| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is 146300822
Identifier: 146300822
GI number: 146300822
Start: 3647217
End: 3647711
Strand: Direct
Name: 146300822
Synonym: Fjoh_3077
Alternate gene names: NA
Gene position: 3647217-3647711 (Clockwise)
Preceding gene: 146300821
Following gene: 146300823
Centisome position: 59.82
GC content: 34.34
Gene sequence:
>495_bases ATGAAAATGGAACACGCAACACAGCAGTATTCAAAAGAGGTAGACTCCAAAATGTACAAAAAATTAGCCATTATGATCGT ATTGTCATTTATTTCTATGTACATATTGATGTATTCGATGGTCGATATTTTTGCTAATGTCATTCCCAATGTAAACCAAT TTTACATGGCAGGACTAATGACTATGCCAATGCTCGTAATTGAAATTATTGTTATGGGTCGTATGTATATTAATAAAAAA TGGAACATAATGTTACTTATAACAGGCAGCCTTATCGCGATCATTTTTTTTTCCTGTATAAGAGAGCAAGCAGCTGTTGG AGATAAACAATTTTTAAAATCAATGATACCGCACCATGCAGCAGCAATACTAATGGCTCAGAAGGCTTCTCTTCACGATC CTGAAATAAGCCAGCTTGCCAAGGACATTATAAAAGCACAACAAACTGAAATTGCACAGATGAAGGCCAAGTTAAATGAG ATGGAAAAAAAATAA
Upstream 100 bases:
>100_bases AAAAATCCTTGCCATTTAAACCGATCCAGTGTTATAGTAGCATTAGACTTGTTTTGTTCAGGGAAATAGATAAATCTAAA TAACTTTTAAAGCTAAAAAT
Downstream 100 bases:
>100_bases TAGAACACTATTCTTTAAAAAAGCAATATGAAAAACATACTTATAATACTCGTATTTATCATGCTTCCTGTCCTGATTCA AGCCCAGGATATGAAAATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MKMEHATQQYSKEVDSKMYKKLAIMIVLSFISMYILMYSMVDIFANVIPNVNQFYMAGLMTMPMLVIEIIVMGRMYINKK WNIMLLITGSLIAIIFFSCIREQAAVGDKQFLKSMIPHHAAAILMAQKASLHDPEISQLAKDIIKAQQTEIAQMKAKLNE MEKK
Sequences:
>Translated_164_residues MKMEHATQQYSKEVDSKMYKKLAIMIVLSFISMYILMYSMVDIFANVIPNVNQFYMAGLMTMPMLVIEIIVMGRMYINKK WNIMLLITGSLIAIIFFSCIREQAAVGDKQFLKSMIPHHAAAILMAQKASLHDPEISQLAKDIIKAQQTEIAQMKAKLNE MEKK >Mature_164_residues MKMEHATQQYSKEVDSKMYKKLAIMIVLSFISMYILMYSMVDIFANVIPNVNQFYMAGLMTMPMLVIEIIVMGRMYINKK WNIMLLITGSLIAIIFFSCIREQAAVGDKQFLKSMIPHHAAAILMAQKASLHDPEISQLAKDIIKAQQTEIAQMKAKLNE MEKK
Specific function: Unknown
COG id: COG3544
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18800; Mature: 18800
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 11.0 %Met (Translated Protein) 11.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 11.0 %Met (Mature Protein) 11.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMEHATQQYSKEVDSKMYKKLAIMIVLSFISMYILMYSMVDIFANVIPNVNQFYMAGLM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH TMPMLVIEIIVMGRMYINKKWNIMLLITGSLIAIIFFSCIREQAAVGDKQFLKSMIPHHA HHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH AAILMAQKASLHDPEISQLAKDIIKAQQTEIAQMKAKLNEMEKK HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKMEHATQQYSKEVDSKMYKKLAIMIVLSFISMYILMYSMVDIFANVIPNVNQFYMAGLM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH TMPMLVIEIIVMGRMYINKKWNIMLLITGSLIAIIFFSCIREQAAVGDKQFLKSMIPHHA HHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH AAILMAQKASLHDPEISQLAKDIIKAQQTEIAQMKAKLNEMEKK HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA