| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300779
Identifier: 146300779
GI number: 146300779
Start: 3584197
End: 3585180
Strand: Reverse
Name: 146300779
Synonym: Fjoh_3030
Alternate gene names: NA
Gene position: 3585180-3584197 (Counterclockwise)
Preceding gene: 146300780
Following gene: 146300778
Centisome position: 58.8
GC content: 39.84
Gene sequence:
>984_bases ATGGAGCCACTTATTTATTATCCGACTTTTGAGCCGCCAACTGATGCTTGGCTTAAATTTTCATTATTATATTTCGAAAA TTTCAGGCCTATTATTCCTTACAGCCGCCGCAGACTGGTTAGTGACAATTATACAAGGATAATAGAGAATACGGATTTAA TAAGACCGTACAGCCCTGGAGCGGATGTGGGATACAGAGCCTCGCTGAAAGCCATCGAAGAAGTAGATAAAATCTTTGAC CGCACGCACGATAGAAGTCTTTTATTCAATAGTGCAAACTTGATCAGAAAGTGGGAAAATAGTGCTAATTGGAATTTTAA TGTTTACCATGAAAAATTCTCAGACATATGGGCGGATTATTGTGAGCGAAACAATATTGGACGCAGAACCGAGAACGGCA TAATGCTGCCTGAGGAGCTGGCGTTTCTATTTATGACCTATCTGGCAAAGGAAATTGCATTTGAGGAATCTGCAGCGATA ATAACCGACAATAACAAATACGACAATTTTACCAATTACTCCCGTTCTACAACTCCGAGCTTGAACAGGACGACCAAATT TGCCAAAGGAATCATCAATCTTCTTATTCCTAAAAATTTGGCAGATATACCCTTTGAAAGGCTGATTGAGTTTCGTGAAA ATAATAGGGATTATTTAAGGGCATTCAACTCAGAACTTCAAAATATCCAAGAGAAAATAGGTGAGGGCTATAGCGAGCAG GACTTTATAAACAGCTACAACAATATTTATTCCGAGTTCAGCAGGCAGGTGGTCTTGACAGGGATAGGATTGGCTTCAAT ACCGTTTGCCGCTTATATGCTTATTAAAAACCCAGCGGCAACCGCTCCGGAATATGTGAAGGAAATATTGGGAGCATTAG GTATTGCACTTGGCGGAGGGTACACACTAAATAAAGGACTGCGTGATAACGAGACAGGAAGATACTGCAAAAAATATATA ACCAATCTGGAAAGGATAAGATAA
Upstream 100 bases:
>100_bases ATTGCGAAAATCAGCGGAACAACCGCTTTACAAATTAATAGTGCTTTGTATAAATACGGAAGAAAGGAATTGTAAAATTA AATTATAAAACTGTTAAATA
Downstream 100 bases:
>100_bases TAAACAGATTTTATAACCATAGAAGAATAAGACCAACAATGATTATTAATAACCTCACAAGGCAAAATCATTTGCATCAT GTAAAGCAAATTTTTCAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MEPLIYYPTFEPPTDAWLKFSLLYFENFRPIIPYSRRRLVSDNYTRIIENTDLIRPYSPGADVGYRASLKAIEEVDKIFD RTHDRSLLFNSANLIRKWENSANWNFNVYHEKFSDIWADYCERNNIGRRTENGIMLPEELAFLFMTYLAKEIAFEESAAI ITDNNKYDNFTNYSRSTTPSLNRTTKFAKGIINLLIPKNLADIPFERLIEFRENNRDYLRAFNSELQNIQEKIGEGYSEQ DFINSYNNIYSEFSRQVVLTGIGLASIPFAAYMLIKNPAATAPEYVKEILGALGIALGGGYTLNKGLRDNETGRYCKKYI TNLERIR
Sequences:
>Translated_327_residues MEPLIYYPTFEPPTDAWLKFSLLYFENFRPIIPYSRRRLVSDNYTRIIENTDLIRPYSPGADVGYRASLKAIEEVDKIFD RTHDRSLLFNSANLIRKWENSANWNFNVYHEKFSDIWADYCERNNIGRRTENGIMLPEELAFLFMTYLAKEIAFEESAAI ITDNNKYDNFTNYSRSTTPSLNRTTKFAKGIINLLIPKNLADIPFERLIEFRENNRDYLRAFNSELQNIQEKIGEGYSEQ DFINSYNNIYSEFSRQVVLTGIGLASIPFAAYMLIKNPAATAPEYVKEILGALGIALGGGYTLNKGLRDNETGRYCKKYI TNLERIR >Mature_327_residues MEPLIYYPTFEPPTDAWLKFSLLYFENFRPIIPYSRRRLVSDNYTRIIENTDLIRPYSPGADVGYRASLKAIEEVDKIFD RTHDRSLLFNSANLIRKWENSANWNFNVYHEKFSDIWADYCERNNIGRRTENGIMLPEELAFLFMTYLAKEIAFEESAAI ITDNNKYDNFTNYSRSTTPSLNRTTKFAKGIINLLIPKNLADIPFERLIEFRENNRDYLRAFNSELQNIQEKIGEGYSEQ DFINSYNNIYSEFSRQVVLTGIGLASIPFAAYMLIKNPAATAPEYVKEILGALGIALGGGYTLNKGLRDNETGRYCKKYI TNLERIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38014; Mature: 38014
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPLIYYPTFEPPTDAWLKFSLLYFENFRPIIPYSRRRLVSDNYTRIIENTDLIRPYSPG CCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHCCCCCCCCCCCC ADVGYRASLKAIEEVDKIFDRTHDRSLLFNSANLIRKWENSANWNFNVYHEKFSDIWADY CCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHCCCCCCCEEEHHHHHHHHHHHH CERNNIGRRTENGIMLPEELAFLFMTYLAKEIAFEESAAIITDNNKYDNFTNYSRSTTPS HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCC LNRTTKFAKGIINLLIPKNLADIPFERLIEFRENNRDYLRAFNSELQNIQEKIGEGYSEQ HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHH DFINSYNNIYSEFSRQVVLTGIGLASIPFAAYMLIKNPAATAPEYVKEILGALGIALGGG HHHHHHHHHHHHHHCEEHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC YTLNKGLRDNETGRYCKKYITNLERIR EEECCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MEPLIYYPTFEPPTDAWLKFSLLYFENFRPIIPYSRRRLVSDNYTRIIENTDLIRPYSPG CCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHCCCCCCCCCCCC ADVGYRASLKAIEEVDKIFDRTHDRSLLFNSANLIRKWENSANWNFNVYHEKFSDIWADY CCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHCCCCCCCEEEHHHHHHHHHHHH CERNNIGRRTENGIMLPEELAFLFMTYLAKEIAFEESAAIITDNNKYDNFTNYSRSTTPS HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCC LNRTTKFAKGIINLLIPKNLADIPFERLIEFRENNRDYLRAFNSELQNIQEKIGEGYSEQ HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHH DFINSYNNIYSEFSRQVVLTGIGLASIPFAAYMLIKNPAATAPEYVKEILGALGIALGGG HHHHHHHHHHHHHHCEEHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC YTLNKGLRDNETGRYCKKYITNLERIR EEECCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA