Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
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Accession | NC_009441 |
Length | 6,096,872 |
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The map label for this gene is 146300840
Identifier: 146300840
GI number: 146300840
Start: 3663183
End: 3663674
Strand: Direct
Name: 146300840
Synonym: Fjoh_3095
Alternate gene names: NA
Gene position: 3663183-3663674 (Clockwise)
Preceding gene: 146300839
Following gene: 146300842
Centisome position: 60.08
GC content: 31.3
Gene sequence:
>492_bases TTGAAATCTACTTGGCGTTTAGGTGCAGAAATAATTAGTGGCAGCAGTCCTAATCTATCAGATAATAGTTCGGGAGATTT TGATGTCTTATATGGCGTGACATGGAAGTTCAATGGAAATATGAATGTCTTTACCCGTTTTCCCTCCGACGTTAACGGAA AAGGTTTAGTAAATCCTTATCTATTTACCGTAATTCCCTTAAATAGTAAACTATCTCTTCGTTCTGATTTTCACCTTTTT TATACTCGATACCCGCTTTTAAATAATTTGGGTCAAAAAATGACAAAGTTTCTTGGATATGAAAATGATTTTTCTTTGAA GTACTTACCTGTCAAAGAACTGGAAATTAATTATGCCTTTTCTTTTTATAAATCAACAAACGCAATGCAATATCTGCCAA AAATACAAGATGAAAATAAACTTGCTATTTGGAGCTACTTAATGATTTCATATTCTTTTAACGCGATCAATTTAAAGCAT TATAAAAATTAA
Upstream 100 bases:
>100_bases ATAGTATTATACTTTAAATTCATATTGGCAGTTTGGACGTAATTCAAAAGGTCAAAAATTATTTACTTACTATTTTCAAC CTGAAGTTAAATTATCTCTA
Downstream 100 bases:
>100_bases ATAAAATAATATCCTGTATTAAATCTTACACAATTAAAAAATCTAAAGTTTGTTTTATCTGAAAGGTTGAATTATATCAT CAACAAATTTTGATATTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MKSTWRLGAEIISGSSPNLSDNSSGDFDVLYGVTWKFNGNMNVFTRFPSDVNGKGLVNPYLFTVIPLNSKLSLRSDFHLF YTRYPLLNNLGQKMTKFLGYENDFSLKYLPVKELEINYAFSFYKSTNAMQYLPKIQDENKLAIWSYLMISYSFNAINLKH YKN
Sequences:
>Translated_163_residues MKSTWRLGAEIISGSSPNLSDNSSGDFDVLYGVTWKFNGNMNVFTRFPSDVNGKGLVNPYLFTVIPLNSKLSLRSDFHLF YTRYPLLNNLGQKMTKFLGYENDFSLKYLPVKELEINYAFSFYKSTNAMQYLPKIQDENKLAIWSYLMISYSFNAINLKH YKN >Mature_163_residues MKSTWRLGAEIISGSSPNLSDNSSGDFDVLYGVTWKFNGNMNVFTRFPSDVNGKGLVNPYLFTVIPLNSKLSLRSDFHLF YTRYPLLNNLGQKMTKFLGYENDFSLKYLPVKELEINYAFSFYKSTNAMQYLPKIQDENKLAIWSYLMISYSFNAINLKH YKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18897; Mature: 18897
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSTWRLGAEIISGSSPNLSDNSSGDFDVLYGVTWKFNGNMNVFTRFPSDVNGKGLVNPY CCCCHHCCHHEECCCCCCCCCCCCCCEEEEEEEEEEECCCEEEEEECCCCCCCCCCCCCE LFTVIPLNSKLSLRSDFHLFYTRYPLLNNLGQKMTKFLGYENDFSLKYLPVKELEINYAF EEEEEECCCCEECCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCEEEEEHHHEEEEEEE SFYKSTNAMQYLPKIQDENKLAIWSYLMISYSFNAINLKHYKN EEECCCCHHEECCCCCCCCCEEHEEEEEEEEECCEEEEEEECC >Mature Secondary Structure MKSTWRLGAEIISGSSPNLSDNSSGDFDVLYGVTWKFNGNMNVFTRFPSDVNGKGLVNPY CCCCHHCCHHEECCCCCCCCCCCCCCEEEEEEEEEEECCCEEEEEECCCCCCCCCCCCCE LFTVIPLNSKLSLRSDFHLFYTRYPLLNNLGQKMTKFLGYENDFSLKYLPVKELEINYAF EEEEEECCCCEECCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCEEEEEHHHEEEEEEE SFYKSTNAMQYLPKIQDENKLAIWSYLMISYSFNAINLKHYKN EEECCCCHHEECCCCCCCCCEEHEEEEEEEEECCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA