| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is pcoA [H]
Identifier: 146300823
GI number: 146300823
Start: 3647739
End: 3650354
Strand: Direct
Name: pcoA [H]
Synonym: Fjoh_3078
Alternate gene names: 146300823
Gene position: 3647739-3650354 (Clockwise)
Preceding gene: 146300822
Following gene: 146300824
Centisome position: 59.83
GC content: 40.25
Gene sequence:
>2616_bases ATGAAAAACATACTTATAATACTCGTATTTATCATGCTTCCTGTCCTGATTCAAGCCCAGGATATGAAAATGGCAATAGA TAAAAAGTCTGTCAAAGAAGAGTCGAATCCTGCTACCTATACTTGTCCAATGCATCCCGATATCCATGAATCCAAACCAG GAAAATGCCCAAAATGCGGCATGGCATTAGTGAAAGAAAAGTCTAAAATCACTAAGCCGAAGGCAGCTGCAAAACCTAAA ACTGTAACTGCTGTTAAAGAGGAAATGCCTAAAAAGGCTAAATCTTCCTCTGCGGATAAGATCAATATGCATCAGGCGCA TAATAAGACAAACATGGAAAAGAAAACAGCGAGCCCCCCAGTAAAAAAAATGATGGTAAATGATGAGCCACCTAAAGTTG TAAGGTACGATTTATATGTTCGCGATACGGTGGTAAATTTCTCAGGGAAATCAAAAAGAGCGATAGCGGTAAATGGCCAG ATACCAATGCCTACATTAACCTTTACAGAAGGTGATACCGCAGAAATTTATGTTCATAATGAACTTGACGAAGAAACGTC ATTACACTGGCATGGTTTGTTTCTACCCAATAAAGAAGACGGTGTGCCTAACCTTACCCAAATGCCGATAAAAGCACACA GTACCTACAAATATTCTTTTCCCATCAGGCAGCATGGGACCCATTGGTACCATAGCCATTCTGGTTTGCAGGAACAAATA GGAATGTACGGTTCTTTTGTGATGAACAAACGAAGCTCCGATCCAAACTTCAGGGCAGGGATAGATGACCTACCGACAAT TCCGATTGTGCTGAGCGAATGGACCGATATCGACCCGGAGAACGTTCATAGAATGCTGCATAATGCCTCCGATTGGTTTG CAATAAAAAAAGGCACGACCCAAAGTTATGGCGAAGCTATAAAACAAGGCTATTTAAAAACCAAGGTCCTCAATGAGTGG AAGCGTATGAACGCTATGGATGTAAGCGATGTCTATTATGAGAAATTTTTAATTAATGGGAAAAACGAAAGCCAGCTTTC GCAGTTCAAAGCCGGTGATAAGGTAAGATTACGCGTCTCTAATGGCGGTGCATCCAGTAATTTTTGGCTTACCTATGCCG GAGGCAAAATTACAGTAGTGGCCAGTGATGGTAATGATGTTGAGCCTGTTGAAGTAGACCGTCTACTTATTGCAGTTTCT GAAACTTATGACCTTGTTTTAAGCATTCCGGCAGAAAATACATCTTATGAGTTTTTGGCAACACCAGAAGACCGGACAAA ATCGGCGTCCCTCTACATTGGAAATGGCATCAAACAGCTCACCTCCCCTTTACCCAAACTGAAATACTTTGAAGGGATGC AAATGATGAACGATATGATGAAAATGAACGGAGACCTAAATGATATGGGGATGAAGATGTCGCTGAATCAGATGGATATG AACTCGGTAATGTATCCTGAAATTACAGGCCCACAAACAAAAGGAAGTAAAGACATGCCAATGGAGATGGACAAAGAAGA AACCAAATTGGATACCCCTGATAAAATGCACGACATGCACAATATGGAAAATAAGTACAATGCCAATGCTCTTGCCGATA TTGTGACATTAAATTATGCGATGCTAAAATCTCCAACAAGCACGGCATTGTCAAAAGATGCTCCAGTGAGGGAGCTCAAA TTCGAGCTTACCGGAAATATGAATCGCTATGTGTGGAGCCTGGATAACAAGGTCGTTTCCGAAGCTGATAAAATCCTGAT CAAGAAAGGAGAAATTTTACGTATCGTCCTGCATAATAATTCAATGATGCGCCATCCAATGCATTTGCATGGCCATGATT TCAGGGTCATCAATGGGCAAGGTGATTTTGCGCCTTTGAAAAATATCATCGACATCATGCCAATGGAAACAGATACTATT GAATTCGCCGCAAGCGAAGATGGCGGCGACTGGTTTTTCCACTGTCATATTCTCTACCATATGATGGCTGGTATGGGCAG AATTTTTTCTTATGAAAATTCACCTCCAAATCCAGAAATACCAAACCCTAAACTGGCTCAACGAAAATTGTTTGCTGACG ACAGAAAATTCCACTTTATGGCAGAAAATGATTTTGCCACCAATGGAAATGACGGTGAAGCAATGTATCAAAGTACACGC TGGAGCATTGGAACCGAATGGAGGTTAGGATACAATGACATGCATGGTTATGAAACAGAAACACATATTGGTCGATATAT TGGAAAAATGCAATGGTTAATGCCTTTTATAGGATTTGACTGGAGATATAGAAGAATGGGAGAAGATATACAAGAAAATA ATCTTTTTGGACAAACCAATACTAAGGATAAACGTGCAGTGGTAAGTCTAGGGGTTAACTACATCCTACCTATGTTAATA GTAGCACAAGCTGAAGTTTTTACCGATGGTAAAGTCAGATTACAATTTGAACGTAAAGACATTCCCGTTTCTAAACGGCT TAGAATGAATTTGATGTGGAATACAGACAAGGAATATATGGCAGGACTACGCTATATAATTACCAGATGGGGTTCTTTGT CTTCACACTATGACAGTGATATGGGCTTTGGTGCAGGATTTATTTTAAATTACTAG
Upstream 100 bases:
>100_bases GGACATTATAAAAGCACAACAAACTGAAATTGCACAGATGAAGGCCAAGTTAAATGAGATGGAAAAAAAATAATAGAACA CTATTCTTTAAAAAAGCAAT
Downstream 100 bases:
>100_bases CTTATAAGTACAATAGTAAATTATTGTAAGACCAAATTCTAGAATTAAGATTAATCGGTTAATATTGAAGGATATCAATT TTTTTAAATTGTCTTTCATT
Product: multicopper oxidase, type 3
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 871; Mature: 871
Protein sequence:
>871_residues MKNILIILVFIMLPVLIQAQDMKMAIDKKSVKEESNPATYTCPMHPDIHESKPGKCPKCGMALVKEKSKITKPKAAAKPK TVTAVKEEMPKKAKSSSADKINMHQAHNKTNMEKKTASPPVKKMMVNDEPPKVVRYDLYVRDTVVNFSGKSKRAIAVNGQ IPMPTLTFTEGDTAEIYVHNELDEETSLHWHGLFLPNKEDGVPNLTQMPIKAHSTYKYSFPIRQHGTHWYHSHSGLQEQI GMYGSFVMNKRSSDPNFRAGIDDLPTIPIVLSEWTDIDPENVHRMLHNASDWFAIKKGTTQSYGEAIKQGYLKTKVLNEW KRMNAMDVSDVYYEKFLINGKNESQLSQFKAGDKVRLRVSNGGASSNFWLTYAGGKITVVASDGNDVEPVEVDRLLIAVS ETYDLVLSIPAENTSYEFLATPEDRTKSASLYIGNGIKQLTSPLPKLKYFEGMQMMNDMMKMNGDLNDMGMKMSLNQMDM NSVMYPEITGPQTKGSKDMPMEMDKEETKLDTPDKMHDMHNMENKYNANALADIVTLNYAMLKSPTSTALSKDAPVRELK FELTGNMNRYVWSLDNKVVSEADKILIKKGEILRIVLHNNSMMRHPMHLHGHDFRVINGQGDFAPLKNIIDIMPMETDTI EFAASEDGGDWFFHCHILYHMMAGMGRIFSYENSPPNPEIPNPKLAQRKLFADDRKFHFMAENDFATNGNDGEAMYQSTR WSIGTEWRLGYNDMHGYETETHIGRYIGKMQWLMPFIGFDWRYRRMGEDIQENNLFGQTNTKDKRAVVSLGVNYILPMLI VAQAEVFTDGKVRLQFERKDIPVSKRLRMNLMWNTDKEYMAGLRYIITRWGSLSSHYDSDMGFGAGFILNY
Sequences:
>Translated_871_residues MKNILIILVFIMLPVLIQAQDMKMAIDKKSVKEESNPATYTCPMHPDIHESKPGKCPKCGMALVKEKSKITKPKAAAKPK TVTAVKEEMPKKAKSSSADKINMHQAHNKTNMEKKTASPPVKKMMVNDEPPKVVRYDLYVRDTVVNFSGKSKRAIAVNGQ IPMPTLTFTEGDTAEIYVHNELDEETSLHWHGLFLPNKEDGVPNLTQMPIKAHSTYKYSFPIRQHGTHWYHSHSGLQEQI GMYGSFVMNKRSSDPNFRAGIDDLPTIPIVLSEWTDIDPENVHRMLHNASDWFAIKKGTTQSYGEAIKQGYLKTKVLNEW KRMNAMDVSDVYYEKFLINGKNESQLSQFKAGDKVRLRVSNGGASSNFWLTYAGGKITVVASDGNDVEPVEVDRLLIAVS ETYDLVLSIPAENTSYEFLATPEDRTKSASLYIGNGIKQLTSPLPKLKYFEGMQMMNDMMKMNGDLNDMGMKMSLNQMDM NSVMYPEITGPQTKGSKDMPMEMDKEETKLDTPDKMHDMHNMENKYNANALADIVTLNYAMLKSPTSTALSKDAPVRELK FELTGNMNRYVWSLDNKVVSEADKILIKKGEILRIVLHNNSMMRHPMHLHGHDFRVINGQGDFAPLKNIIDIMPMETDTI EFAASEDGGDWFFHCHILYHMMAGMGRIFSYENSPPNPEIPNPKLAQRKLFADDRKFHFMAENDFATNGNDGEAMYQSTR WSIGTEWRLGYNDMHGYETETHIGRYIGKMQWLMPFIGFDWRYRRMGEDIQENNLFGQTNTKDKRAVVSLGVNYILPMLI VAQAEVFTDGKVRLQFERKDIPVSKRLRMNLMWNTDKEYMAGLRYIITRWGSLSSHYDSDMGFGAGFILNY >Mature_871_residues MKNILIILVFIMLPVLIQAQDMKMAIDKKSVKEESNPATYTCPMHPDIHESKPGKCPKCGMALVKEKSKITKPKAAAKPK TVTAVKEEMPKKAKSSSADKINMHQAHNKTNMEKKTASPPVKKMMVNDEPPKVVRYDLYVRDTVVNFSGKSKRAIAVNGQ IPMPTLTFTEGDTAEIYVHNELDEETSLHWHGLFLPNKEDGVPNLTQMPIKAHSTYKYSFPIRQHGTHWYHSHSGLQEQI GMYGSFVMNKRSSDPNFRAGIDDLPTIPIVLSEWTDIDPENVHRMLHNASDWFAIKKGTTQSYGEAIKQGYLKTKVLNEW KRMNAMDVSDVYYEKFLINGKNESQLSQFKAGDKVRLRVSNGGASSNFWLTYAGGKITVVASDGNDVEPVEVDRLLIAVS ETYDLVLSIPAENTSYEFLATPEDRTKSASLYIGNGIKQLTSPLPKLKYFEGMQMMNDMMKMNGDLNDMGMKMSLNQMDM NSVMYPEITGPQTKGSKDMPMEMDKEETKLDTPDKMHDMHNMENKYNANALADIVTLNYAMLKSPTSTALSKDAPVRELK FELTGNMNRYVWSLDNKVVSEADKILIKKGEILRIVLHNNSMMRHPMHLHGHDFRVINGQGDFAPLKNIIDIMPMETDTI EFAASEDGGDWFFHCHILYHMMAGMGRIFSYENSPPNPEIPNPKLAQRKLFADDRKFHFMAENDFATNGNDGEAMYQSTR WSIGTEWRLGYNDMHGYETETHIGRYIGKMQWLMPFIGFDWRYRRMGEDIQENNLFGQTNTKDKRAVVSLGVNYILPMLI VAQAEVFTDGKVRLQFERKDIPVSKRLRMNLMWNTDKEYMAGLRYIITRWGSLSSHYDSDMGFGAGFILNY
Specific function: Required for the copper-inducible expression of copper resistance. May have oxidase activity [H]
COG id: COG2132
COG function: function code Q; Putative multicopper oxidases
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the multicopper oxidase family. CopA subfamily [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6323703, Length=555, Percent_Identity=25.2252252252252, Blast_Score=105, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6320714, Length=298, Percent_Identity=25.8389261744966, Blast_Score=79, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6321067, Length=107, Percent_Identity=42.0560747663551, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI28574104, Length=616, Percent_Identity=22.8896103896104, Blast_Score=120, Evalue=5e-27, Organism=Drosophila melanogaster, GI221330000, Length=584, Percent_Identity=25, Blast_Score=113, Evalue=7e-25, Organism=Drosophila melanogaster, GI18859919, Length=273, Percent_Identity=28.9377289377289, Blast_Score=105, Evalue=1e-22, Organism=Drosophila melanogaster, GI24650186, Length=303, Percent_Identity=25.0825082508251, Blast_Score=104, Evalue=3e-22, Organism=Drosophila melanogaster, GI281360167, Length=265, Percent_Identity=29.0566037735849, Blast_Score=99, Evalue=2e-20, Organism=Drosophila melanogaster, GI24585842, Length=265, Percent_Identity=29.0566037735849, Blast_Score=99, Evalue=2e-20, Organism=Drosophila melanogaster, GI221329998, Length=265, Percent_Identity=29.0566037735849, Blast_Score=99, Evalue=2e-20,
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001117 - InterPro: IPR011706 - InterPro: IPR011707 - InterPro: IPR006376 - InterPro: IPR002355 - InterPro: IPR008972 - InterPro: IPR006311 [H]
Pfam domain/function: PF00394 Cu-oxidase; PF07731 Cu-oxidase_2; PF07732 Cu-oxidase_3 [H]
EC number: NA
Molecular weight: Translated: 99289; Mature: 99289
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: PS00079 MULTICOPPER_OXIDASE1 ; PS00080 MULTICOPPER_OXIDASE2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 6.5 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNILIILVFIMLPVLIQAQDMKMAIDKKSVKEESNPATYTCPMHPDIHESKPGKCPKCG CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCHHH MALVKEKSKITKPKAAAKPKTVTAVKEEMPKKAKSSSADKINMHQAHNKTNMEKKTASPP HHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHCCCCCEEEHHHHCCCCCCCHHCCCCC VKKMMVNDEPPKVVRYDLYVRDTVVNFSGKSKRAIAVNGQIPMPTLTFTEGDTAEIYVHN HHHHCCCCCCCCEEEEEEEEEEEEEECCCCCCEEEEECCCCCCCEEEECCCCEEEEEEEC ELDEETSLHWHGLFLPNKEDGVPNLTQMPIKAHSTYKYSFPIRQHGTHWYHSHSGLQEQI CCCCCCCEEEEEEECCCCCCCCCCCEECCEEECCEEEEECCHHHCCCEEEECCCCHHHHH GMYGSFVMNKRSSDPNFRAGIDDLPTIPIVLSEWTDIDPENVHRMLHNASDWFAIKKGTT HHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCEEEEECCCC QSYGEAIKQGYLKTKVLNEWKRMNAMDVSDVYYEKFLINGKNESQLSQFKAGDKVRLRVS HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEECCCCHHHHHHHCCCCEEEEEEE NGGASSNFWLTYAGGKITVVASDGNDVEPVEVDRLLIAVSETYDLVLSIPAENTSYEFLA CCCCCCCEEEEEECCEEEEEECCCCCCCCEEECEEEEEEECCEEEEEECCCCCCCEEEEE TPEDRTKSASLYIGNGIKQLTSPLPKLKYFEGMQMMNDMMKMNGDLNDMGMKMSLNQMDM CCCCCCCCEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCC NSVMYPEITGPQTKGSKDMPMEMDKEETKLDTPDKMHDMHNMENKYNANALADIVTLNYA CCEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHH MLKSPTSTALSKDAPVRELKFELTGNMNRYVWSLDNKVVSEADKILIKKGEILRIVLHNN HHCCCCHHHHCCCCCHHHEEEEECCCCCEEEEECCHHHHHHHHHEEEECCCEEEEEEECC SMMRHPMHLHGHDFRVINGQGDFAPLKNIIDIMPMETDTIEFAASEDGGDWFFHCHILYH CHHCCCCEECCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEHHHHHHH MMAGMGRIFSYENSPPNPEIPNPKLAQRKLFADDRKFHFMAENDFATNGNDGEAMYQSTR HHHCCHHEEECCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHCC WSIGTEWRLGYNDMHGYETETHIGRYIGKMQWLMPFIGFDWRYRRMGEDIQENNLFGQTN CCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHCCCCCCCC TKDKRAVVSLGVNYILPMLIVAQAEVFTDGKVRLQFERKDIPVSKRLRMNLMWNTDKEYM CCCHHHHHHHCHHHHHHHHHHHHHHEECCCEEEEEEECCCCCCCCCEEEEEEECCCHHHH AGLRYIITRWGSLSSHYDSDMGFGAGFILNY HHHHHHHHHCCCCCCCCCCCCCCCCEEEECC >Mature Secondary Structure MKNILIILVFIMLPVLIQAQDMKMAIDKKSVKEESNPATYTCPMHPDIHESKPGKCPKCG CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCHHH MALVKEKSKITKPKAAAKPKTVTAVKEEMPKKAKSSSADKINMHQAHNKTNMEKKTASPP HHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHCCCCCEEEHHHHCCCCCCCHHCCCCC VKKMMVNDEPPKVVRYDLYVRDTVVNFSGKSKRAIAVNGQIPMPTLTFTEGDTAEIYVHN HHHHCCCCCCCCEEEEEEEEEEEEEECCCCCCEEEEECCCCCCCEEEECCCCEEEEEEEC ELDEETSLHWHGLFLPNKEDGVPNLTQMPIKAHSTYKYSFPIRQHGTHWYHSHSGLQEQI CCCCCCCEEEEEEECCCCCCCCCCCEECCEEECCEEEEECCHHHCCCEEEECCCCHHHHH GMYGSFVMNKRSSDPNFRAGIDDLPTIPIVLSEWTDIDPENVHRMLHNASDWFAIKKGTT HHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCEEEEECCCC QSYGEAIKQGYLKTKVLNEWKRMNAMDVSDVYYEKFLINGKNESQLSQFKAGDKVRLRVS HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEECCCCHHHHHHHCCCCEEEEEEE NGGASSNFWLTYAGGKITVVASDGNDVEPVEVDRLLIAVSETYDLVLSIPAENTSYEFLA CCCCCCCEEEEEECCEEEEEECCCCCCCCEEECEEEEEEECCEEEEEECCCCCCCEEEEE TPEDRTKSASLYIGNGIKQLTSPLPKLKYFEGMQMMNDMMKMNGDLNDMGMKMSLNQMDM CCCCCCCCEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCC NSVMYPEITGPQTKGSKDMPMEMDKEETKLDTPDKMHDMHNMENKYNANALADIVTLNYA CCEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHH MLKSPTSTALSKDAPVRELKFELTGNMNRYVWSLDNKVVSEADKILIKKGEILRIVLHNN HHCCCCHHHHCCCCCHHHEEEEECCCCCEEEEECCHHHHHHHHHEEEECCCEEEEEEECC SMMRHPMHLHGHDFRVINGQGDFAPLKNIIDIMPMETDTIEFAASEDGGDWFFHCHILYH CHHCCCCEECCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEHHHHHHH MMAGMGRIFSYENSPPNPEIPNPKLAQRKLFADDRKFHFMAENDFATNGNDGEAMYQSTR HHHCCHHEEECCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHCC WSIGTEWRLGYNDMHGYETETHIGRYIGKMQWLMPFIGFDWRYRRMGEDIQENNLFGQTN CCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHCCCCCCCC TKDKRAVVSLGVNYILPMLIVAQAEVFTDGKVRLQFERKDIPVSKRLRMNLMWNTDKEYM CCCHHHHHHHCHHHHHHHHHHHHHHEECCCEEEEEEECCCCCCCCCEEEEEEECCCHHHH AGLRYIITRWGSLSSHYDSDMGFGAGFILNY HHHHHHHHHCCCCCCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8594334 [H]