Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
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Accession | NC_009441 |
Length | 6,096,872 |
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The map label for this gene is 146300839
Identifier: 146300839
GI number: 146300839
Start: 3662370
End: 3663086
Strand: Direct
Name: 146300839
Synonym: Fjoh_3094
Alternate gene names: NA
Gene position: 3662370-3663086 (Clockwise)
Preceding gene: 146300838
Following gene: 146300840
Centisome position: 60.07
GC content: 31.24
Gene sequence:
>717_bases ATGATAGTCAAAATACTTGCGAGTAAAAAAATCTTATTACTTTTTATTAATTTATGTGTATTTCAATTATACGCACAGCA AAAAAATAGCTTATCCCAACAGTTTCTAATGAATATTGAAATCAGACCAAGAGTCGAATATACTTCAAATTATTTTCTTC CTCCCAACGATTCAATTGATCCTTATTTTATTATTACCCAGAGAAACAGAATTTCTATGCAGTATGCTAGAGAAAAATGG CTTATTAAATCCGATTTACAGGAAATTCATCTTTGGGATGAAAACAGCAAAGCTTCCAAAGTTGGAAGCATTAATTTTTA TCAATTGTATTTTGAGACTAAGATTAAATCTCTAAATGTACGATTGGGAAGGCAAAGTGTTTTATTAGATAATGGCAGAT TATTTTCTGATGCTCCTTGGGCACAGCAAGGGAGAGCCCATGAAGGAATACGGATAATGAAATACTCAAAATATTTCTCT AATGATTTTTTCTTTTTGTTTACCAGAAACTACAGCACTGAATTTGAGTCAGCCTACTCTCCTGTTGCATCAAATAGGTA TAAATACCTGTTGATAAATAGTCTCAATTACAATAACAATCATGGATTTTCATTTAATTCATTGAATGCTGTTGATTTTT TAGAAAACTCAAGTTCAGGGAAATTGTATACTCGTGCAACAGCAGGCGGAAGAATAGAATTTAAAACGAAACAATAG
Upstream 100 bases:
>100_bases AGAACAAATTATAAATGCGGATTATCAAACGTAATTATAATATTGTAAATATGAATACTATTATTACTTTTATACACTAA TTCTATAGGATATTAGAAGT
Downstream 100 bases:
>100_bases TATTATACTTTAAATTCATATTGGCAGTTTGGACGTAATTCAAAAGGTCAAAAATTATTTACTTACTATTTTCAACCTGA AGTTAAATTATCTCTATTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MIVKILASKKILLLFINLCVFQLYAQQKNSLSQQFLMNIEIRPRVEYTSNYFLPPNDSIDPYFIITQRNRISMQYAREKW LIKSDLQEIHLWDENSKASKVGSINFYQLYFETKIKSLNVRLGRQSVLLDNGRLFSDAPWAQQGRAHEGIRIMKYSKYFS NDFFFLFTRNYSTEFESAYSPVASNRYKYLLINSLNYNNNHGFSFNSLNAVDFLENSSSGKLYTRATAGGRIEFKTKQ
Sequences:
>Translated_238_residues MIVKILASKKILLLFINLCVFQLYAQQKNSLSQQFLMNIEIRPRVEYTSNYFLPPNDSIDPYFIITQRNRISMQYAREKW LIKSDLQEIHLWDENSKASKVGSINFYQLYFETKIKSLNVRLGRQSVLLDNGRLFSDAPWAQQGRAHEGIRIMKYSKYFS NDFFFLFTRNYSTEFESAYSPVASNRYKYLLINSLNYNNNHGFSFNSLNAVDFLENSSSGKLYTRATAGGRIEFKTKQ >Mature_238_residues MIVKILASKKILLLFINLCVFQLYAQQKNSLSQQFLMNIEIRPRVEYTSNYFLPPNDSIDPYFIITQRNRISMQYAREKW LIKSDLQEIHLWDENSKASKVGSINFYQLYFETKIKSLNVRLGRQSVLLDNGRLFSDAPWAQQGRAHEGIRIMKYSKYFS NDFFFLFTRNYSTEFESAYSPVASNRYKYLLINSLNYNNNHGFSFNSLNAVDFLENSSSGKLYTRATAGGRIEFKTKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27947; Mature: 27947
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVKILASKKILLLFINLCVFQLYAQQKNSLSQQFLMNIEIRPRVEYTSNYFLPPNDSID CEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEECCCEEECCCCCCC PYFIITQRNRISMQYAREKWLIKSDLQEIHLWDENSKASKVGSINFYQLYFETKIKSLNV CEEEEEECCCEEEHHHHHHHHHHHCHHEEEEECCCCCCCEECCCEEEEEEEEEEEEEEEE RLGRQSVLLDNGRLFSDAPWAQQGRAHEGIRIMKYSKYFSNDFFFLFTRNYSTEFESAYS EECCEEEEEECCEEECCCCCHHCCCCCCCEEEEEEEHHHCCCEEEEEEECCCCCHHHHCC PVASNRYKYLLINSLNYNNNHGFSFNSLNAVDFLENSSSGKLYTRATAGGRIEFKTKQ CHHCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCEEEEEECC >Mature Secondary Structure MIVKILASKKILLLFINLCVFQLYAQQKNSLSQQFLMNIEIRPRVEYTSNYFLPPNDSID CEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEECCCEEECCCCCCC PYFIITQRNRISMQYAREKWLIKSDLQEIHLWDENSKASKVGSINFYQLYFETKIKSLNV CEEEEEECCCEEEHHHHHHHHHHHCHHEEEEECCCCCCCEECCCEEEEEEEEEEEEEEEE RLGRQSVLLDNGRLFSDAPWAQQGRAHEGIRIMKYSKYFSNDFFFLFTRNYSTEFESAYS EECCEEEEEECCEEECCCCCHHCCCCCCCEEEEEEEHHHCCCEEEEEEECCCCCHHHHCC PVASNRYKYLLINSLNYNNNHGFSFNSLNAVDFLENSSSGKLYTRATAGGRIEFKTKQ CHHCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA