| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300780
Identifier: 146300780
GI number: 146300780
Start: 3585206
End: 3585952
Strand: Reverse
Name: 146300780
Synonym: Fjoh_3031
Alternate gene names: NA
Gene position: 3585952-3585206 (Counterclockwise)
Preceding gene: 146300781
Following gene: 146300779
Centisome position: 58.82
GC content: 37.22
Gene sequence:
>747_bases ATGACGAAATCAGATAAAGAGATTGCAGATTACCTCGGTAAAAACGGCCAAATTTTCTGCGAGGAGTTACATGACCGCAG CCATCATTTTTTTCGGACTCTTCCCCATAGCTATTTTGCAATTGCCTGTGCAATTTCATTAAGCTGGACCGGACATGCAA AATATGATGATGATTTTATTTTTTATGCGTCAGCATATATTGATGCTGCAATAGCAAAAGATCCAAAAATTGCAAAATTA TACAGTCTAAGGTTTGGAGAAGAAGGATTGGATACTGCGCTTACAAATTTTAGAATTTATCTAAACAGGGTAAAGAACCT AATGCCGGATTTCAATGTTTGTTCAATCCAAGATATCAATGTTCTGCAGCAAAGGCTTCTAAATAAATTAACTGTGTTTA GAGATAATGGAGAAGTTATTGGGATAGGCCCATGGCTTTTTTTAGGTGCTTTTAAAATTATTTTGGAAGATCAGAAGCGG TTTTGGCAAAATGATGGAATCGATGCTATTGTCATGCCGACTGGATTGGAGGTAGATAGAGGCATTGTGCGTTTAAAAAA CGAGGGCTTTTCCTTCATGAAGGATTTCGACCTGCATTGGCTGGAAGAAAATAAGGGGACACTTTCTGATAATTACGCCA CGTGCATTATGGTTCATTCGCATATTGTGAAAATTGCGAAAATCAGCGGAACAACCGCTTTACAAATTAATAGTGCTTTG TATAAATACGGAAGAAAGGAATTGTAA
Upstream 100 bases:
>100_bases TGAAAATAGAATCTGTACTACCATTAAGGATGTTTTCTATGATTTACTAGAACAGGCCAAAAAAATAGGATAAATTTTCG TAATTAAGTGAATTAGAAAA
Downstream 100 bases:
>100_bases AATTAAATTATAAAACTGTTAAATAATGGAGCCACTTATTTATTATCCGACTTTTGAGCCGCCAACTGATGCTTGGCTTA AATTTTCATTATTATATTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MTKSDKEIADYLGKNGQIFCEELHDRSHHFFRTLPHSYFAIACAISLSWTGHAKYDDDFIFYASAYIDAAIAKDPKIAKL YSLRFGEEGLDTALTNFRIYLNRVKNLMPDFNVCSIQDINVLQQRLLNKLTVFRDNGEVIGIGPWLFLGAFKIILEDQKR FWQNDGIDAIVMPTGLEVDRGIVRLKNEGFSFMKDFDLHWLEENKGTLSDNYATCIMVHSHIVKIAKISGTTALQINSAL YKYGRKEL
Sequences:
>Translated_248_residues MTKSDKEIADYLGKNGQIFCEELHDRSHHFFRTLPHSYFAIACAISLSWTGHAKYDDDFIFYASAYIDAAIAKDPKIAKL YSLRFGEEGLDTALTNFRIYLNRVKNLMPDFNVCSIQDINVLQQRLLNKLTVFRDNGEVIGIGPWLFLGAFKIILEDQKR FWQNDGIDAIVMPTGLEVDRGIVRLKNEGFSFMKDFDLHWLEENKGTLSDNYATCIMVHSHIVKIAKISGTTALQINSAL YKYGRKEL >Mature_247_residues TKSDKEIADYLGKNGQIFCEELHDRSHHFFRTLPHSYFAIACAISLSWTGHAKYDDDFIFYASAYIDAAIAKDPKIAKLY SLRFGEEGLDTALTNFRIYLNRVKNLMPDFNVCSIQDINVLQQRLLNKLTVFRDNGEVIGIGPWLFLGAFKIILEDQKRF WQNDGIDAIVMPTGLEVDRGIVRLKNEGFSFMKDFDLHWLEENKGTLSDNYATCIMVHSHIVKIAKISGTTALQINSALY KYGRKEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28402; Mature: 28271
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKSDKEIADYLGKNGQIFCEELHDRSHHFFRTLPHSYFAIACAISLSWTGHAKYDDDFI CCCCHHHHHHHHCCCCCEEHHHHHCCHHHHHHHCCHHHEEEEEEEEEEECCCCCCCCCEE FYASAYIDAAIAKDPKIAKLYSLRFGEEGLDTALTNFRIYLNRVKNLMPDFNVCSIQDIN EEEHHHHHHHHCCCCCHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHH VLQQRLLNKLTVFRDNGEVIGIGPWLFLGAFKIILEDQKRFWQNDGIDAIVMPTGLEVDR HHHHHHHHHHEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC GIVRLKNEGFSFMKDFDLHWLEENKGTLSDNYATCIMVHSHIVKIAKISGTTALQINSAL CEEEEECCCCCHHHHCCCEEEECCCCCCCCCCEEEEEEHHHHHHHEEECCCEEEEEHHHH YKYGRKEL HHCCCCCC >Mature Secondary Structure TKSDKEIADYLGKNGQIFCEELHDRSHHFFRTLPHSYFAIACAISLSWTGHAKYDDDFI CCCHHHHHHHHCCCCCEEHHHHHCCHHHHHHHCCHHHEEEEEEEEEEECCCCCCCCCEE FYASAYIDAAIAKDPKIAKLYSLRFGEEGLDTALTNFRIYLNRVKNLMPDFNVCSIQDIN EEEHHHHHHHHCCCCCHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHH VLQQRLLNKLTVFRDNGEVIGIGPWLFLGAFKIILEDQKRFWQNDGIDAIVMPTGLEVDR HHHHHHHHHHEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC GIVRLKNEGFSFMKDFDLHWLEENKGTLSDNYATCIMVHSHIVKIAKISGTTALQINSAL CEEEEECCCCCHHHHCCCEEEECCCCCCCCCCEEEEEEHHHHHHHEEECCCEEEEEHHHH YKYGRKEL HHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA