTTTAATCTGAATACCATTTTAGGGCCTTGCGAAAACACCAACGG
TAAATTAGAAAAAAACAACGATTATGAACTTTCAGGATCTTTAGTTTTAAGTACTAATTTCAGACGTCCAAAACCATTAA
CCGTATTTTTTAAAGTTAAAACAAGTGAGCCGATTTCTTCTGTTGAAAGAGACGATGCTACAGGAAATTATTTGATTCAT
TTTGATAAAACCAAAGAACAAGTATTAATGAAAGTCGGTATTTCTTATACCTCAATTGAGAATGCCAATAACAATATTGA
AACAGAATTACCGTATTGGGACTTCAATAAAACAACTGCCGATTCTCAAAAAGAATGGAGCAATTTGTTAGGAAGAATAA
AAATAGAAGGCGGAACAGAAACTGACCAAAGAAGATTTTACACTGATTTATGGCATGCTCTGCAGGGAAGAAAAATGATT
AGTGATGCAAATGGAGCCTATCCTGATAATACAGGGGACATATTCAGGATAGGACATTTGCCTTTAAAAGCAGACGGAAA
ACCAAAATTCAACCACTATAATTCAGATGCTTTTTGGGGAGCACAATGGACCATCAATAACCTTTGGGGATTGGTATATC
CTGAAATTATGGAAGAATTTGTGTATTCGCTGATGCAGTATTACAAAGACGGAGGAATAATCCCGCGCGGTCCTTCTGGA
GGAAATGATACGTATGTAATGACAGGAGCTTCGACAACCCCCTTTATTGTCAGCGCGATTCAAAAAGGAATTGTAAAAGA
AAATCTGGAAAAAATTTACATCGCACTTAAAAAAAATCATATGCCCGGCGGTATTATGGAAAAAGCCGGATATGAACACA
ATACCAATATTGGCGGAGGCTTAAAGTATTATTTAGAAAAAGGATATGTGCCGTATCCGCTTCCAGACGGCAATTTCGGA
AGCCACGAAGACGGTGCAAGCCAGACTTTGGAATATGCGTATCAGGATTGGACTTTGGCACAGCTCGCTAAAAAACTCAA
TCATGAAGAAGATTATCTATATTTCATGAAAAGAGCCAAAAACTATAAAAATGTTTTTGATGCTGAAATAGGCTGGATGC
GTCCGAAAAACGCAGACGGGAAATGGCGTGAAAATTACGATCCGTATCAATACGAAAACGGATTTATAGAATCAAACGGT
GCGCAGTCAACGTGGTTTGTACCGCATGATATTTTAGGTCTGGCTGATTTAATGGGAGGAAAAGAAAAAGCAGCGGCAAA
ATTAAATGCGCAATTTGAAACCGCTAAAAAACAAAATTATACTTCTGGCACATCGCACGATGCAGAATTGCACCCGGAGT
TTAGCAGAATTCCTGTAAATTTCGGAAATCAGCCGTCTATGCAGACTTCTAATATCTTCACCATTTTAGGAAGACCAGAT
TTAACACAGTATTGGACAAGAAATGTGGTAAAAGAAACCTTCAGCGGTTTATCGCCAGCAACAGGTTATAACGGAGATGA
AGATCAGGGATTAATGGGAAGCCTGAATGTCTTGTTGAAATTAGGTTTGTTTCAAATGAACGGAGGAACAGACCAAGACG
CTGTTTATCAAATAGGAAGTCCGATATTTAATAAGATTACGATAACATTAAATCCAAAATATTATTCAGGAAAAACATTT
GTAATTAATGCTCAGAAAAATAGTCCTGAAAATGTGTATATCAAAGACATAAAATACAACAACAAACACGTAAAAGATTT
TACACTAACCCATAAAGAGATTACAAACGGAGGAGAACTGATCCTGCAGATGTCAGCAAGAAAGTAA

Upstream 100 bases:

>100_bases
TTCTCACAGGAAATCCTTTGCCTTAGATTTTCGATTTAAAAAAAATCAAAACAAACAATCCTGCTCAAAATCACTATTGC
CCCATCAATACAAGAATTAA

Downstream 100 bases:

>100_bases
AATAAAGAAGCAATGAAAATATACAGTAAAAATATACTTTTAGGAATATCACTTTTGTTTGCGATAACTTCTTATGCCCA
AAAAACAGTTTACCAATATG

Product: putative alpha-1,2-mannosidase

Products: NA

Alternate protein names: Alpha-1 2-Mannosidase Family Protein; Glycoside Hydrolase Family; Glycosyl Hydrolase Family; Sugar Hydrolase; Glycoside Hydrolase Family Protein; Secreted Protein; Outer Membrane Protein; Immunoreactive; Exported Alpha-1 2-Mannosidase; Antigen; Alpha-1 2-Mannosidase Protein; Lipoprotein

Number of amino acids: Translated: 768; Mature: 768

Protein sequence:

>768_residues
MELKKIYKIGHIAISLTLIFLVSCSAQKKLSLQKKQISDMVYPLLDTENSRWFYFSSASRPFGMVNLNPDTEIKGDWGGG
YKYTTDTVKGFSHVHEWQMSGVSVMPVTISKENKAAIFKDFYSKFSHKAEVITPGYHSLKLDRYQITAELTSTKRVGFHK
YTFPVKGQKAVLFNLNTILGPCENTNGKLEKNNDYELSGSLVLSTNFRRPKPLTVFFKVKTSEPISSVERDDATGNYLIH
FDKTKEQVLMKVGISYTSIENANNNIETELPYWDFNKTTADSQKEWSNLLGRIKIEGGTETDQRRFYTDLWHALQGRKMI
SDANGAYPDNTGDIFRIGHLPLKADGKPKFNHYNSDAFWGAQWTINNLWGLVYPEIMEEFVYSLMQYYKDGGIIPRGPSG
GNDTYVMTGASTTPFIVSAIQKGIVKENLEKIYIALKKNHMPGGIMEKAGYEHNTNIGGGLKYYLEKGYVPYPLPDGNFG
SHEDGASQTLEYAYQDWTLAQLAKKLNHEEDYLYFMKRAKNYKNVFDAEIGWMRPKNADGKWRENYDPYQYENGFIESNG
AQSTWFVPHDILGLADLMGGKEKAAAKLNAQFETAKKQNYTSGTSHDAELHPEFSRIPVNFGNQPSMQTSNIFTILGRPD
LTQYWTRNVVKETFSGLSPATGYNGDEDQGLMGSLNVLLKLGLFQMNGGTDQDAVYQIGSPIFNKITITLNPKYYSGKTF
VINAQKNSPENVYIKDIKYNNKHVKDFTLTHKEITNGGELILQMSARK

Sequences:

>Translated_768_residues
MELKKIYKIGHIAISLTLIFLVSCSAQKKLSLQKKQISDMVYPLLDTENSRWFYFSSASRPFGMVNLNPDTEIKGDWGGG
YKYTTDTVKGFSHVHEWQMSGVSVMPVTISKENKAAIFKDFYSKFSHKAEVITPGYHSLKLDRYQITAELTSTKRVGFHK
YTFPVKGQKAVLFNLNTILGPCENTNGKLEKNNDYELSGSLVLSTNFRRPKPLTVFFKVKTSEPISSVERDDATGNYLIH
FDKTKEQVLMKVGISYTSIENANNNIETELPYWDFNKTTADSQKEWSNLLGRIKIEGGTETDQRRFYTDLWHALQGRKMI
SDANGAYPDNTGDIFRIGHLPLKADGKPKFNHYNSDAFWGAQWTINNLWGLVYPEIMEEFVYSLMQYYKDGGIIPRGPSG
GNDTYVMTGASTTPFIVSAIQKGIVKENLEKIYIALKKNHMPGGIMEKAGYEHNTNIGGGLKYYLEKGYVPYPLPDGNFG
SHEDGASQTLEYAYQDWTLAQLAKKLNHEEDYLYFMKRAKNYKNVFDAEIGWMRPKNADGKWRENYDPYQYENGFIESNG
AQSTWFVPHDILGLADLMGGKEKAAAKLNAQFETAKKQNYTSGTSHDAELHPEFSRIPVNFGNQPSMQTSNIFTILGRPD
LTQYWTRNVVKETFSGLSPATGYNGDEDQGLMGSLNVLLKLGLFQMNGGTDQDAVYQIGSPIFNKITITLNPKYYSGKTF
VINAQKNSPENVYIKDIKYNNKHVKDFTLTHKEITNGGELILQMSARK
>Mature_768_residues
MELKKIYKIGHIAISLTLIFLVSCSAQKKLSLQKKQISDMVYPLLDTENSRWFYFSSASRPFGMVNLNPDTEIKGDWGGG
YKYTTDTVKGFSHVHEWQMSGVSVMPVTISKENKAAIFKDFYSKFSHKAEVITPGYHSLKLDRYQITAELTSTKRVGFHK
YTFPVKGQKAVLFNLNTILGPCENTNGKLEKNNDYELSGSLVLSTNFRRPKPLTVFFKVKTSEPISSVERDDATGNYLIH
FDKTKEQVLMKVGISYTSIENANNNIETELPYWDFNKTTADSQKEWSNLLGRIKIEGGTETDQRRFYTDLWHALQGRKMI
SDANGAYPDNTGDIFRIGHLPLKADGKPKFNHYNSDAFWGAQWTINNLWGLVYPEIMEEFVYSLMQYYKDGGIIPRGPSG
GNDTYVMTGASTTPFIVSAIQKGIVKENLEKIYIALKKNHMPGGIMEKAGYEHNTNIGGGLKYYLEKGYVPYPLPDGNFG
SHEDGASQTLEYAYQDWTLAQLAKKLNHEEDYLYFMKRAKNYKNVFDAEIGWMRPKNADGKWRENYDPYQYENGFIESNG
AQSTWFVPHDILGLADLMGGKEKAAAKLNAQFETAKKQNYTSGTSHDAELHPEFSRIPVNFGNQPSMQTSNIFTILGRPD
LTQYWTRNVVKETFSGLSPATGYNGDEDQGLMGSLNVLLKLGLFQMNGGTDQDAVYQIGSPIFNKITITLNPKYYSGKTF
VINAQKNSPENVYIKDIKYNNKHVKDFTLTHKEITNGGELILQMSARK

Specific function: Unknown

COG id: COG3537

COG function: function code G; Putative alpha-1,2-mannosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 87004; Mature: 87004

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELKKIYKIGHIAISLTLIFLVSCSAQKKLSLQKKQISDMVYPLLDTENSRWFYFSSASR
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC
PFGMVNLNPDTEIKGDWGGGYKYTTDTVKGFSHVHEWQMSGVSVMPVTISKENKAAIFKD
CEEEEECCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHH
FYSKFSHKAEVITPGYHSLKLDRYQITAELTSTKRVGFHKYTFPVKGQKAVLFNLNTILG
HHHHHCCCCEEECCCCHHEEEEEEEEEEEECCCCCCCEEEEECCCCCCEEEEEEEHHHCC
PCENTNGKLEKNNDYELSGSLVLSTNFRRPKPLTVFFKVKTSEPISSVERDDATGNYLIH
CCCCCCCCEECCCCEEEECEEEEEECCCCCCCEEEEEEEECCCCHHHHHCCCCCCCEEEE
FDKTKEQVLMKVGISYTSIENANNNIETELPYWDFNKTTADSQKEWSNLLGRIKIEGGTE
ECCCHHHHHHHHCCCEEEECCCCCCCEECCCEECCCCCCCCHHHHHHHCCEEEEECCCCC
TDQRRFYTDLWHALQGRKMISDANGAYPDNTGDIFRIGHLPLKADGKPKFNHYNSDAFWG
HHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCEEEEECEEECCCCCCCCCCCCCCCEEE
AQWTINNLWGLVYPEIMEEFVYSLMQYYKDGGIIPRGPSGGNDTYVMTGASTTPFIVSAI
CEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCHHHHHHH
QKGIVKENLEKIYIALKKNHMPGGIMEKAGYEHNTNIGGGLKYYLEKGYVPYPLPDGNFG
HHHHHHHHHHHEEEEEECCCCCCCHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC
SHEDGASQTLEYAYQDWTLAQLAKKLNHEEDYLYFMKRAKNYKNVFDAEIGWMRPKNADG
CCCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCC
KWRENYDPYQYENGFIESNGAQSTWFVPHDILGLADLMGGKEKAAAKLNAQFETAKKQNY
CCCCCCCCCCCCCCEEECCCCCCEEECCHHHHHHHHHCCCCHHHHHHHCCHHHHHHHCCC
TSGTSHDAELHPEFSRIPVNFGNQPSMQTSNIFTILGRPDLTQYWTRNVVKETFSGLSPA
CCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCC
TGYNGDEDQGLMGSLNVLLKLGLFQMNGGTDQDAVYQIGSPIFNKITITLNPKYYSGKTF
CCCCCCCCCCHHHHHHHHHHHCEEEECCCCCHHHHHHHCCCCEEEEEEEECCCEECCEEE
VINAQKNSPENVYIKDIKYNNKHVKDFTLTHKEITNGGELILQMSARK
EEECCCCCCCEEEEEEEEECCCEEEEEEEEHHHHCCCCEEEEEEECCC
>Mature Secondary Structure
MELKKIYKIGHIAISLTLIFLVSCSAQKKLSLQKKQISDMVYPLLDTENSRWFYFSSASR
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC
PFGMVNLNPDTEIKGDWGGGYKYTTDTVKGFSHVHEWQMSGVSVMPVTISKENKAAIFKD
CEEEEECCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHH
FYSKFSHKAEVITPGYHSLKLDRYQITAELTSTKRVGFHKYTFPVKGQKAVLFNLNTILG
HHHHHCCCCEEECCCCHHEEEEEEEEEEEECCCCCCCEEEEECCCCCCEEEEEEEHHHCC
PCENTNGKLEKNNDYELSGSLVLSTNFRRPKPLTVFFKVKTSEPISSVERDDATGNYLIH
CCCCCCCCEECCCCEEEECEEEEEECCCCCCCEEEEEEEECCCCHHHHHCCCCCCCEEEE
FDKTKEQVLMKVGISYTSIENANNNIETELPYWDFNKTTADSQKEWSNLLGRIKIEGGTE
ECCCHHHHHHHHCCCEEEECCCCCCCEECCCEECCCCCCCCHHHHHHHCCEEEEECCCCC
TDQRRFYTDLWHALQGRKMISDANGAYPDNTGDIFRIGHLPLKADGKPKFNHYNSDAFWG
HHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCEEEEECEEECCCCCCCCCCCCCCCEEE
AQWTINNLWGLVYPEIMEEFVYSLMQYYKDGGIIPRGPSGGNDTYVMTGASTTPFIVSAI
CEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCHHHHHHH
QKGIVKENLEKIYIALKKNHMPGGIMEKAGYEHNTNIGGGLKYYLEKGYVPYPLPDGNFG
HHHHHHHHHHHEEEEEECCCCCCCHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC
SHEDGASQTLEYAYQDWTLAQLAKKLNHEEDYLYFMKRAKNYKNVFDAEIGWMRPKNADG
CCCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCC
KWRENYDPYQYENGFIESNGAQSTWFVPHDILGLADLMGGKEKAAAKLNAQFETAKKQNY
CCCCCCCCCCCCCCEEECCCCCCEEECCHHHHHHHHHCCCCHHHHHHHCCHHHHHHHCCC
TSGTSHDAELHPEFSRIPVNFGNQPSMQTSNIFTILGRPDLTQYWTRNVVKETFSGLSPA
CCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCC
TGYNGDEDQGLMGSLNVLLKLGLFQMNGGTDQDAVYQIGSPIFNKITITLNPKYYSGKTF
CCCCCCCCCCHHHHHHHHHHHCEEEECCCCCHHHHHHHCCCCEEEEEEEECCCEECCEEE
VINAQKNSPENVYIKDIKYNNKHVKDFTLTHKEITNGGELILQMSARK
EEECCCCCCCEEEEEEEEECCCEEEEEEEEHHHHCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA